an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

L-gulono-1,4-lactone

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

(R)-2,3-dihydroxy-3-methylpentanoate

diethylthiophosphate

diethylphosphate

dimethylthiophosphate

3-methyl-2-butenal

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7-α,12-α-dihydroxy-3-oxochol-4-enoate

12-α-hydroxy-3 oxochola-4,6-dienoate

salicyl alcohol

methylsalicylate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

3'-phosphoadenylyl-sulfate

(L-seryl)adenylate

(2,3-dihydroxybenzoyl)adenylate

acetoacetate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(R)-pantothenate

5-androstene-3,17-dione

5-α-androstan-3β,17β-diol

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

3-hydroxypropanoate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

3-dehydroquinate

(S)-dihydroorotate

orotidine 5'-phosphate

(R)-4-phosphopantoate

(R)-4'-phosphopantothenate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

dethiobiotin

histidinal

histidinol

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

benzoylsuccinyl-CoA

DNA without lesion

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

L-arginino-succinate

canavaninosuccinate

L-canavanine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

(S)-mandelate

(R)-mandelate

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

phthalate

phthalate 4,5-cis-dihydrodiol

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

succinate semialdehyde

shikimate

3-dehydroshikimate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

ethanolamine

prephenate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

1,4-dihydroxy-2-naphthoate

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

(S)-4-amino-5-oxopentanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

carbamoyl phosphate

carboxyphosphate

mycothione

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

glycolate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

oxaloacetate

5-oxo-L-proline

xanthine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

carbonyl sulfide

oxalosuccinate

4-aminobutanoate

(4-hydroxyphenyl)acetate

3-oxopropanoate

3-phosphooxypyruvate

coproporphyrinogen III

4-hydroxy-2-nonenal

2-maleylacetate

hydrogenobyrinate a,c-diamide

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

hydrogenobyrinate

S-ribosyl-L-homocysteine

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

(lipoyl)adenylate

2-dehydropantoate

hydrogen peroxide

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

4-amino-4-deoxychorismate

3-(2,3-dihydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

α-D-glucosamine 1-phosphate

glycerone phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

citrate

CO₂

β-nicotinate D-ribonucleotide

quinolinate

isopentenyl diphosphate

prenyl diphosphate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

H₂O

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

ammonia

enol-phenylpyruvate

S-(hydroxymethyl)mycothiol

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

2-pyrone-4,6-dicarboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

autoinducer 2

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

oxidized DCPIP

reduced DCPIP

1,4-dihydroxy-2-naphthoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(S)-4-hydroxy-2-oxohexanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

selenodiglutathione

glutathioselenol

hydrogen selenide

glutathione disulfide

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

isobutanol

dialurate

(R)-1-amino-2-propanol O-2-phosphate

urea

oxalate

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

urea-1-carboxylate

(E)-3-(methoxycarbonyl)pent-2-enedioate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(S)-2,3,4,5-tetrahydrodipicolinate

4'-phosphopantetheine

2-keto-D-gluconate

2,5-didehydro-D-gluconate

thiamine phosphate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

aminoacetone

acetyl phosphate

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

(2S)-2-isopropylmalate

mercuriphenyl acetate

carbonic acid

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

ethylphosphate

hydrogen cyanide

cob(II)yrinate c-monoamide

cobyrinate

cob(I)alamin

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

cob(II)yrinate a,c-diamide

cobalt-precorrin-6B

cobalt-precorrin-6A

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobalamin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

cob(I)inamide

protoheme

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

hydrogen sulfide

oxygen

2-iminobutanoate

2-iminosuccinate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

(S)-3-hydroxy-isobutanoate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

parathion

paraoxon

4-nitrophenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

Fe³⁺

H⁺

ammonium

K⁺

Fe²⁺

Co²⁺

Mo²⁺

Mg²⁺

Hg²⁺

nitrate

superoxide

OH^-

thiosulfate

sulfite

hydrogencarbonate

sulfate

hydrogensulfite

selenite

molybdate

selenate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

(2Z)-2-aminobut-2-enoate

cadaverine

spermidine

putrescine

betaine aldehyde

glycine betaine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

S-(hydroxymethyl)glutathione

mycothiol

glutathione

thiocyanate

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

all-trans-retinyl palmitate

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

4-hydroxybenzoyl-CoA

trans-feruloyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

L-carnitinyl-CoA

crotonobetainyl-CoA

3-hydroxypropanoyl-CoA

2-methylacetoacetyl-CoA

benzoyl-CoA

succinyl-CoA

3'-dephospho-CoA

linoleoyl-CoA

α-linolenoyl-CoA

isobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

acetyl-CoA

malonyl-CoA

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

2-methylbutanoyl-CoA

acryloyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

oxalyl-CoA

formyl-CoA

6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(5Z)-tetradecenoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

choloyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

phytanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

cis-vaccenoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

tributyrin

1,2-dibutyrin

cholest-dien-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

5-α-pregnane-3,20-dione

deoxycholate

cholate

3-dehydrocholate

progesterone

androsterone

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

cholesterol

cholest-5-en-3-one

17-α-hydroxyprogesterone

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

campest-4-en-3-one

5α-androstane-3,17-dione

testosterone

campesterol

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

riboflavin

nicotinate

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FMNH₂

FMN

FAD

FADH₂

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

ubiquinol-10

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

3-demethylubiquinol-10

dIDP

dITP

IDP

cyclic-GMP

cyclic-AMP

pppGpp

ppGpp

2'-deoxyguanosine

hypoxanthine

2'-deoxyadenosine

2'-deoxyinosine

XMP

5'-deoxyadenosine

ITP

IMP

dATP

dAMP

GTP

GMP

dGTP

dGMP

dADP

dGDP

GDP

AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

ATP

ADP

isoguanine

8-oxo-dGTP

8-oxo-GTP

adenylo-succinate

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

adenosine

inosine

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dUTP

dCTP

dTTP

CTP

UTP

dUMP

dCMP

dTMP

CMP

UMP

dTDP

dUDP

dCDP

UDP

CDP

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

GDP-α-D-mannose

GDP-α-D-glucose

ADP-α-D-glucose

uracil

thymine

guanine

adenine

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

(R)-lipoate

coenzyme A

molybdopterin

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

(S)-1-pyrroline-5-carboxylate

1-piperideine

precorrin-3A

precorrin-3B

precorrin-4

precorrin-5

precorrin-7

precorrin-8x

precorrin-6B

precorrin-1

precorrin-2

precorrin-6A

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

orotate

quercetin

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxyacetophenone

urate

benzene

amino-parathion

methyl parathion

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-aminophenol

hydroquinone

2,3-dihydroxybenzoate

catechol

protocatechuate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

enterobactin

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

ferulate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

salicylate

trans-cinnamate

5-chloroprotocatechuate

4-aminobenzoate

diacetyl

acetone

methylglyoxal

glycolaldehyde

formaldehyde

acetaldehyde

1-octanal

1-propanal

isobutanal

D-glyceraldehyde

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

methanol

ethanol

1-octanol

glycerol

D-mannitol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α-maltose

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α-maltose 1-phosphate

α,α-trehalose 6-phosphate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-gulonate

D-gluconate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

apo-4'-lycopenal

torulene

4'-apo-β-carotenal

all-trans-3,4-didehydrolycopene

(1S,4R)-1-hydroxymenth-8-en-2-one

(1R,4S)-1-hydroxymenth-8-en-2-one

(+)-(1S,4R)-limonene-1,2- epoxide

3-oxo-24-ethyl-cholest-5-ene

3-oxo-24-ethyl-cholest-4-ene

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

phlorisovalerophenone

deoxyhumulone

deoxycohumulone

4-prenylphlorisovalerophenone

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

chorismate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

L-aspartate

succinate

fumarate

(S)-malate

α,ω-9Z-octadecenedioate

(2R,3S)-2-methylisocitrate

3-carboxy-cis,cis-muconate

cis-aconitate

trans-aconitate

D-threo-isocitrate

3-oxoadipate

(3R)-3-isopropenyl-6-oxoheptanoate

(3S)-3-isopropenyl-6-oxoheptanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxobutanoate

pyruvate

2-oxoglutarate

formate

acetate

propanoate

butanoate

(S)-lactate

(R)-lactate

decanoate

7-hydroxylaurate

laurate

octanoate

(15Z)-tetracosenoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

stearate

palmitate

oleate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

phytenate

(R)-pantoate

carbamate

L-α-amino-ε-keto-pimelate

L-serine

L-asparagine

L-tyrosine

L-threonine

L-glutamine

glycine

L-cysteine

L-arginine

L-histidine

L-lysine

L-glutamate

L-phenylalanine

L-proline

L-tryptophan

L-alanine

L-isoleucine

L-leucine

L-valine

L-methionine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-alanine

L-cystathionine

L,L-diaminopimelate

L-ornithine

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

L-2-amino-3-oxobutanoate

sarcosine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-phospho-L-serine

S-methyl-L-cysteine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

L-glutamate-5-semialdehyde

L-canaline

L-aspartate 4-semialdehyde

L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

O-succinyl-L-homoserine

O-phospho-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine