an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
(R)-4'-phosphopantothenoyl-L-cysteine
(R)-4'-phosphopantothenate
CO2
4'-phosphopantetheine
5-(methylsulfanyl)-ribulose 1-phosphate
S-methyl-5-thio-α-D-ribose 1-phosphate
3-phosphooxypyruvate
thiamine phosphate
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
L-arginino-succinate
canavaninosuccinate
O-ureido-L-homoserine
3-dehydroshikimate
shikimate
prephenate
H2O
glycerone phosphate
dihydromethanophenazine
CoB-CoM heterodisulfide
methanophenazine
coenzyme B
thiamine diphosphate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
phosphoenolpyruvate
3-phosphonopyruvate
isopentenyl diphosphate
succinate semialdehyde
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
N-acetylglutamyl-phosphate
oxaloacetate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
(R)-mevalonate
carbamoyl phosphate
hydrogen peroxide
(2S)-2-isopropylmalate
3-methyl-2-oxobutanoate
α-D-glucosamine 1-phosphate
(R)-5-phosphomevalonate
prenyl diphosphate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
orotidine 5'-phosphate
arsenite
H2
(S)-3-methyl-2-oxopentanoate
4-methyl-2-oxopentanoate
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
N1-(5-phospho-β-D-ribosyl)glycinamide
2-oxoadipate
5-phospho-β-D-ribosylamine
nicotinate adenine dinucleotide
α-ribazole
α-ribazole 5'-phosphate
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-6-(D-ribitylamino)uracil
L-histidinol phosphate
imidazole acetol-phosphate
N-acetyl-L-glutamate 5-semialdehyde
5-enolpyruvoyl-shikimate 3-phosphate
(S)-4-amino-5-oxopentanoate
porphobilinogen
5-aminolevulinate
L-canavanine
(R)-1-aminopropan-2-ol
(R)-1-amino-2-propanol O-2-phosphate
carbon monoxide
4-amino-4-deoxychorismate
anthranilate
N-(5-phosphoribosyl)-anthranilate
2-oxovalerate
3-ethylmalate
(2S)-2-isopropyl-3-oxosuccinate
(2R,3S)-3-isopropylmalate
3-dehydroquinate
3-deoxy-D-arabino-heptulosonate 7-phosphate
ectoine
(2S)-4-acetamido-2-aminobutanoate
(S)-dihydroorotate
quinolinate
β-nicotinate D-ribonucleotide
1-deoxy-L-glycero-tetrulose 4-phosphate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
(R)-2,3-dihydroxy-3-methylpentanoate
(indol-3 yl)acetyl-CoA
(indol-3-yl)pyruvate
preuroporphyrinogen
histidinol
histidinal
hydrogenobyrinate a,c-diamide
ethanolamine
2-dehydropantoate
2-isopropylmaleate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
shikimate 3-phosphate
citrate
5-methylcytosine
D-erythro-imidazole-glycerol-phosphate
β-D-ribosylnicotinate
coproporphyrinogen III
(R)-pantothenate
xanthine
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
DNA without lesion
oxalate
7,8-didemethyl-8-hydroxy-5-deazariboflavin
hydrogenobyrinate
acetoacetate
4-fumaryl-acetoacetate
citraconate
(2R,3S)-3-methylmalate
crotonate
cyclohex-1,5-diene-1-carbonyl-CoA
6-hydroxycyclohex-1-ene-1-carbonyl-CoA
6-oxocyclohex-1-ene-1-carbonyl-CoA
3-hydroxypimeloyl-CoA
3-oxopimeloyl-CoA
cyclohexane-1-carboxylate
cyclohexane-1-carbonyl-CoA
2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA
hydroxylamine
isochorismate
5-oxo-L-proline
3-ureidopropanoate
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
creatinine
5,6-dimethylbenzimidazole
L-gulono-1,4-lactone
L-xylo-hex-3-ulono-1,4-lactone
α-D-galacturonate 1-phosphate
dialurate
ammonia
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
(2S)-lactyl-2-diphospho-5'-guanosine
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-5-[1-α -D- ribofuranosyl triphosphate]-D-ribitol
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-5-[1-α -D- ribofuranosyl 5-phosphate]-D-ribitol
tryptamine
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
(L-threonylcarbamoyl)adenylate
α-D-ribose 1,5-bisphosphate
hexulose 6-phosphate
