an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

selenodiglutathione

glutathioselenol

hydrogen selenide

2,5-dioxopentanoate

dialurate

N²-succinyl-L-arginine

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-amino-3-carboxymuconate-6-semialdehyde

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

pyrazine-2-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

7-carboxy-7-deazaguanine

2-methyl-1,4-benzoquinone

N²-succinyl-L-glutamate 5-semialdehyde

2-succinylbenzoate

acetoacetate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

N-ethylsuccinimide

N-ethylmaleimide

N²-succinylglutamate

N²-succinyl-L-ornithine

methyl-1,4-benzoquinol

crotonate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

5-enolpyruvoyl-shikimate 3-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

4-amino-2-methyl-5-pyrimidinemethanol

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

3-mercaptopyruvate

3-deoxy-D-glycero-2,5-hexodiulosonate

5-oxo-L-proline

2-amino-2-deoxy-D-gluconate 6-phosphate

2-deoxy-D-glucose

2-deoxy-D-glucose 6-phosphate

3-deoxy-α-D-manno-2-octulosonate

tartronate semialdehyde

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

carboxyphosphate

citraconate

(2R,3S)-3-methylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

3-phosphooxypyruvate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinol

5,6-dimethylbenzimidazole

4-amino-4-deoxychorismate

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

1,6-anhydro-N-acetyl-β-muramate

glutathione disulfide

5'-phosphoguanylyl(3'→5')guanosine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

hydroxypyruvate

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

α-D-glucosamine 1-phosphate

urea

urea-1-carboxylate

N-acetyl-D-muramate 6-phosphate

3-hydroxypropanoate

diethylthiophosphate

diethylphosphate

dimethylthiophosphate

creatinine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

nicotinate adenine dinucleotide

(R)-1-amino-2-propanol O-2-phosphate

α-ribazole 5'-phosphate

α-ribazole

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

(L-seryl)adenylate

(2,3-dihydroxybenzoyl)adenylate

N-(2,3-dihydroxybenzoyl)-L-serine dimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine trimer

H₂

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

oxaloacetate

5-methylcytosine

N⁶-(D-psicosyl)-L-lysine

2-phosphoglycolate

2-dehydro-3-deoxy-D-gluconate

2-protocatechuoylphloroglucinolcarboxylate

ethanolamine

3-oxopropanoate

succinate semialdehyde

(R)-4'-phosphopantothenoyl-L-cysteine

lipid IV_A

ADP-L-glycero-β-D-manno-heptose

aminoacetone

O-acetyl-L-serine

1,4-dihydroxy-2-naphthoate

dihydroxyacetone

N-acetylglutamyl-phosphate

L-arginino-succinate

canavaninosuccinate

L-canavanine

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

2-dehydropantoate

(S)-2,3,4,5-tetrahydrodipicolinate

2-C-methyl-D-erythritol 4-phosphate

lipid A disaccharide (E. coli)

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

4'-phosphopantetheine

shikimate 3-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

5-aminolevulinate

4-hydroxy-2-nonenal

glycolate

prenyl diphosphate

(S)-4-amino-5-oxopentanoate

coenzyme F₃₉₀-A

N-(5-phosphoribosyl)-anthranilate

anthranilate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

orotidine 5'-phosphate

N,N-dimethyl-1,4-phenylenediamine

(S)-2-amino-6-oxohexanoate

O-ureido-L-homoserine

carbamoyl phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-dihydroorotate

3-dehydroquinate

carbonic acid

3-hydroxy-5-phosphooxypentane-2,4-dione

3,4,4-trihydroxy-5-phosphooxypentan-2-one

(S)-mandelate

(R)-mandelate

S-ribosyl-L-homocysteine

autoinducer 2

prephenate

S-formylglutathione

5-dehydro-4-deoxy-D-glucarate

histidinal

5-dehydro-D-gluconate

salicyl alcohol

methylsalicylate

4-aminobutanoate

2-maleylacetate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

(enterobacterial common antigen)-undecaprenyl diphosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

ADP-D-glycero-β-D-manno-heptose

1-deoxy-L-glycero-tetrulose 4-phosphate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

acetyl phosphate

propanoyl phosphate

(lipoyl)adenylate

(indol-3-yl)pyruvate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

DNA without lesion

7,8-diaminopelargonate

pimeloyl-CoA

8-amino-7-oxononanoate

dethiobiotin

urocanate

4-imidazolone-5-propanoate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

glycerone phosphate

quinolinate

xanthine

γ-L-glutamyl 5-phosphate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

coproporphyrinogen III

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

2-iminoacetate

shikimate

3-dehydroshikimate

formate

5-guanidino-2-oxopentanoate

lipid X

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

oxalosuccinate

(R)-pantothenate

(R)-4'-phosphopantothenate

hydrogen peroxide

selenophosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

L-selenocystathionine

N-acetyl-L-glutamate 5-semialdehyde

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

citrate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

CO₂

isopentenyl diphosphate

porphobilinogen

preuroporphyrinogen

1-pyrroline

formamide

H₂O

choline

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

1-piperideine 6-carboxylate

4-oxoglutaramate

2-keto-L-gulonate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

aniline

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

4-aminobutanal

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

spermine

spermidine

cadaverine

putrescine

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfino-L-alanine

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

3-sulfopyruvate

L-cysteate

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

isovaleryl-CoA

3-methylcrotonyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

malonyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

acetyl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

cis-vaccenoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

ethene

glycocholate

cholate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

riboflavin

nicotinamide

nicotinate

all-trans-retinol

all-trans-retinal

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxal

menadione

cob(I)alamin

adenosylcobalamin

FAD

FADH₂

FMNH₂

FMN

caldariellaquinone

caldariellaquinol

ubiquinol-8

ubiquinol-10

ubiquinol-9

ubiquinol-7

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-8

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

glycine betaine

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

D-xylulose

L-ribulose

D-ribulose

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

α-L-arabinopyranose

keto-D-fructose

β-D-fructofuranose

α-D-glucopyranose

β-D-glucopyranose

keto-L-rhamnulose

β-L-fucopyranose

α-L-fucopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-allofuranose

β-D-allopyranose

D-glyceraldehyde

4-deoxy-L-threo-hex-4-enopyranuronate

glycerol

D-ribitol

D-sorbitol 6-phosphate

D-mannitol 1-phosphate

galactitol 1-phosphate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

UDP-α-D-galactose

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

arbutin-6-phosphate

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-α-D-mannose

GDP-α-D-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

ADP-α-D-glucose

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP-3-deoxy-β-D-manno-octulosonate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

N⁶-(6-phospho-D-fructosyl)-L-lysine

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

α-D-galactose 6-phosphate

D-fructose 6-phosphate

keto-L-tagatose 6-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 1-phosphate

aldehydo-D-arabinose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

keto-L-sorbose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-D-galacturonate

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α,α-trehalose

D-galactonate

D-altronate

D-mannonate

D-gluconate

L-idonate

dIDP

dITP

IDP

adenylo-succinate

dGMP

dAMP

ITP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dATP

dGTP

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2'-deoxyguanosine

cyclic-AMP

pppGpp

ppGpp

2'-deoxyadenosine

2'-deoxyinosine

5'-deoxyadenosine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

IMP

hypoxanthine

dADP

dGDP

ADP

ATP

XMP

GMP

AMP

GTP

GDP

isoguanine

8-oxo-dGTP

8-oxo-GTP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

inosine

xanthosine

adenosine

guanosine

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

cyclic di-3',5'-guanylate

5-hydroxy-CTP

5-hydroxy-CMP

2-hydroxy-dATP

dUTP

dCTP

dTTP

UTP

CTP

dCMP

dTMP

dUMP

UMP

CMP

dTDP

dUDP

dCDP

UDP

CDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cytidine-3'-monophosphate

uridine 3'-monophosphate

cytosine

thymine

uracil

adenine

guanine

preQ₁

5-fluorocytosine

5'-deoxy-5'-fluoroadenosine

5-fluorouracil

(R)-lipoate

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

oxidized coenzyme F₄₂₀-2

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

7,8-dihydropterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin triphosphate

