an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

5-hydroxyindole thiazolidine carboxylate

ammonia

4-oxoglutaramate

formamide

5-amino-6-(5-phospho-D-ribitylamino)uracil

N-acetyl-D-muramate 6-phosphate

(S)-dihydroorotate

L-histidinol phosphate

H₂

α-D-glucopyranosyl-diphosphoundecaprenol

carboxynorspermidine

norspermidine

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

L-selenocystathionine

enol-phenylpyruvate

chloramphenicol

ethanolamine

mesaconate

α-D-glucosamine 1-phosphate

carbonic acid

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

propanoyl phosphate

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

4-acetamidobutanal

4-acetamidobutanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

dimethylsulfoniopropanoate

N-succinyl-L,L-2,6-diaminopimelate

2-amino-3-carboxymuconate-6-semialdehyde

DNA without lesion

γ-L-glutamyl 5-phosphate

butanoyl phosphate

adenosine 3',5'-bisphosphate

5-enolpyruvoyl-shikimate 3-phosphate

1,4-dihydroxy-2-naphthoate

4'-phosphopantetheine

oxaloacetate

hydrogen peroxide

L-β-lysine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

aminoacetone

phosphoenolpyruvate

oxalosuccinate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

citrate

acetoacetate

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

(2S)-2-isopropylmalate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

acetyl phosphate

lipid X

β-D-ribosylnicotinate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

glycerone phosphate

isopentenyl diphosphate

3-amino-1-hydroxyacetone 1-phosphate

4-amino-4-deoxychorismate

3-methyl-2-oxobutanoate

ADP-L-glycero-β-D-manno-heptose

hydrogen selenide

O-acetyl-L-serine

N-Formyl-L-kynurenine

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

orotidine 5'-phosphate

carbamoyl phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

urea

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

quinolinate

thiamine phosphate

thiamine diphosphate

lipid A disaccharide (E. coli)

lipid IV_A

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

5-amino-6-(D-ribitylamino)uracil

2-dehydropantoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

prephenate

shikimate 3-phosphate

CO₂

4-aminobutanoate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

histidinal

histidinol

urocanate

4-imidazolone-5-propanoate

preuroporphyrinogen

5-methylcytosine

3-deoxy-D-manno-octulosonate 8-phosphate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

shikimate

3-dehydroshikimate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

H₂O

5-amino-6-(5-phospho-D-ribosylamino)uracil

(S)-3-methyl-2-oxopentanoate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

coenzyme F₃₉₀-A

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

coproporphyrinogen III

L-canavanine

(L-threonylcarbamoyl)adenylate

methanophenazine

luteolin 7-O-β-D-glucuronide

coenzyme B

CoB-CoM heterodisulfide

dihydromethanophenazine

dihydroxyacetone

N⁵-carboxyaminoimidazole ribonucleotide

4-methyl-2-oxopentanoate

(R)-4'-phosphopantothenate

5-hydroxytryptophol

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

3-deoxy-α-D-manno-2-octulosonate

nigerose

(R)-pantothenate

xanthine

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

3-keto-β-D-galactose

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-diglucuronide

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2-chloroethanol

chloroacetaldehyde

DNA with lesion

ethylphosphate

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

protoheme

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

CMP-N-acetyl-β-neuraminate

(S)-citramalate

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

L-homocysteine

choline

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

fluoroacetaldehyde

fluoroacetate

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

superoxide

2-iminobutanoate

2-iminosuccinate

coprostanone

cholest-4-en-3-one

4,5α-dihydrocortisone

cortisone

5-α-pregnane-3,20-dione

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

progesterone

17-β-hydroxy-5-α-androstan-3-one

testosterone

3-dehydrocholate

isocholate

glycocholate

cholate

(indol-3-yl)acetate

succinyl-CoA

3'-dephospho-CoA

malonyl-CoA

(S)-3-aminobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

oleoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

propanoyl-CoA

butanoyl-CoA

acetoacetyl-CoA

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinol

ubiquinol-9

ubiquinol-7

ubiquinol-10

ubiquinol-8

menaquinol-7

menaquinol-10

menaquinol-11

menaquinol-12

menaquinol-13

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-8

caldariellaquinone

chloramphenicol 3-acetate

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-β-neuraminate

methylglyoxal

menadione

salicylaldehyde

(2E,6E)-farnesal

glycolaldehyde

1-octanal

acetaldehyde

butan-1-al

1-propanal

isobutanal

formaldehyde

(R)-lactaldehyde

phytenal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

coenzyme A

coenzyme M

oxidized coenzyme F₄₂₀-2

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

riboflavin

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

3-sulfino-L-alanine

methanethiol

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

(S)-1-pyrroline-5-carboxylate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

inosine

xanthosine

guanosine

adenosine

hypoxanthine

dAMP

dGMP

dIMP

dITP

dATP

dGTP

dADP

dGDP

GDP

ADP

XMP

IMP

AMP

GMP

GTP

XTP

ITP

ATP

dUDP

dUTP

UDP

dTTP

dCTP

UTP

CTP

dTMP

dUMP

uracil

uridine 3'-monophosphate

cytidine-3'-monophosphate

orotate

CDP

dCDP

cytosine

dCMP

dTDP

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

uridine

cytidine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

UMP

CMP

preQ₁

luteolin

Fe²⁺

Mg²⁺

ammonium

H⁺

trimethyl sulfonium

sulfite

hydrogencarbonate

thiosulfate

phosphate

triphosphate

diphosphate

preQ₀

urate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

4-tyrosol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

(indol-3-yl)acetaldehyde

indole

menadiol

salicylate

benzoate

4-aminobenzoate

chorismate

succinate

fumarate

L-aspartate

(S)-malate

D-glucarate

cis-homoaconitate

cis-aconitate

(2R)-homocitrate

D-threo-isocitrate

(S)-lactate

(R)-lactate

propanoate

formate

pyruvate

acetate

butanoate

octanoate

(2E,6E)-farnesoate

(R)-pantoate

β-D-glucuronate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

2-oxoglutarate

oleate

phytenate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

L-leucine

glycine

L-glutamine

L-alanine

L-proline

D-glutamate

L-glutamate

L-lysine

L-arginine

L-histidine

L-tyrosine

L-tryptophan

L-phenylalanine

D-alanine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

3-phospho-L-serine

(2S, 3S)-3-methylaspartate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-threonine

L-asparagine

L-cysteine

L-citrulline

L-isoleucine

L-valine

O-succinyl-L-homoserine

L-ornithine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

O-phospho-L-homoserine

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

L-homoserine

L-aspartate 4-semialdehyde

meso-diaminopimelate

L-selenocysteine

L-methionine

L-isoglutamine

L-cystathionine

L,L-diaminopimelate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

D-mannitol 1-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-tridecaprenyl diphosphate

all-trans-dodecaprenyl diphosphate

all-trans-undecaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

1-(β-D ribofuranosyl)nicotinamide

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

raffinose

maltotriose

stachyose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

α-maltose

melibiose

sucrose

allolactose

α,α-trehalose

α-lactose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

keto-D-fructose

β-D-fructofuranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

6-deoxy-5-ketofructose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

5'-deoxyadenosine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

β-nicotinamide D-ribonucleotide