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
L-dehydro-ascorbate
2-(sulfomethyl)thiazolidine-4-carboxylate
sulfoethylcysteine
adenosine 5'-phosphosulfate
4-amino-2-methyl-5-pyrimidinemethanol
4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate
4-(β-D-ribofuranosyl)-N-succinylaminobenzene 5'-phosphate
pyruvic oxime
cyclic-2,3-O-oxalyl-L-threonate
dehydroascorbate (bicyclic form)
enol-phenylpyruvate
cyclic- 3,4-O-oxalyl-L-threonate
2,3-dioxo-L-gulonate
2-carboxy-L-xylonolactone
2-carboxy-L-threo-pentonate
(2E,6E)-farnesyl diphosphate
N-acetyl-L-glutaminyl-L-glutamine amide
N-acetyl-L-glutaminyl-L-glutamine
γ-L-glutamyl-L-cysteine
L-alanine
L-leucine
L-isoleucine
L-valine
L-phenylalanine
L-tryptophan
glycine
L-methionine
L-cysteine
L-aspartate
L-glutamate
L-arginine
L-glutamine
L-histidine
L-serine
L-lysine
L-ornithine
L-aspartyl-4-phosphate
L-threonine
L-asparagine
L-2,4-diaminobutanoate
L,L-diaminopimelate
L-tyrosine
N-carbamoyl-L-aspartate
N-acetyl-L-ornithine
L-citrulline
L-homocysteine
S-adenosyl-L-homocysteine
S-adenosyl-L-methionine
L-aspartate 4-semialdehyde
L-homoserine
O-phospho-L-homoserine
L-dopa
meso-diaminopimelate
5-hydroxy-L-tryptophan
N-carbamoylglycine
N-acetyl-L-glutamate
N-acetyl-L-methionine
3-phospho-L-serine
creatine
β-alanine
2-iminobutanoate
2-iminosuccinate
AMP
ATP
ADP
adenylo-succinate
dATP
GTP
dGTP
1-(5-phospho-β-D-ribosyl)-AMP
1-(5-phospho-β-D-ribosyl)-ATP
GMP
dADP
dGDP
GDP
ITP
IDP
dITP
dIDP
IMP
hypoxanthine
XMP
guanosine 3'-monophosphate
adenosine 3'-monophosphate
5'-deoxyadenosine
5-chloro-5-deoxyribose 1-phosphate
5'-chloro-5'-deoxyadenosine
2'-deoxyinosine
2'-deoxyguanosine
2'-deoxyadenosine
cyclic-AMP
dGMP
dAMP
5,6-dihydrothymine
5,6-dihydrouracil
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
ADP-D-ribose
ADP ribose 1''-phosphate
ADP ribose 1'',2''-cyclic phosphate
GDP-α-D-mannose
dTDP-α-D-glucose
dTDP-4-dehydro-β-L-rhamnose
dTDP-β-L-rhamnose
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-glucuronate
UDP-α-D-glucose
UDP-α-D-galactose
UDP-α-D-galactofuranose
UDP-α-D-galacturonate
UDP-N-acetyl-α-D-glucosamine
5'-deoxy-5'-fluoroadenosine
5-fluorocytosine
NAD+
NADP+
NADH
NADPH
adenine
guanine
uracil
cytosine
thymine
dCMP
dTMP
dUMP
dCDP
dTDP
dUDP
dTTP
dCTP
dUTP
CDP
UDP
β-nicotinamide D-ribonucleotide
CTP
UTP
CMP
UMP
cytidine-3'-monophosphate
uridine 3'-monophosphate
2'-deoxyuridine
2'-deoxycytidine
thymidine
adenosine
guanosine
xanthosine
inosine
cytidine
uridine
5-fluorouracil
L-gulonate
aldehydo-L-galactonate
1-(β-D ribofuranosyl)nicotinamide
sucrose 6F-phosphate
D-ribulose-1,5-bisphosphate
5-phospho-α-D-ribose 1-diphosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-erythrose 4-phosphate
α-D-galactose 1-phosphate
α-D-glucopyranose 1-phosphate
α-D-mannose 1-phosphate
N-acetyl-α-D-glucosamine 1-phosphate
β-D-fructofuranose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 6-phosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
β-D-glucose 6-phosphate
α-D-glucose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
5-fluoro-5-deoxy-D-ribose 1-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
D-ribulose 5-phosphate
D-glyceraldehyde 3-phosphate
β-D-fructofuranose
glycolaldehyde
β-D-glucopyranose
α-D-glucopyranose
D-glyceraldehyde
L-glyceraldehyde
glycerol
maltotriose
sucrose
maltohexaose
maltoheptaose
maltopentaose
maltotetraose
aldehydo-D-galacturonate
miraxanthin V
betalamate
(3S)-linalool
(3R)-linalool
geranyl diphosphate
phytyl diphosphate
unsaturated CDP-archaeol
saturated CDP-archaeol
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
di-trans,octa-cis-undecaprenyl diphosphate
geranylgeranyl diphosphate
3-octaprenyl-4-hydroxybenzoate
ethanol
butan-1-ol
methanol
myo-inositol
1D-myo-inositol 3-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 2-monophosphate
2,3-dihydroxybenzoate
dopamine
acetaldehyde
formaldehyde
butan-1-al
methylglyoxal
(R)-acetoin
menadione
diacetyl
acetate
orotate
(R)-pantoate
aldehydo-D-glucuronate
pyruvate
2-oxoglutarate
2-oxobutanoate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
4-aminobenzoate
formate
propanoate
(R)-lactate
(S)-lactate
(S)-2-hydroxyglutarate
(1R,2S)-homoisocitrate
cis-aconitate
D-threo-isocitrate
3-(carbamoylamino)-2-methylpropanoate
chorismate
fumarate
succinate
(S)-malate
4-hydroxybenzoate
2-phenylethylamine
serotonin
menadiol
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
hydrogen cyanide
(indole-3-yl)acetonitrile
tetrahydromethanopterin
(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-D-ribitol
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-D-ribitol 5'-phosphate
6-(hydroxymethyl)-7,8-dihydropterin
7,8-dihydroneopterin
2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate
guanylyl molybdenum cofactor
MoO2-molybdopterin cofactor
7,8-dihydropteroate
7,8-dihydrofolate monoglutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
5-formyl-tetrahydromethanopterin
5,10-methenyltetrahydromethanopterin
N5-methyltetrahydromethanopterin
5,10-methylene-tetrahydromethanopterin
7,8-dihydromethanopterin
demethylated 7,8-dihydromethanopterin
riboflavin
FMN
FMNH2
reduced riboflavin
6,7-dimethyl-8-(1-D-ribityl)lumazine
hydantoin
adenosylcobalamin
sirohydrochlorin
cobyrinate
precorrin-5
precorrin-4
precorrin-6B
precorrin-8x
precorrin-7
cobalt-precorrin-2
precorrin-2
precorrin-1
cobalt-precorrin-5B
cobalt-precorrin-5A
cobalt-precorrin-4
cobalt-precorrin-6A
cobalt-precorrin-6B
cobalt-precorrin-8
cobalt-precorrin-7
cobalt-precorrin-3
precorrin-3A
precorrin-3B
precorrin-6A
nicotinate
L-ascorbate
pyridoxal 5'-phosphate
pyridoxine 5'-phosphate
pyridoxamine 5'-phosphate
coenzyme M
coenzyme A
methyl-CoM
oxidized coenzyme F420-0
trimethyl sulfonium
sulfate
sulfite
thiosulfate
hydrogensulfite
hydrogencarbonate
superoxide
phosphate
diphosphate
triphosphate
Fe3+
Cu2+
Co2+
Mg2+
Fe2+
ammonium
H+
dimethyl sulfide
sulfoacetaldehyde
3-sulfopyruvate
L-cysteate
4-methyl-5-(2-phosphooxyethyl)thiazole
5-(2-hydroxyethyl)-4-methylthiazole
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
thiocyanate
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
agmatine
spermidine
dehydrospermidine
(2Z)-2-aminobut-2-enoate
2-octaprenylphenol
5,10-methenyltetrahydrofolate mono-L-glutamate
(R)-citramalate
(2R)-2,3-dihydroxy-3-methylbutanoate
(2S)-2-phospholactate
3-phospho-D-glyceroyl-phosphate
3-phospho-D-glycerate
2-phospho-D-glycerate
sn-glycerol 1-phosphate
sn-glycerol 3-phosphate
(R)-NADHX
(S)-NADHX
(S)-3-hydroxy-3-methylglutaryl-CoA
acetyl-CoA
malonyl-CoA
phenylacetyl-CoA
isobutanoyl-CoA
succinyl-CoA
(E)-glutaconyl-CoA
glutaryl-CoA
4-hydroxybenzoyl-CoA
3'-dephospho-CoA
acetoacetyl-CoA
propanoyl-CoA
(S)-3-hydroxybutanoyl-CoA
crotonyl-CoA
L-galactono-1,4-lactone
oxygen
hydrogen sulfide
Mg-protoporphyrin
protoporphyrin IX
protoporphyrinogen IX
uroporphyrinogen-III
uroporphyrinogen-I
siroheme
N2
adenosylcobyrate
adenosyl-cob(III)yrinate a,c-diamide
adenosylcobalamin 5'-phosphate
adenosylcobinamide-GDP
adenosylcobinamide
adenosyl-cobinamide phosphate
cob(II)yrinate a,c-diamide
cobalt-sirohydrochlorin
cob(II)yrinate c-monoamide
cob(I)inamide
cobalt-factor III
cob(I)yrinate a,c-diamide
phosphonoacetaldehyde
ethylphosphate
phenylacetate
DNA with lesion
monodehydroascorbate radical
(indol-3-yl)acetate
methane
5-amino-4-imidazolecarboxyamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
Coα-[α-(5-methylbenzimidazolyl)]-Coβ-adenosylcobamide 5'-phosphate
Coα-[α-(5-methylbenzimidazolyl)]-Coβ-adenosylcobamide