cyclic pyranopterin phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

5,6,7,8-tetrahydromonapterin

orotate

precorrin-1

precorrin-2

sirohydrochlorin

(S)-1-pyrroline-5-carboxylate

quercetin

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

hydroquinone

2,3-dihydroxybenzoate

enterobactin

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-nonaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-heptaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-nonaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-heptaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

parathion

amino-parathion

methyl parathion

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-aminophenol

4-nitrophenol

4-methylphenol

methylglyoxal

diacetyl

formaldehyde

acetaldehyde

(S)-lactaldehyde

myo-inositol

D-myo-inositol (1,4,5)-trisphosphate

D-myo-inositol (1,3,4)-trisphosphate

D-myo-inositol (1,3,4,5)-tetrakisphosphate

D-myo-inositol (1,4)-bisphosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

ethanol

methanol

ferric-enterobactin complex

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

geranyl diphosphate

trans,octacis-decaprenyl phosphate

β-carotene 15,15' epoxide

15,15'-dihydroxy-β-carotene

β-carotene

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-18:1-2-18:1-phosphatidylethanolamine

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-palmitoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

pyrazinamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

7-hydroxylaurate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-lactate

palmitate

stearate

butanoate

decanoate

octanoate

laurate

(15Z)-tetracosenoate

oleate

α-linolenate

linoleate

phytenate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

acetate

D-tagaturonate

carbamate

L-α-amino-ε-keto-pimelate

L-citrulline

L-cystine

O-phospho-L-homoserine

N⁶-(D-fructosyl)-L-lysine

L-aspartate 4-semialdehyde

L-canaline

L-glutamate-5-semialdehyde

L-homoserine

O-succinyl-L-homoserine

L-homocysteine

L-ornithine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-lysine

meso-diaminopimelate

L-selenocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-isoleucine

L-leucine

L-valine

L-proline

L-threonine

L-tyrosine

L-tryptophan

L-phenylalanine

L-histidine

glycine

L-alanine

L-asparagine

L-arginine

L-serine

L-aspartate

L-glutamine

L-glutamate

L-methionine

L-cysteine

D-serine

creatine

β-alanine

D-glutamate

D-cysteine

D-arginine

D-alanine

L,L-diaminopimelate

L-cystathionine

L-aspartyl-4-phosphate

L-isoglutamine

N-carbamoyl-L-aspartate

N-methyl-L-tryptophan

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

L-2-amino-3-oxobutanoate

L-saccharopine

iminoarginine

seleno-L-homocysteine

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

N-α-acetyl lysine methyl ester

chorismate

(3E)-2-oxohex-3-enedioate

fumarate

succinate

(S)-malate

D-glucarate

D-galactarate

α,ω-9Z-octadecenedioate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

pyruvate

2-oxoglutarate

propanoate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-D-glutamate

L-alanyl-L-glutamate

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a methyl group

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

hydrogen cyanide

cob(I)inamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

siroheme

hydrogen sulfide

oxygen

2-iminobutanoate

2-iminosuccinate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

4-dimethylaminophenylazobenzene

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-citramalate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-heptaprenyl)benzene-1,2-diol

3-(all-trans-octaprenyl)benzene-1,2-diol

3-(all-trans-nonaprenyl)benzene-1,2-diol

3-(all-trans-decaprenyl)benzene-1,2-diol

2-decaprenylphenol

2-nonaprenylphenol

2-heptaprenylphenol

2-octaprenylphenol

2-methoxy-6-(all-trans-heptaprenyl)phenol

2-methoxy-6-(all-trans-nonaprenyl)phenol

6-(all-trans-decaprenyl)-2-methoxy-phenol

2-methoxy-6-(all-trans-octaprenyl)phenol

preQ₀

paraoxon

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

Fe³⁺

H⁺

ammonium

K⁺

Fe²⁺

Ni²⁺

Zn²⁺

Cu²⁺

Co²⁺

Mg²⁺

Pb²⁺

Hg²⁺

Cd²⁺

Mn²⁺

Mo²⁺

molybdate

OH^-

selenite

selenate

superoxide

tetrathionate

thiosulfate

sulfite

nitrate

hydrogencarbonate

selenide

hydrogensulfite

sulfate

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

nitric oxide