an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4-amino-4-deoxychorismate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

4-acetamidobutanoate

4-acetamidobutanal

3-mercaptopyruvate

orotidine 5'-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

acetyl phosphate

ethanolamine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(R)-pantothenate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prephytoene diphosphate

carbonic acid

2-(α-hydroxyethyl)thiamine diphosphate

5-phospho-β-D-ribosylamine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

β-D-ribosylnicotinate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2-oleoylglycerol

O-acetyl-L-serine

hydrogen selenide

(S)-dihydroorotate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

3-dehydroquinate

5-enolpyruvoyl-shikimate 3-phosphate

1-phosphatidyl-myo-inositol 2-mannose

1-phosphatidyl-myo-inositol

hydroxylamine

ammonia

autoinducer 2

S-ribosyl-L-homocysteine

2-dehydropantoate

γ-L-glutamyl 5-phosphate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

L-selenocystathionine

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

N-ethylsuccinimide

N-ethylmaleimide

4-(2-amino-3-hydroxyphenyl)-2,4-dioxobutanoate

4-(2-aminophenyl)-2,4-dioxobutanoate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

trans-O-hydroxybenzylidenepyruvate

α-D-glucosamine 1-phosphate

itaconate

(indol-3-yl)pyruvate

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

4-methyl-3-oxoadipate

lipoamide

dihydrolipoamide

S-formylmycothiol

S-(hydroxymethyl)mycothiol

iminodiacetate

nitrilotriacetate

quinolinate

2-phenylethanol

3-methylbutanal

3-methylbutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

isobutanol

2-methylbutanal

2-methylbutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-oxopent-4-enoate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(S)-4-hydroxy-2-oxopentanoate

chloroacetaldehyde

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(2,3-dihydroxyphenyl)propanoate

3-hydroxybenzaldehyde

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

1,4-dihydroxy-2-naphthoate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

lipid X

glutathione disulfide

4-amino-2-methyl-5-pyrimidinemethanol

mercuriphenyl acetate

xanthine

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

hydroxypyruvate

N⁵-carboxyaminoimidazole ribonucleotide

dehydroprephenate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

L-3-cyclohex-2'-enylalanine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-oxoglutaramate

O-1,4-α-L-dihydrostreptosyl-streptidine 6-phosphate

dihydrostreptomycin 6-phosphate

dTDP-L-dihydrostreptose

CDP-N-methyl-L-glucosamine

streptomycin 6-phosphate

streptidine 6-phosphate

N¹-amidinostreptamine 6-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

glutathioselenol

selenodiglutathione

tartronate semialdehyde

chlorate

2-deoxystreptamine

paromamine

2'-N-acetylparomamine

UDP-α-D-kanosamine

2'-deamino-2'-hydroxyneamine

6'-dehydroparomamine

2'-deamino-2'-hydroxy-6'-dehydroparomamine

2'-deamino-2'-hydroxyparomamine

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

1-(methylsulfanyl)xylulose 5-phosphate

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

pyruvic oxime

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

xanthurenate

1-piperideine 6-carboxylate

kynurenate

maltol

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

cyclic-2,3-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dehydroascorbate (bicyclic form)

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

CO₂

(R)-mandelate

(S)-mandelate

vanillin

(S)-2-amino-6-oxohexanoate

oxalosuccinate

2-methyl-trans-aconitate

citrate

oxaloacetate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

homogentisate

3-dehydroshikimate

shikimate

2-maleylacetate

3-oxopropanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

succinate semialdehyde

4-aminobutanoate

urea

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

shikimate 3-phosphate

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

prenyl diphosphate

isopentenyl diphosphate

coproporphyrinogen III

anthranilate

N-(5-phosphoribosyl)-anthranilate

pyrazine-2-carboxylate

salicyl alcohol

methylsalicylate

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

propionamide

acrylate

acrylamide

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

hydrogen peroxide

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

lipid IV_A

lipid A disaccharide (E. coli)

L-canavanine

canavaninosuccinate

L-arginino-succinate

O-ureido-L-homoserine

carbamoyl phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

DNA without lesion

glycolate

2-phosphoglycolate

4'-phosphopantetheine

thiamine diphosphate

glycerone phosphate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

5-oxo-L-proline

3-ureidopropanoate

4-pyridoxolactone

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

cis,cis-muconate

(+)-muconolactone

muconolactone

isochorismate

acetoacetate

4-fumaryl-acetoacetate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-phosphooxypyruvate

(R)-2,3-dihydroxy-3-methylpentanoate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

4-hydroxy-2-nonenal

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(L-threonylcarbamoyl)adenylate

