an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

L-dehydro-ascorbate

pseudouridine

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

2-keto-D-gluconate

2-dehydro-6-phospho-D-gluconate

L-xylo-hex-3-ulono-1,4-lactone

5-oxo-L-proline

N⁵-carboxyaminoimidazole ribonucleotide

vanillin

formamide

selenodiglutathione

glutathioselenol

α-D-galacturonate 1-phosphate

4-amino-2-methyl-5-pyrimidinemethanol

1,4-dihydroxy-2-naphthoate

dialurate

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

crotonate

3'-ketosucrose

N²-succinyl-L-arginine

creatinine

H₂

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

hydroxypyruvate

acetyl phosphate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

4-aminobutanoate

2-pyrone-4,6-dicarboxylate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

5-amino-6-(5-phospho-D-ribitylamino)uracil

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

pyruvic oxime

ammonia

hydroxylamine

4-pyridoxolactone

31-O-desmethylFK-506

FK-506

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

1-deoxy-L-glycero-tetrulose 4-phosphate

chloroacetaldehyde

glutathionylspermidine

2-keto-L-gulonate

nitrilotriacetate

iminodiacetate

xanthine

2-iminoacetate

2-maleylacetate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

(R)-4'-phosphopantothenate

histidinal

histidinol

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

3-oxocholoyl-CoA

allopregnanolone

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(4S)-4-hydroxy-2-oxoheptanedioate

succinate semialdehyde

(4-hydroxyphenyl)acetate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

2-dehydro-3-deoxy-D-gluconate

L-thyroxine phenolic β-D-glucuronide

L-thyroxine acyl β-D-glucuronide

5-hydroxytryptophol glucuronide

N-acetyl-serotonin glucuronide

cotinine

cotinine-glucuronide

nicotine-glucuronide

methylamine

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

DNA without lesion

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

malonate

(S)-2-amino-6-oxohexanoate

α-D-glucopyranosyl-diphosphoundecaprenol

ethanolamine

(indol-3-yl)pyruvate

(S)-dihydroorotate

S-methyl-5'-thioadenosine

aminoacetone

3-deoxy-α-D-manno-2-octulosonate

lipid IV_A

3-deoxy-D-glycero-2,5-hexodiulosonate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

L-arogenate

(R)-3-methylitaconate

dimethylmaleate

porphobilinogen

shikimate

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

polyneuridine aldehyde

16-epivellosimine

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

2-aminomalonate semialdehyde

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

preuroporphyrinogen

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2-protocatechuoylphloroglucinolcarboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

(S)-ureidoglycolate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

hydrogen selenide

O-acetyl-L-serine

O-ureido-L-homoserine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

canavaninosuccinate

L-arginino-succinate

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

glutathione disulfide

L-canavanine

(2-hydroxyphenyl)acetate

homogentisate

N-Formyl-L-kynurenine

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

L-histidinol phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

carbon monoxide

2-oxoadipate

carbamoyl phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

N²-succinyl-L-ornithine

N²-succinyl-L-glutamate 5-semialdehyde

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

coproporphyrinogen III

citrate

3-demethylubiquinol-6

shikimate 3-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

4-imidazolone-5-propanoate

urocanate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

(S)-3-methyl-2-oxopentanoate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

methylsalicylate

salicyl alcohol

pimeloyl-CoA

5-enolpyruvoyl-shikimate 3-phosphate

α-D-glucosamine 1-phosphate

glycerone phosphate

quinolinate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N-succinyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

lipid X

lipid A disaccharide (E. coli)

2-aminoacetaldehyde

orotidine 5'-phosphate

thiamine phosphate

CDP-glycerol

poly (glycerol phosphate)

oxalosuccinate

prenyl diphosphate

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

prephenate

2-phosphoglycolate

glycolate

dethiobiotin

acetoacetate

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

L-selenocystathionine

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

4-amino-4-deoxychorismate

4-hydroxy-2-nonenal

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

carbonic acid

arsenite

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N-(5-phosphoribosyl)-anthranilate

anthranilate

S-adenosyl 3-(methylsulfanyl)propylamine

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-dehydroquinate

3-dehydroshikimate

3-deoxy-D-arabino-heptulosonate 7-phosphate

L-gulono-1,4-lactone

3-hydroxypropanoate

3-oxopropanoate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

oxaloacetate

diethylphosphate

dimethylthiophosphate

diethylthiophosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

D-gluconate 6-phosphate

S-formylglutathione

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

3-keto-β-D-galactose

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

N-acetyl-β-glucosaminylamine

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

hydrogen peroxide

pseudouridine 5'-phosphate

dopamine 3-O-sulfate

N-acetyl-serotonin sulfate

6-hydroxymelatonin

6-sulfatoxymelatonin

5-hydroxytryptophol

5-hydroxytryptophol sulfate

serotonin O-sulfate

3'-phosphoadenylyl-sulfate

adenosine 3',5'-bisphosphate

3-phosphooxypyruvate

3-amino-1-hydroxyacetone 1-phosphate

urea

urea-1-carboxylate

3-deoxy-D-manno-octulosonate 8-phosphate

phosphoenolpyruvate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

3-methyl-2-oxobutanoate

2-dehydropantoate

(R)-pantothenate

CO₂

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

4-oxoglutaramate

1-piperideine 6-carboxylate

vellosimine

butanoyl phosphate

(2E,6E)-farnesyl diphosphate

pristanate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

adenosylcobalamin

cob(I)alamin

cob(II)yrinate a,c-diamide

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobyrate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

Mg-protoporphyrin

protoheme

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

(Z,Z)-biliverdin-IX α

siroheme

hydrogen sulfide

oxygen

2-chloroacetate

trans,octacis-decaprenylphospho-β-D-ribofuranose

trans,octacis-decaprenylphospho-β-D-erythro-pentofuranosid-2-ulose

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

superoxide

hydroxyl radical

monodehydroascorbate radical

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

paraoxon

parathion

4-nitrophenol

S-(hydroxymethyl)glutathione

dimethyl sulfide

S-methyl-L-methionine

glutathione

thiocyanate

methanethiol

3-(methylsulfanyl)propanoate

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

Fe²⁺

Mg²⁺

ammonium

H⁺

K⁺

glycine betaine

betaine aldehyde hydrate

betaine aldehyde

choline

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

putrescine

spermidine

tyramine

N-acetyl-serotonin

serotonin

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

tetraiodothyroacetate ether glucuronide

tetraiodothyroacetate

tetraiodothyroacetate ester glucuronide

triiodothyroacetate ester glucuronide

3,3',5-triiodothyroacetate

triiodothyroacetate ether glucuronide

3,5,3'-triiodo-L-thyronine

triiodothyronine sulfate

thyroxine sulfate

L-thyroxine

3-chlorobenzaldehyde

3-chlorobenzoate

acetamide

(S)-(+)-allantoin

L-proline amide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-piperazine-2-carboxamide

nicotinamide

ethene

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

5-α-pregnane-3,20-dione

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

testosterone

17-β-hydroxy-5-α-androstan-3-one

7α-hydroxy-5β-cholestan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

androst-4-ene-3,17-dione

5α-androstane-3,17-dione

isocholate

glycocholate

deoxycholate

cholate

3-dehydrocholate

androsterone

5β-cholestane-3α,7α-diol

5β-cholestane-3α,7α,12α-triol

5-α-androstan-3α,17β-diol

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

choloyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3S)-hydroxyadipyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

3-hydroxypropanoyl-CoA

acryloyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

succinyl-CoA

malonyl-CoA

acetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

all-trans-retinyl palmitate

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-galactono-1,4-lactone

D-glucono-1,5-lactone

mycophenolic acid O-acyl-glucuronide

mycophenolic acid phenolic glucuronide

tributyrin

1,2-dibutyrin

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

nicotinate

L-ascorbate

thiamine

riboflavin

4-pyridoxate

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

guanosine

inosine

xanthosine

adenosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

IMP

XMP

AMP

ITP

GTP

ATP

dCMP

orotate

dTMP

dUMP

UDP

dUDP

dUTP

dTDP

dTTP

dCDP

dCTP

CDP

uracil

UTP

CTP

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

CMP

UMP

isoguanine

preQ₁

quercetin

(indole-3-yl)acetonitrile

acrylonitrile

preQ₀

salicylaldehyde

urate

3-hexaprenyl-4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

methyl parathion

amino-parathion

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

4-aminophenol

4-methylphenol

2,3-dihydroxybenzoate

3,4-dihydroxyphenylacetate

protocatechuate

dopamine

5-chloroprotocatechuate

vanillate

salicylate

4-aminobenzoate

benzoate

L-2-aminoadipate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-serine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

L-leucine

L-proline

glycine

L-glutamine

L-alanine

D-glutamate

L-glutamate

L-arginine

L-lysine

L-histidine

L-aspartate

L-tyrosine

L-threonine

L-asparagine

L-cysteine

L-tryptophan

L-phenylalanine

D-aspartate

cis-4-hydroxy-D-proline

D-alanine

L-saccharopine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

seleno-L-homocysteine

sarcosine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

L-homoserine

L-canaline

L-ornithine

L-aspartate 4-semialdehyde

L-homocysteine

hypoglycin A

O-succinyl-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L,L-diaminopimelate

L-cystathionine

L-isoglutamine

chorismate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

(S)-malate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(2S,3S)-2-methylcitrate

cis-aconitate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

3-oxoadipate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

stearate

palmitate

D-mannonate

mycophenolate

(S)-piperazine-2-carboxylate

D-gluconate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

a coenzyme-A group

methylglyoxal

diacetyl

pyrroloquinoline quinone

3-(N-morpholino)propanal

glycolaldehyde

1-octanal

butan-1-al

acetaldehyde

formaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

L-sorbosone

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

methanol

ethanol

phytol

glycerol

D-sorbitol

galactitol

myo-inositol

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

oleanolate

oleanolate 3 β-D-glucuronoside

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-glucosyluronate-Kdo₂-lipid A-phosphate

α-Kdo-(2→6)-lipid IV_A

trans-3'-hydroxycotinine

trans-3-hydroxycotinine-glucuronide

(S)-nicotine

iron(III) dicitrate

ferric-enterobactin complex

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

allolactose

sucrose

α,α-trehalose

α-lactose

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

D-xylulose

3-dehydro-D-glucopyranose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

sucrose 6^G-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

D-galactonate

D-altronate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

pppGpp

ppGpp

adenylo-succinate

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B