an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
D-erythro-imidazole-glycerol-phosphate
histidinol
histidinal
3-dehydroquinate
(R)-4-phosphopantoate
(R)-4'-phosphopantothenate
(R)-mevalonate diphosphate
2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA
cyclohexane-1-carbonyl-CoA
cyclohexane-1-carboxylate
3-oxopimeloyl-CoA
3-hydroxypimeloyl-CoA
6-oxocyclohex-1-ene-1-carbonyl-CoA
6-hydroxycyclohex-1-ene-1-carbonyl-CoA
cyclohex-1,5-diene-1-carbonyl-CoA
crotonate
carbon monoxide
2-(α-hydroxyethyl)thiamine diphosphate
L-arginino-succinate
H2
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one
dialurate
(R)-1-amino-2-propanol O-2-phosphate
2,5-dioxopentanoate
2-dehydro-3-deoxy-D-arabinonate
D-xylonate
4,8,12-trimethyltridecanoyl-CoA
3-oxopristanoyl-CoA
D-xylono-1,5-lactone
5,6-dimethylbenzimidazole
(R)-1-aminopropan-2-ol
α-ribazole
α-ribazole 5'-phosphate
pseudouridine 5'-phosphate
coenzyme B
methanophenazine
CoB-CoM heterodisulfide
dihydromethanophenazine
2-phosphoglycolate
4-fumaryl-acetoacetate
L-canavanine
(indol-3-yl)pyruvate
(indol-3 yl)acetyl-CoA
acetoacetate
31-O-desmethylFK-506
FK-506
4-amino-4-deoxychorismate
imidazole acetaldehyde
4-imidazoleacetate
5-hydroxyindole acetate
3,4-dihydroxyphenylacetaldehyde
prop-2-ynal
propynoate
D-glucurono-6,3-lactone
4-acetamidobutanal
4-acetamidobutanoate
dimethylsulfoniopropanoate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
1-deoxy-L-glycero-tetrulose 4-phosphate
5-amino-6-(D-ribitylamino)uracil
4-prenylphlorisobutyrophenone
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
isopentenyl phosphate
(S)-2-amino-6-oxohexanoate
2-dehydro-3-deoxy-D-gluconate
D-gluconate 6-phosphate
hexulose 6-phosphate
(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate
2-succinylbenzoate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
benzoylsuccinyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA
3-oxo-3-phenylpropanoyl-CoA
β-L-arabinose 1-phosphate
thiamine phosphate
thiamine diphosphate
1,4-dihydroxy-2-naphthoate
coproporphyrinogen III
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
adenosine 5'-phosphoselenate
adenosine 5'-phosphosulfate
3'-phosphoadenylyl-sulfate
glycolate
urea
imidazole acetol-phosphate
L-histidinol phosphate
nicotinate adenine dinucleotide
prenyl diphosphate
3-oxopropanoate
4-aminobutanoate
succinate semialdehyde
hydrogen peroxide
4-imidazolone-5-propanoate
urocanate
α-D-glucosamine 1-phosphate
hydrogen selenide
O-acetyl-L-serine
oxalosuccinate
enol-phenylpyruvate
isochorismate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
dihydrolipoamide
S-acetyldihydrolipoamide
(S)-dihydroorotate
carbamoyl phosphate
orotidine 5'-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
5-deoxy-α-ribose 1-phosphate
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
S-adenosyl 3-(methylsulfanyl)propylamine
2-phenylethanol
2-methylbutanol
2-methylbutanal
3-methylbutanol
3-methylbutanal
isobutanol
indole-3-glycol
indole-3-glycol aldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
5-amino-6-(5-phospho-D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribosylamino)uracil
porphobilinogen
preuroporphyrinogen
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
3-methyl-2-oxobutanoate
2-dehydropantoate
β-nicotinate D-ribonucleotide
β-D-ribosylnicotinate
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
isopentenyl diphosphate
4-amino-2-methyl-5-pyrimidinemethanol
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
glycerone phosphate
CO2
N-acetyl-D-galactosamine 6-phosphate
D-galactosamine-6-phosphate
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-aceto-2-hydroxybutanoate
(S)-2-acetolactate
cis-coumarinic acid-β-D-glucoside
scopolin
4-hydroxybenzaldehyde
4-methylumbelliferyl glucoside
3-keto-β-D-galactose
2,3-didehydroadipyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
(E)-4-coumaroyl-CoA
oxaloacetate
citrate
(R)-mevalonate
(R)-5-phosphomevalonate
phosphoenolpyruvate
creatinine
H2O
5-hydroxyindole thiazolidine carboxylate
ammonia
1-piperideine 6-carboxylate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
shikimate
3-dehydroshikimate
shikimate 3-phosphate
3-phosphooxypyruvate
coenzyme M
coenzyme A
MoO2-molybdopterin cofactor
guanylyl molybdenum cofactor
7,8-dihydrofolate monoglutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
riboflavin
nicotinate
menadione
dUMP
dCMP
orotate
UTP
dUTP
dTTP
dCTP
CTP
dUDP
UDP
dCDP
CDP
dTMP
dTDP
uracil
UDP-α-D-galactofuranose
UDP-α-D-galactose
UDP-α-D-glucose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-β-L-arabinopyranose
UDP-N-acetyl-α-D-glucosamine
dTDP-β-L-rhamnose
dTDP-4-dehydro-β-L-rhamnose
dTDP-α-D-glucose
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
cytidine
uridine
thymidine
2'-deoxycytidine
2'-deoxyuridine
thymine
CMP
UMP
hypoxanthine
adenine
precorrin-1
precorrin-2
sirohydrochlorin
cob(I)alamin
adenosylcobalamin
6,7-dimethyl-8-(1-D-ribityl)lumazine
FMNH2
FAD
FMN
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
7,8-dihydropteroate
(S)-1-pyrroline-5-carboxylate
2'-deoxyadenosine
2'-deoxyguanosine
guanosine
inosine
xanthosine
adenosine
dAMP
dGMP
dITP
dGTP
dATP
dIDP
dGDP
dADP
IDP
GDP
ADP
GMP
IMP
XMP
AMP
ITP
GTP
ATP
scopoletin
coumarin
4-methylumbelliferone
neolinustatin
lotaustralin
linustatin
linamarin
taxiphyllin
hydrogen cyanide
2-hydroxy-2-methylpropanenitrile
(2R)-2-hydroxy-2-methylbutanenitrile
4-tyrosol
coumarinate
4-aminobenzoate
vanillyl mandelate
3-methoxy-4-hydroxyphenylglycol
phenylacetaldehyde
(4-hydroxyphenyl)acetaldehyde
(indol-3-yl)acetaldehyde
menadiol
caldariellaquinol
demethylmenaquinol-8
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
tyramine
3,4-dihydroxymandelate
3,4-dihydroxyphenylacetate
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
3-phenyl-2-oxopropanoate
glyoxylate
2-oxobutanoate
2-oxoglutarate
pyruvate
L-citrulline
L-methionine
L-valine
L-arginine
L-phenylalanine
L-proline
L-aspartate
L-asparagine
L-leucine
L-serine
glycine
L-threonine
L-tyrosine
L-glutamine
L-glutamate
L-histidine
L-cysteine
L-homoserine
L-canaline
L-ornithine
O-phospho-L-homoserine
S-sulfo-L-cysteine
L-homocysteine
O-succinyl-L-homoserine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-glutamate-5-semialdehyde
L-selenocysteine
L-cystathionine
N-formimino-L-glutamate
N-carbamoyl-L-aspartate
creatine
β-alanine
L-saccharopine
3-phospho-L-serine
chorismate
maleate
fumarate
succinate
(S)-malate
D-glucarate
(2S,3S)-2-methylcitrate
cis-2-methylaconitate
cis-aconitate
D-threo-isocitrate
(S)-lactate
(R)-lactate
(R)-glycerate
formate
propanoate
acetate
octanoate
decanoate
(2E,6E)-farnesoate
(15Z)-tetracosenoate
oleate
linoleate
α-linolenate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
phytenate
pristanate
palmitate
D-gluconate
(R)-pantoate
a coenzyme-A group
caldariellaquinone
diacetyl
acetone
glycolaldehyde
(2E,6E)-farnesal
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
α-D-galactopyranose
β-D-galactopyranose
α-D-xylopyranose
α-L-arabinopyranose
butan-1-al
1-octanal
formaldehyde
isobutanal
1-propanal
acetaldehyde
(S)-lactaldehyde
phytenal
butan-1-ol
propan-1-ol
ethanol
phytol
(3R)-linalool
(3S)-linalool
myo-inositol
1D-myo-inositol 2-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 3-monophosphate
(3R)-hydroxy, 6-cis-tridecenoyl-CoA
(3R)-hydroxy, 6-trans-tridecenoyl-CoA
(3R)-hydroxy, 4-trans-undecenoyl-CoA
(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA
(3R)-hydroxy-5-trans-dodecenoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
(3E)-dec-3-enoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3Z,5E)-dodeca-3,5-dienoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
2-trans-nonenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