4-imidazolone-5-propanoate

urocanate

formamide

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

selenophosphate

H₂

chlorite

(lipoyl)adenylate

phosphoenolpyruvate

mycothione

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol 4-phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinol

histidinal

3-deoxy-D-arabino-heptulosonate 7-phosphate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

prephenate

urea-1-carboxylate

riboflavin

thiamine

L-ascorbate

nicotinate

nicotinamide

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

all-trans-retinol

pyridoxal 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine 5'-phosphate

pyridoxamine

FMN

FMNH₂

FADH₂

FAD

NADPH

NADH

NAD⁺

NADP⁺

3-demethylubiquinol-8

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-8

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

(S)-NADHX

(R)-NADHX

glycine betaine

coenzyme A

(R)-lipoate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

preQ₀

acrylonitrile

hydrogen cyanide

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

nitric oxide

superoxide

hydroxyl radical

monodehydroascorbate radical

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

Hg⁰

hydrogen sulfide

oxygen

protoporphyrin IX

uroporphyrinogen-III

Mg-protoporphyrin

coproporphyrinogen I

uroporphyrinogen-I

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrinogen IX

hemin

protoheme

(Z,Z)-biliverdin-IX α

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

N₂

cobalt-precorrin-2

cobalt-sirohydrochlorin

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cob(II)yrinate a,c-diamide

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

cobalt-factor III

cob(II)yrinate c-monoamide

phosphonoacetaldehyde

ethylphosphate

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

4-methylphenol

L-homocysteine

L-kynurenine

L-α-amino-ε-keto-pimelate

L-cysteine

glycine

L-glutamine

L-threonine

L-tyrosine

L-asparagine

L-serine

L-arginine

L-lysine

L-histidine

L-glutamate

L-aspartate

L-proline

L-alanine

L-leucine

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-threo-3-phenylserine

L-citrulline

L-isoleucine

L-valine

L-methionine

L-tryptophan

L-phenylalanine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

L-4-hydroxyglutamate semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homoserine

L-ornithine

O-phospho-L-homoserine

L-canaline

L-aspartate 4-semialdehyde

meso-diaminopimelate

L-selenocysteine

L-cystathionine

L-aspartyl-4-phosphate

L-isoglutamine

L,L-diaminopimelate

formyl-L-isoglutamine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-carbamoyl-L-aspartate

seleno-L-homocysteine

L-saccharopine

3-phospho-L-serine

O-acetyl-L-homoserine

L-proline betaine

sarcosine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-hydroxy-L-kynurenine

D-aspartate

D-methionine

D-alanine

GMP

XMP

IDP

ITP

adenylo-succinate

IMP

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

dITP

dIDP

dIMP

XTP

cyclic-AMP

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

dGMP

dAMP

8-oxo-GTP

isoguanine

8-oxo-dGTP

ATP

2'-deoxyinosine

2'-deoxyadenosine

ADP

AMP

5'-deoxyadenosine

2'-deoxyguanosine

dGTP

GTP

GDP

dADP

dATP

dGDP

1-(5-phospho-β-D-ribosyl)-AMP

ppGpp

pppGpp

5,6-dihydrouracil

5,6-dihydrothymine

UDP-α-D-glucose

GDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

ADP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-sulfoquinovopyranose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

GDP-α-D-mannose

dTDP-N-acetylviosamine

dTDP-3-dehydro-6-deoxy-α-D-glucopyranose

dTDP-3-acetamido-3,6-dideoxy-α-D-glucopyranose

dTDP-3-amino-3,6-dideoxy-α-D-glucopyranose

dTDP-6-deoxy-α-D-allose

dTDP-4-dehydro-6-deoxy-α-D-gulose

dTDP-viosamine

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-β-L-4-epi-vancosamine

dTDP-2,3,6-trideoxy-3-C-methyl-3-amino-4-dehydro-α-D-gulose

dTDP-2,3,6-trideoxy-3-C-methyl-3-amino-4-dehydro-α-D-glucose

dTDP-3,4-didehydro-2,6-dideoxy-α-D-glucose

dTDP-2,6-dideoxy-D-glycero-hex-2-enos-4-ulose

dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-α-L-glucose

dTDP-L-megosamine

dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-α-D-glucose

dTDP-3-amino-4-dehydro-2,3,6-trideoxy-α-D-glucose

dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

guanosine

xanthosine

inosine

adenosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

preQ₁

guanine

adenine

thymine

uracil

2-hydroxy-dATP

5-hydroxy-CTP

dCDP

dUDP

dTDP

dCTP

dTTP

dUTP

dCMP

dUMP

dTMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UMP

CMP

CDP

UDP

UTP

CTP

precorrin-2

precorrin-1

sirohydrochlorin

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

salinosporamide A

orotate

(S)-1-pyrroline-5-carboxylate

hydantoin

2-hydroxychromene-2-carboxylate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

