an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N-(2,3-dihydroxybenzoyl)-L-serine trimer

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

3-methyl-2-butenal

formamide

lanthionine

O-phosphoethanolamine

phosphocholine

(S)-2-amino-6-oxohexanoate

(L-threonylcarbamoyl)adenylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

creatinine

octadecanal

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

1,4-dihydroxy-2-naphthoate

glutathionylspermidine

ethanolamine

DNA without lesion

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

nigerose

acetyl phosphate

(2-hydroxyphenyl)acetate

homogentisate

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

2-aminomalonate semialdehyde

chloramphenicol

carbonic acid

pseudouridine 5'-phosphate

2-C-methyl-D-erythritol 4-phosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

1,4-dihydroxy-2-naphthoyl-CoA

N-acetyl-L,L-2,6-diaminopimelate

5-oxo-L-proline

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-mercaptopyruvate

7,8-diaminopelargonate

S-formylglutathione

methylsalicylate

salicyl alcohol

5-methylcytosine

crepenynate

prephenate

anthranilate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

L-canavanine

quinolinate

hydrogenobyrinate

2-maleylacetate

hydroxypyruvate

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

preuroporphyrinogen

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

xanthine

6-deoxyerythronolide B

dihydromonacolin L lactone

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

all-trans-13,14-dihydroretinol

(R)-2,3-dihydroxy-3-methylpentanoate

2-dehydropantoate

(S)-ureidoglycolate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-erythro-imidazole-glycerol-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

6-phospho D-glucono-1,5-lactone

(S)-2,3,4,5-tetrahydrodipicolinate

H₂

N-acetylglutamyl-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

arsenite

α-D-galactosyl-diphosphoundecaprenol

2-isopropylmaleate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

α-ribazole

α-ribazole 5'-phosphate

hop-22(29)-ene

squalene

presqualene diphosphate

3-dehydroquinate

N-acetyl-L-glutamate 5-semialdehyde

succinate semialdehyde

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-phosphooxypyruvate

2-cis,4-trans-xanthoxin

oxalosuccinate

thiamine phosphate

thiamine diphosphate

15,16-dihydrobiliverdin

4-amino-4-deoxychorismate

S-Inosyl-L-homocysteine

L-arogenate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

a [myosin light-chain] L-serine

myosin light-chain phosphate

dethiobiotin

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

2-oxoglutaramate

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

N-(5-phosphoribosyl)-anthranilate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

shikimate

3-dehydroshikimate

γ-L-glutamyl 5-phosphate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

isochorismate

carbon monoxide

pimeloyl-CoA

8-amino-7-oxononanoate

4'-phosphopantetheine

dihydrolipoamide

S-acetyldihydrolipoamide

oxaloacetate

hydrogen peroxide

histidinal

histidinol

porphobilinogen

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

hydrogen selenide

O-acetyl-L-serine

tartronate semialdehyde

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

carbamoyl phosphate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

citrate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-amino-6-(D-ribitylamino)uracil

orotidine 5'-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

D-gluconate 6-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

glutathione disulfide

4-hydroxy-2-nonenal

α-D-glucosamine 1-phosphate

phosphoenolpyruvate

dihydroxyacetone

glycerone phosphate

isopentenyl diphosphate

urea

(S)-dihydroorotate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

lipid X

lipid A disaccharide (E. coli)

