an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N-acetyl-L,L-2,6-diaminopimelate

N²-acetyl-L-2-aminoadipate semialdehyde

3-methyl-2-butenal

N⁵-carboxyaminoimidazole ribonucleotide

(R)-4'-phosphopantothenate

1,2,3,5-tetrahydroxybenzene

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

acetoacetate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

α-D-ribose 1,5-bisphosphate

L-histidinol phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

3-hydroxypropanoate

(R)-4'-phosphopantothenoyl-L-cysteine

O-phosphoethanolamine

hexulose 6-phosphate

histidinal

S-sulfoglutathione

N-(5-phosphoribosyl)-anthranilate

carbon monoxide

rosmarinate

5-aminolevulinate

phosphoenolpyruvate

porphobilinogen

4-methyl-2-oxopentanoate

N-tetradecanoylglycyl-peptide

L-β-lysine

1,4-dihydroxy-2-naphthoate

2-C-methyl-D-erythritol 4-phosphate

3-sulfinopyruvate

hydrogen peroxide

dimethylarsinous acid

D-erythro-imidazole-glycerol-phosphate

histidinol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(R)-pantothenate

3-dehydroshikimate

prephenate

hydrogen selenide

preuroporphyrinogen

3-oxopropanoate

(R)-3-(3,4-dihydroxyphenyl)lactate

glycerone phosphate

arsenite

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

palmitaldehyde

isochorismate

(S)-5-amino-3-oxohexanoate

3-methyl-2-oxobutanoate

S-prenyl-L-cysteine

shikimate

CDP-N-methylethanolamine

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

3-acetoacetyl-CoA

2-succinylbenzoate

oxaloacetate

gallate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3-dehydroquinate

cacodylate

isopentenyl diphosphate

(S)-2,3-dihydrodipicolinate

(S)-2-aceto-2-hydroxybutanoate

quinolinate

4-amino-4-deoxychorismate

1,4-dihydroxy-2-naphthoyl-CoA

(S)-2-amino-6-oxohexanoate

N-succinyl-2-amino-6-ketopimelate

N²-acetyl-α-aminoadipate

O-acetyl-L-serine

ethanolamine

3-(3,4-dihydroxyphenyl)pyruvate

selenophosphate

3-hydroxy-5-oxohexanoate

D-gluconate 6-phosphate

dihydrolipoamide

dihydrophloroglucinol

α-D-glucuronate 1-phosphate

α-D-glucosamine 1-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

CDP-N-dimethylethanolamine

methylarsonate

α-D-galacturonate 1-phosphate

citrate

glycyl-peptide

pseudouridine 5'-phosphate

imidazole acetol-phosphate

γ-L-glutamyl 5-phosphate

3'-phosphoadenylyl-sulfate

3-hydroxy-5- oxohexanoyl-CoA

H₂

3-mercaptopyruvate

β-nicotinate D-ribonucleotide

lipoamide

carbamoyl phosphate

N²-acetyl-L-Lysine

xanthine

adenosine 3',5'-bisphosphate

(3S,5S)-3,5-diaminohexanoate

orotidine 5'-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N²acetyl-L-2-aminoadipate 6-phosphate

CO₂

5-oxo-L-proline

acetyl phosphate

(S)-3-methyl-2-oxopentanoate

2-dehydropantoate

ammonia

glutathione disulfide

2-oxoadipate

hydroxypyruvate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

L-dehydro-ascorbate

6-phospho D-glucono-1,5-lactone

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

butanoyl phosphate

(S)-dihydroorotate

(R)-mevalonate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

coproporphyrinogen III

pyrogallol

N-dimethylethanolamine phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

(R)-5-phosphomevalonate

4-aminobutanoate

succinate semialdehyde

urea

N-succinyl-L,L-2,6-diaminopimelate

adenosine 5'-phosphoramidate

(S)-4-amino-5-oxopentanoate

methylarsonite

phloroglucinol

3-phosphooxypyruvate

prenyl diphosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

shikimate 3-phosphate

5-phospho-β-D-ribosylamine

phosphocholine

H₂O

(R)-mevalonate diphosphate

mesaconate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

anthranilate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N-methylethanolamine phosphate

1-piperideine 6-carboxylate

nicotinate adenine dinucleotide

adenosine 5'-phosphosulfate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

4'-phosphopantetheine

5-enolpyruvoyl-shikimate 3-phosphate

cis-zeatin riboside monophosphate

cis-zeatin riboside

enterobactin

solavetivone

geranyl diphosphate

(-)-vetispiradiene

(2E,6E)-farnesyl diphosphate

3-hydroxy-15-dihydrolubimin

15-hydroxysolavetivone

2-dehydrolubimin

rishitin

3-hydroxylubimin

lubimin

4-hydroxybenzoate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

demethylmenaquinol-8

3-demethylubiquinol-8

menaquinol-8

ubiquinol-8

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-nitrophenol

2,3-dihydroxybenzoate

4-aminobenzoate

L-dopa

dopamine

(R)-adrenaline

(R)-noradrenaline

4-nitrophenyl phosphate

maltotriose

D-ribulose-1,5-bisphosphate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

UDP-D-galactose

UDP-D-apiose

UDP-4-dehydro-6-deoxy-α-D-glucose

UDP-β-L-rhamnose

UDP-α-D-galacturonate

UDP-α-D-glucuronate

UDP-α-D-xylose

UDP-N-acetyl-α-D-glucosamine

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-rhamnose

GDP-β-L-gulose

GDP-α-D-mannose

GDP-β-L-galactose

ADP-D-ribose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

β-L-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

α-D-ribose-1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

β-D-fructofuranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

sucrose 6^F-phosphate

glycerol

β-L-galactopyranose

β-D-ribopyranose

β-D-glucopyranose

α-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribofuranose

glycolaldehyde

N-acetyl-β-D-mannosamine

β-D-fructofuranose

maltotetraose

sucrose

melibiose

D-gluconate

sn-glycerol 3-phosphate

(R)-2-hydroxyglutarate

glutathione-sulfide

choline

cadaverine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

S-methyl-L-methionine

dimethyl sulfide

3-sulfino-L-alanine

glutathione

thiocyanate

S-sulfanylglutathione

(R)-S-lactoylglutathione

(S)-3-hydroxy-isobutanoate

hydrogen sulfide

oxygen

3-(all-trans-octaprenyl)benzene-1,2-diol

hydrogen cyanide

cyclic-AMP

GMP

adenylo-succinate

GTP

GDP

dGDP

IMP

XMP

ATP

ADP

hypoxanthine

dGMP

1-(5-phospho-β-D-ribosyl)-ATP

dATP

AMP

1-(5-phospho-β-D-ribosyl)-AMP

dADP

dGTP

NADPH

NADH

NADP⁺

NAD⁺

dCTP

dUTP

dTTP

CTP

UTP

dTMP

dCMP

dUMP

dUDP

dTDP

dCDP

CMP

UMP

UDP

CDP

β-nicotinamide D-ribonucleotide

CDP-ethanolamine

CDP-choline

guanine

adenine

uracil

cytosine

guanosine

xanthosine

inosine

adenosine

thymidine

2'-deoxycytidine

2'-deoxyuridine

cytidine

uridine

P¹,P³-bis(5'-adenosyl) triphosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

(R)-glycerate

2-phospho-D-glycerate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

octanoate

palmitate

butanoate

cis-homoaconitate

(2R)-homocitrate

(1R,2S)-homoisocitrate

cis-aconitate

D-threo-isocitrate

acetate

pyruvate

formate

propanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

β-alanine

(S)-3-amino-2-methylpropanoate

L-lysine

L-arginine

L-histidine

L-glutamate

L-aspartate

L-glutamine

L-asparagine

L-threonine

L-tyrosine

glycine

L-cysteine

L-serine

L-phenylalanine

L-tryptophan

L-aspartyl-4-phosphate

L-saccharopine

O-acetyl-L-homoserine

(2S, 3S)-3-methylaspartate

3-phospho-L-serine

N-acetyl-L-ornithine

N-acetyl-L-glutamate

L-2-acetamido-6-oxoheptanedioate

N-carbamoyl-L-aspartate

L-cystathionine

L,L-diaminopimelate

L-alanine

L-proline

L-valine

L-leucine

L-isoleucine

L-ornithine

L-methionine

L-citrulline

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

L-homocysteine

O-succinyl-L-homoserine

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

L-homoserine

meso-diaminopimelate

chorismate

succinate

fumarate

(S)-malate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

trimethyl sulfonium

Cu²⁺

Fe²⁺

Ca²⁺

H⁺

OH^-

superoxide

sulfate

sulfite

hydrogencarbonate

phosphate

diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

N-acetyl-D-mannosamine 6-phosphate

coenzyme A

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

tetrahydrofolate-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

monodehydroascorbate radical

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

protoheme

L-ascorbate

nicotinamide

nicotinate

(S)-methylmalonate-semialdehyde

ubiquinone-8

methylglyoxal

acetaldehyde

formaldehyde

1-octanal

5,10-methenyltetrahydrofolate mono-L-glutamate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

dipicolinate

FAD

FADH₂

7,8-dihydroneopterin 3'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

(S)-citramalate

2-methoxy-6-(all-trans-octaprenyl)phenol

L-galactono-1,4-lactone

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

2-methylbutanoyl-CoA

succinyl-CoA

(S)-3-aminobutanoyl-CoA

trans-caffeoyl-CoA

glutaryl-CoA

malonyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

4-hydroxybutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isovaleryl-CoA

vinylacetyl-CoA

acetyl-CoA

3-methylcrotonyl-CoA

3-hydroxypropanoyl-CoA

3-methylglutaconyl-CoA

acryloyl-CoA

2-methylacetoacetyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

crotonyl-CoA

propanoyl-CoA

butanoyl-CoA

acetoacetyl-CoA

octanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

palmitoyl-CoA

myristoyl-CoA

(S)-malyl-CoA

1-octanol

myo-inositol

1D-myo-inositol 3-monophosphate

phytosphingosine

3-dehydrosphinganine

phytosphingosine 1-phosphate

sphinganine 1-phosphate

ethanol

2-octaprenylphenol

2-iminosuccinate