4-tyrosol

benzene

actinorhodin

actinorhodin intermediate

urate

salicylaldehyde

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

phenol

trans-cinnamate

protocatechuate

salicylate

benzoate

3-hydroxybenzoate

4-aminobenzoate

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

3-methoxy-4-hydroxyphenylglycol

3-chlorocatechol

3,4-dihydroxyphenylacetate

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

enterobactin

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-cis-undecenoyl-CoA

(3E)-dec-3-enoyl-CoA

4-trans-undecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

1,2-dibutyrin

tributyrin

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

3-octaprenyl-4-hydroxybenzoate

apo-4'-lycopenal

apo-4'-lycopenoate

all-trans-phytoene

15-cis-phytoene

all-trans phytofluene

all-trans-retinyl palmitate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-oleoyl-sn-glycerol 3-phosphate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

(S)-DNPA

5-deoxy-dihydrokalafungin

vanillylamine

dihydrokalafungin

streptomycin

neamine

kanamycin X

kanamycin C

kanamycin D

3''-deamino-3''-hydroxykanamycin B

kanamycin A

2'-dehydrokanamycin A

kanamycin B

ferrichrome

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

dihomo γ-linolenoyl-CoA

isobutanoyl-CoA

itaconyl-CoA

(2S)-methylsuccinyl-CoA

phenylacetyl-CoA

4-chloro-3-hydroxybutyryl-CoA

4-chloro-crotonyl-CoA

chloroethylmalonyl-CoA

2-methylbutanoyl-CoA

acetyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

succinyl-CoA

3'-dephospho-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

hexanoyl-CoA

lauroyl-CoA

decanoyl-CoA

octanoyl-CoA

cerotoyl-CoA

pristanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

butanoyl-CoA

propanoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxododecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctadecanoyl-CoA

(S)-malyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

trans-dienelactone

cis-dienelactone

(+)-5-chloromuconolactone

5-chloro-5-deoxy-D-ribono-γ-lactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

D-gluconate

aldehydo-L-galactonate

L-gulonate

D-mannonate

1-(β-D ribofuranosyl)nicotinamide

2-deoxy-L-scyllo-inosose

3-amino-2,3-dideoxy-scyllo-inosose

2-deoxy-scyllo-inosamine

aldehydo-D-galacturonate

maltotriose

maltotetraose

sucrose

α,α-trehalose

maltopentaose

maltohexaose

maltoheptaose

glycolaldehyde

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

α-D-galactopyranose

5-chloro-5-deoxy-D-ribose

D-xylulose

keto-L-sorbose

keto-D-fructose

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-mannosamine

glycerol

D-sorbitol

L-iditol

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

a coenzyme-A group

methylglyoxal

diacetyl

(S)-lactaldehyde

1-octanal

formaldehyde

isobutanal

1-propanal

butan-1-al

acetaldehyde

phytenal

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

(3E,5Z)-tetradecadienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

stearate

palmitate

pristanate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

decanoate

octanoate

butanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxoglutarate

pyruvate

2-oxobutanoate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

acetate

propanoate

formate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

3-(carbamoylamino)-2-methylpropanoate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

(4S)-4-hydroxy-2-oxoglutarate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

(R)-pantoate

5-deoxy-D-glucuronate

5-chloro-5-deoxy-D-ribonate

aldehydo-D-glucuronate

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

pyrazinamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

acetamide

2-chloro-cis,cis-muconate

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

cholest-dien-3-one

cholest-4-en-3-one

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3,5-cyclohexadiene-1,2-diol-1-carboxylate

scyllo-inositol

1D-chiro-inositol

myo-inositol

1-amino-1-deoxy-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol

D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol

D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol 4-phosphate

1-guanidino-1-deoxy-scyllo-inositol 4-phosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

phytol

propan-1-ol

butan-1-ol

ethanol

methanol

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

betaine aldehyde

choline

agmatine

putrescine

spermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

S-(hydroxymethyl)glutathione

methanethiol

thiocyanate

glutathione

mycothiol

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

Fe³⁺

Co²⁺

Mg²⁺

Hg²⁺

Ni²⁺

Zn²⁺

Mn²⁺

Fe²⁺

ammonium

H⁺

trimethyl sulfonium

selenate

selenite

perchlorate

OH^-

hydrogensulfite

hydrogencarbonate

nitrite

sulfite

thiosulfate

molybdate

nitrate

selenide

sulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

2-iminosuccinate

2-iminobutanoate