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

hydrogenobyrinate a,c-diamide

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

coproporphyrinogen III

CO₂

prephytoene diphosphate

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

ammonia

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

dihydromonacolin L acid

4-oxoglutaramate

1-piperideine 6-carboxylate

(R)-pantothenate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

1,5-anhydro-D-fructose

3'-phosphoadenylyl-sulfate

mercuriphenyl acetate

L-dehydro-ascorbate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

selenodiglutathione

glutathioselenol

α-D-galacturonate 1-phosphate

N⁵-carboxyaminoimidazole ribonucleotide

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

pseudouridine

2-amino-3-carboxymuconate-6-semialdehyde

lipid IV_A

dialurate

acetoacetate

5-amino-6-(5-phospho-D-ribitylamino)uracil

(2S)-lactyl-2-diphospho-5'-guanosine

4-amino-2-methyl-5-pyrimidinemethanol

4-imidazolone-5-propanoate

urocanate

5,6-dimethylbenzimidazole

2-iminobutanoate

2-iminosuccinate

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

cobalt-precorrin-5B

cobalt-precorrin-6A

3,8-divinyl chlorophyllide a

protochlorophyllide a

cob(II)yrinate c-monoamide

cobyrinate

Mg-protoporphyrin

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobyrate

chlorophyllide a

chlorophyll a

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

cob(II)yrinate a,c-diamide

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

protoheme

hydrogen cyanide

N₂

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

protoporphyrinogen IX

red chlorophyll catabolite

(Z,Z)-biliverdin-IX α

(2R,3Z)-phycocyanobilin

(3Z)-phycoerythrobilin

pheophorbide a

Hg⁰

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

L-homocysteine

4-methylphenol

(15S)-HPETE

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

dimethyl sulfide

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

L-cysteate

3-sulfopyruvate

taurine

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

Fe³⁺

K⁺

ammonium

H⁺

Ni²⁺

Mg²⁺

Ca²⁺

Hg²⁺

Fe²⁺

Cu²⁺

Co²⁺

trimethyl sulfonium

selenite

selenate

hydrogencarbonate

nitrite

sulfite

nitrate

thiosulfate

OH^-

hydrogensulfite

sulfate

molybdate

phosphonate

phosphate

triphosphate

diphosphate

chloride

(2Z)-2-aminobut-2-enoate

agmatine

N¹-acetylspermidine

N¹-acetylspermine

N-acetylputrescine

spermine

putrescine

spermidine

choline

betaine aldehyde

betaine aldehyde hydrate

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

allantoate

acetamide

isopenicillin N

penicillin N

(7R)-7 aminocephalosporanate

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

nicotinamide

ethene

heptadecane

β-sitosterol 3-O-β-D-glucoside

cholesteryl-β-D-glucoside

stigmasterol 3-O-β-D-glucoside

brassicasterol 3-O-β-D-glucoside

solasodine 3-O-β-D-glucoside

cholesterol

solasodine

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-cis-abscisate

8'-hydroxyabscisate

phaseic acid

4-hydroxybenzoyl-CoA

γ-linolenoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

trans-caffeoyl-CoA

trans-feruloyl-CoA

succinyl-CoA

3'-dephospho-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

phytenoyl-CoA

phytanoyl-CoA

oleoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

acetoacetyl-CoA

all-trans-retinyl palmitate

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

erythronolide B

3-α-mycarosylerythronolide B

erythromycin D

D-glucono-1,5-lactone

FAD

FMN

FMNH₂

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinol

phylloquinol

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

caldariellaquinone

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

thiamine

riboflavin

L-ascorbate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxine

δ-tocotrienol

β-tocotrienol

γ-tocotrienol

α-tocotrienol

δ-tocopherol

β-tocopherol

γ-tocopherol

α-tocopherol

menadione

all-trans-retinol

all-trans-retinal

(S)-1-pyrroline-5-carboxylate

precorrin-7

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-1

precorrin-5

precorrin-3B

precorrin-4

precorrin-2

precorrin-3A

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

inosine

adenosine

xanthosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

dCMP

dUDP

dCDP

cytosine

CDP

dTMP

dTDP

dTTP

CTP

UTP

dCTP

dUTP

orotate

uracil

UDP

CDP-choline

dUMP

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galacturonate

UDP-β-L-iduronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-sulfoquinovopyranose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-D-desosamine

dTDP-β-L-mycarose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

2'-deoxyuridine

thymidine

2'-deoxycytidine

thymine

CMP

UMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

(indole-3-yl)acetonitrile

preQ₀

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

urate

4-hydroxybenzoate

salicylaldehyde

benzene

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

demethylphylloquinol

2-methyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-phytyl-1,4-benzoquinol

2-methyl-6-phytyl-1,4-benzoquinol

menadiol

salicylate

4-aminobenzoate

benzoate

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

L-aspartate

(S)-malate

(2R)-homocitrate

cis-aconitate

cis-homoaconitate

D-threo-isocitrate

(R)-lactate

(S)-lactate

propanoate

formate

pyruvate

acetate

butanoate

decanoate

octanoate

(15Z)-tetracosenoate

oleate

γ-linolenate

linoleate

arachidonate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

apo-4'-lycopenoate

phytenate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

pristanate

palmitate

D-gluconate

(R)-pantoate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

L-serine

creatine

β-alanine

L-glutamine

glycine

L-alanine

L-leucine

L-proline

D-glutamate

L-glutamate

L-arginine

L-histidine

L-lysine

L-asparagine

L-threonine

L-tyrosine

L-cysteine

L-tryptophan

L-phenylalanine

D-phenylalanine

D-aspartate

D-ornithine

D-alanine

L-saccharopine

L-aspartyl-4-phosphate

2-hydroxy-5-oxoproline

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-citrulline

L-valine

L-isoleucine

L-canaline

1-aminocyclopropane-1-carboxylate

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-ornithine

hypoglycin A

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

L-selenocysteine

L-methionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-isoglutamine

methylglyoxal

diacetyl

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

glycolaldehyde

1-octanal

acetaldehyde

formaldehyde

butan-1-al

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

ethanol

methanol

butan-1-ol

glycerol

D-sorbitol

L-iditol

myo-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

torulene

apo-4'-lycopenal

antheraxanthin

violaxanthin

zeaxanthin

9-cis-violaxanthin

(3S,5R,6R)-3,5-dihydroxy-6,7-didehydro-5,6-dihydro-12'-apo-β-caroten-12'-al

9'-cis-neoxanthin

all-trans-3,4-didehydrolycopene

all-trans neurosporene

all-trans-lycopene

all-trans-ζ-carotene

prolycopene

9,9'-di-cis-ζ-carotene

15-cis-phytoene

all-trans phytofluene

9,15,9'-tri-cis-ζ-carotene

4'-apo-β-carotenal

(3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-β-caroten-12'-al

geranyl diphosphate

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

sitosterol

stigmasterol

brassicasterol

phytyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

betanidin

betanidin quinone

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

iron(III) dicitrate

ferric-enterobactin complex

selaginose

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

α,α-trehalose

1,5-anhydro-D-mannitol

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

keto-L-sorbose

keto-D-fructose

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 1,7-bisphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

aldehydo-L-galactonate

pppGpp

ppGpp

cyclic-AMP

adenylo-succinate

cyclic-GMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

5-fluorocytosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-hydroxy-dATP

5-hydroxy-CTP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B