4-trans-undecenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
4-cis-undecenoyl-CoA
saturated CDP-archaeol
unsaturated CDP-archaeol
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
geranyl diphosphate
(2E,6E)-farnesyl diphosphate
3-octaprenyl-4-hydroxybenzoate
di-trans,octa-cis-undecaprenyl phosphate
geranylgeranyl diphosphate
all-trans-octaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
phlorisovalerophenone
deoxyhumulone
4-prenylphlorisovalerophenone
deoxycohumulone
1-(β-D ribofuranosyl)nicotinamide
keto-D-fructose
β-D-fructofuranose
N-acetyl-α-D-glucosamine 1-phosphate
3'-ketolactose
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
α,α-trehalose 6-phosphate
GDP-α-D-mannose
ADP ribose 1'',2''-cyclic phosphate
ADP ribose 1''-phosphate
ADP-D-ribose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
D-erythrose 4-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
D-ribulose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
L-fuculose 1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
XLLG xyloglucan oligosaccharide
XLXG xyloglucan oligosaccharide
XXLG xyloglucan oligosaccharide
XXXG xyloglucan oligosaccharide
raffinose
maltotriose
stachyose
maltotetraose
maltoheptaose
maltohexaose
maltopentaose
α-maltose
melibiose
sucrose
α,α-trehalose
α-lactose
β-D-cellobiose
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
adenylo-succinate
5'-deoxyadenosine
cyclic-AMP
reduced β-nicotinamide D-ribonucleotide
β-nicotinamide D-ribonucleotide
NADH
NADPH
NAD+
NADP+
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
2-iminobutanoate
carboxyphosphinopyruvate
3-(hydroxyphosphinoyl)pyruvate
1-carboxyvinyl carboxyphosphonate
adenosyl-cobinamide phosphate
cob(II)yrinate a,c-diamide
adenosylcobyrate
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
nitrous oxide
protoporphyrinogen IX
uroporphyrinogen-III
uroporphyrinogen-I
siroheme
oxygen
hydrogen sulfide
sn-glycerol 1-phosphate
2,3-diphospho-D-glycerate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
(2R)-2,3-dihydroxy-3-methylbutanoate
(S)-methylmalonate-semialdehyde
(R)-methylmalonate-semialdehyde
5,10-methenyltetrahydrofolate mono-L-glutamate
(S)-3-hydroxy-isobutanoate
2-octaprenylphenol
nitric oxide
superoxide
3-dimethylsulfoniopropionaldehyde
methionol
3-(methylsulfanyl)propanal
dimethyl sulfide
4-methyl-5-(2-phosphooxyethyl)thiazole
5-(2-hydroxyethyl)-4-methylthiazole
L-cysteate
3-sulfopyruvate
Fe2+
H+
ammonium
trimethyl sulfonium
hydrogencarbonate
nitrite
nitrate
selenate
thiosulfate
sulfate
phosphate
triphosphate
diphosphate
(2Z)-2-aminobut-2-enoate
agmatine
putrescine
dehydrospermidine
spermidine
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
3-oxo-4-pregnene-20-carboxyl-CoA
3,22-dioxochol-4-en-24-oyl-CoA
(indol-3-yl)acetate
(E)-glutaconyl-CoA
glutaryl-CoA
3'-dephospho-CoA
α-linolenoyl-CoA
linoleoyl-CoA
3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA
choloyl-CoA
chenodeoxycholoyl-CoA
benzoyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
4-hydroxybenzoyl-CoA
(+)-7-epi-jasmonoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
acetyl-CoA
succinyl-CoA
3-hydroxyisovaleryl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
(E)-2-methylcrotonoyl-CoA
(3S)-hydroxyadipyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
methylacrylyl-CoA
crotonyl-CoA
phytenoyl-CoA
(2E)-oct-2-enoyl-CoA
(2E)-dec-2-enoyl-CoA
(3Z)-dodec-3-enoyl-CoA
oleoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA
(S)-3-hydroxyhexadecanoyl-CoA
(Z)-15-tetracosenoyl-CoA
propanoyl-CoA
butanoyl-CoA
hexanoyl-CoA
decanoyl-CoA
lauroyl-CoA
octanoyl-CoA
palmitoyl-CoA
pristanoyl-CoA
3-oxoadipyl-CoA
acetoacetyl-CoA
3-oxooctanoyl-CoA
3-oxododecanoyl-CoA
3-oxodecanoyl-CoA
3-oxohexanoyl-CoA
3-oxo-palmitoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxo-myristoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
D-glucono-1,5-lactone
(S)-NADHX
(R)-NADHX