an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂

muconolactone

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

acetoacetate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

ammonia

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

selenodiglutathione

glutathioselenol

3'-phosphoadenylyl-sulfate

3-ureidopropanoate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

4-amino-2-methyl-5-pyrimidinemethanol

prephytoene diphosphate

S-ribosyl-L-homocysteine

autoinducer 2

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

4-acetamidobutanal

4-acetamidobutanoate

dimethylsulfoniopropanoate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

β-D-ribosylnicotinate

creatinine

1,4-dihydroxy-2-naphthoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

methylamine

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

urea-1-carboxylate

2-methyl-trans-aconitate

(S)-2,3,4,5-tetrahydrodipicolinate

4-hydroxy-2-nonenal

morphinone

DNA without lesion

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-iminoacetate

carbon monoxide

2-keto-D-gluconate

2,5-didehydro-D-gluconate

4-methyl-3-oxoadipate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-chloro-4-methyl-cis,cis-muconate

4-methylmuconolactone

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

cis,cis-muconate

hydroxypyruvate

tartronate semialdehyde

N-(2,3-dihydroxybenzoyl)-L-serine dimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine trimer

hydrogen selenide

O-acetyl-L-serine

2-(α-hydroxyethyl)thiamine diphosphate

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

N,N-dimethylaniline

N,N-dimethylaniline-N-oxide

nicotine-1'-N-oxide

ethanolamine

3-hydroxypropanoate

3-fumarylpyruvate

3-maleylpyruvate

N-methylhydantoin

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

preuroporphyrinogen

porphobilinogen

coproporphyrinogen III

hydrogen peroxide

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

3-oxopropanoate

4-aminobutanoate

oxalosuccinate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

urea

α-D-glucosamine 1-phosphate

(R)-pantothenate

citrate

quinolinate

2-dehydropantoate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

succinate semialdehyde

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

thiamine diphosphate

4'-phosphopantetheine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

D-gluconate 6-phosphate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

6-phospho D-glucono-1,5-lactone

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

(S)-dihydroorotate

carbamoyl phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate

3-dehydroshikimate

glutathione disulfide

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

thiamine phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

4-methyl-2-oxopentanoate

dihydrolipoamide

S-acetyldihydrolipoamide

isopentenyl diphosphate

prenyl diphosphate

β-nicotinate D-ribonucleotide

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

4-amino-4-deoxychorismate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

7,8-diaminopelargonate

dethiobiotin

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

acetyl phosphate

glycerone phosphate

orotidine 5'-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

oxaloacetate

prephenate

enol-phenylpyruvate

CO₂

phosphoenolpyruvate

anthranilate

N-(5-phosphoribosyl)-anthranilate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

H₂O

monodehydroascorbate radical

hydroxyl radical

superoxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

dimethyl sulfide

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

3-sulfino-L-alanine

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

methanesulfonate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

(R)-S-lactoylglutathione

OH^-

hydrogensulfite

selenite

sulfate

sulfite

thiosulfate

nitrite

hydrogencarbonate

selenate

phosphate

diphosphate

chloride

Fe³⁺

ammonium

H⁺

Mg²⁺

Fe²⁺

trimethyl sulfonium

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

protoheme

hydrogen cyanide

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2,3-diphospho-D-glycerate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

putrescine

spermidine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

3,5-dichloro-2-methyl-muconolactone

3,5-dichloro-2-methyl-muconate

2-chloro-5-methyl-dienelactone

3-chloro-cis,cis-muconate

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

4,6-dichloro-3-methylcatechol

acetamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methylacrylyl-CoA

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxypropanoyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

isobutanoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

succinyl-CoA

crotonyl-CoA

phytenoyl-CoA

oleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

cis-dienelactone

5-chloro-3-methyl-cis-dienelactone

FADH₂

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

coenzyme A

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

L-ascorbate

thiamine

riboflavin

nicotinate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

(S)-1-pyrroline-5-carboxylate

precorrin-7

precorrin-8x

precorrin-6B

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyadenosine

2'-deoxyguanosine

xanthosine

inosine

guanosine

adenosine

hypoxanthine

dAMP

dGMP

dIMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

XMP

IMP

AMP

XTP

ITP

GTP

ATP

5,6-dihydrothymine

5,6-dihydrouracil

dCMP

uracil

dUMP

dTMP

dTDP

dTTP

dUDP

UDP

dCDP

CDP

orotate

CTP

UTP

dCTP

dUTP

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galacturonate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

uridine

cytidine

thymine

UMP

CMP

isoguanine

acrylonitrile

salicylaldehyde

4-tyrosol

4-hydroxybenzoate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-methylphenol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

catechol

enterobactin

salicylate

benzoate

4-aminobenzoate

3-methyl-cis,cis-muconate

chorismate

succinate

fumarate

L-aspartate

(S)-malate

D-glucarate

cis-aconitate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

gentisate

(R)-lactate

(S)-lactate

propanoate

formate

acetate

pyruvate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

stearate

palmitate

pristanate

D-gluconate

(R)-pantoate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

L-serine

creatine

N-carbamoylsarcosine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

glycine

L-alanine

L-leucine

L-glutamine

D-glutamate

L-glutamate

L-arginine

L-histidine

L-lysine

L-cysteine

L-asparagine

L-tyrosine

L-threonine

L-tryptophan

D-aspartate

D-alanine

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-selenomethionine

sarcosine

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

3-phospho-L-serine

L-citrulline

L-isoleucine

L-valine

S-sulfo-L-cysteine

L-homocysteine

L-aspartate 4-semialdehyde

L-homoserine

L-ornithine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L,L-diaminopimelate

L-cystathionine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

2-iminosuccinate

2-iminobutanoate

methylglyoxal

diacetyl

(2E,6E)-farnesal

glycolaldehyde

3-(N-morpholino)propanal

1-octanal

butan-1-al

formaldehyde

1-propanal

isobutanal

acetaldehyde

(S)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

butan-1-ol

methanol

ethanol

propan-1-ol

phytol

glycerol

D-mannitol 1-phosphate

(3R)-linalool

(3S)-linalool

3,5-cyclohexadiene-1,2-diol-1-carboxylate

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

all-trans-phytoene

15-cis-phytoene

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

phlorisovalerophenone

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

morphine

(S)-nicotine

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

α,α-trehalose

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose

D-xylulose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^G-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

8-oxo-GTP

8-oxo-dGTP

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

adenylo-succinate

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA