an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-oxoglutaramate

2-keto-L-gulonate

(S)-ureidoglycolate

2,5-dioxopentanoate

1,4-dihydroxy-2-naphthoyl-CoA

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

glutathione disulfide

2-amino-3-carboxymuconate-6-semialdehyde

hydrogen selenide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

aminoacetone

thiamine phosphate

2-maleylacetate

O-acetyl-L-serine

dihydroxyacetone

α-D-glucosamine 1-phosphate

3'-phosphoadenylyl-sulfate

pinocembrin chalcone

phloretin

(E)-4-coumaroyl-CoA

5-enolpyruvoyl-shikimate 3-phosphate

L-histidinol phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

4-hydroxy-2-nonenal

butanoyl phosphate

3-dehydroquinate

β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine

shikimate 3-phosphate

4-amino-4-deoxychorismate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

shikimate

3-dehydroshikimate

L-selenocystathionine

prephenate

porphobilinogen

preuroporphyrinogen

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

oxalosuccinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

S-ribosyl-L-homocysteine

autoinducer 2

carbonic acid

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoate

3-phosphooxypyruvate

oligosaccharide with β-D-xylopyranosyl-(1->4)-β-D-xylopyranosyl-(1->4)-β-D-xylopyranose at the reducing end

oligosaccharide with β-D-xylopyranosyl-(1->4)-α-D-xylopyranose at the reducing end

(R)-pantothenate

(R)-4'-phosphopantothenate

ethanolamine

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

β-D-ribosylnicotinate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

L-arginino-succinate

canavaninosuccinate

L-canavanine

creatinine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

salicyl alcohol

methylsalicylate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

histidinal

histidinol

DNA without lesion

hydroxypyruvate

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

cyclopentanol

cyclopentanone

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

urea

S-methyl-5'-thioadenosine

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

acetyl phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

N-Formyl-L-kynurenine

5-methylcytosine

3-mercaptopyruvate

γ-L-glutamyl 5-phosphate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

5-dehydro-4-deoxy-D-glucarate

N-(5-phosphoribosyl)-anthranilate

muconolactone

(+)-muconolactone

cis,cis-muconate

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

5-carboxymethyl-2-hydroxymuconate

L-β-lysine

xanthine

isopentenyl diphosphate

4-imidazolone-5-propanoate

urocanate

formamide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

nicotinate adenine dinucleotide

squalene

hop-22(29)-ene

β-nicotinate D-ribonucleotide

glycerone phosphate

quinolinate

(R)-2,3-dihydroxy-3-methylpentanoate

5-dehydro-D-gluconate

D-gluconate 6-phosphate

prenyl diphosphate

2-C-methyl-D-erythritol 4-phosphate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

propanoyl phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

orotidine 5'-phosphate

(S)-dihydroorotate

4'-phosphopantetheine

oxaloacetate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

(S)-mandelate

(R)-mandelate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

7-carboxy-7-deazaguanine

2-keto-D-gluconate

2,5-didehydro-D-gluconate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-(γ-L-glutamylamino)butanoate

4-aminobutanoate

anthranilate

3-hydroxyanthranilate

3-oxopropanoate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

selenophosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

phosphoenolpyruvate

O-ureido-L-homoserine

carbamoyl phosphate

carboxyphosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(lipoyl)adenylate

hydrogen peroxide

citrate

glycolate

(4-hydroxyphenyl)acetate

2-dehydropantoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

S-adenosyl 3-(methylsulfanyl)propylamine

coproporphyrinogen III

CO₂

3-ureidopropanoate

5-oxo-L-proline

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

acetoacetate

H₂O

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

4-oxoglutaramate

selenodiglutathione

glutathioselenol

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(glutathion-S-yl)-4-hydroxy-2-nonenal

phenylacetate

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

Mg-protoporphyrin

hemin

protoheme

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(indole-3-yl)acetonitrile

preQ₀

DNA with lesion

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

(S)-ureidoglycine

4-methylphenol

L-homocysteine

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

Fe³⁺

H⁺

Na⁺

K⁺

ammonium

Mg²⁺

Fe²⁺

Mo²⁺

Mn²⁺

Zn²⁺

Co²⁺

OH^-

superoxide

thiosulfate

sulfite

nitrate

selenide

hydrogencarbonate

molybdate

selenate

sulfate

hydrogensulfite

selenite

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

nitric oxide

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycine betaine

betaine aldehyde

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

spermidine

putrescine

spermine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

S-(hydroxymethyl)glutathione

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

methylacrylyl-CoA

dihydro-4-coumaroyl-CoA

isovaleryl-CoA

5-aminolevulinyl-CoA

4-hydroxybenzoyl-CoA

malonyl-CoA

3'-dephospho-CoA

succinyl-CoA

isobutanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

phenylacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

cis-vaccenoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

methane

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

glycocholate

cholate

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

riboflavin

nicotinate

thiamine

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

pyridoxal

pyridoxal 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

FMNH₂

FMN

FADH₂

FAD

NADPH

NADH

NADP⁺

NAD⁺

(R)-NADHX

(S)-NADHX

caldariellaquinone

caldariellaquinol

ubiquinol-8

menaquinol-8

menaquinol-7

demethylmenaquinol-8

demethylmenaquinol-7

3-demethylubiquinol-8

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

8-oxo-GTP

8-oxo-GMP

dAMP

dGMP

dIDP

dITP

IDP

ITP

8-oxo-dGTP

8-oxo-dGMP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

XMP

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

hypoxanthine

IMP

GMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

dGTP

dATP

pppGpp

ppGpp

5'-deoxyadenosine

dADP

dGDP

GDP

GTP

ATP

ADP

AMP

isoguanine

5-fluorouracil

5-fluorocytosine

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

two adjacent thymidines in DNA

xanthosine

guanosine

inosine

adenosine

uridine

cytidine

2'-deoxycytidine

thymidine

2'-deoxyuridine

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

dCTP

dTTP

dUTP

UTP

CTP

dCMP

dTMP

dUMP

UMP

CMP

dTDP

dCDP

dUDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

uridine 3'-monophosphate

cytidine-3'-monophosphate

ADP-α-D-glucose

preQ₁

thymine

uracil

cytosine

guanine

adenine

5,6-dihydrouracil

5,6-dihydrothymine

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-galactosamine

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

(R)-lipoate

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

orotate

2',4,4',6'-tetrahydroxychalcone

isoliquiritigenin

baicalein

6,7-dehydrobaicalein

urate

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

6-isobutyl-4-hydroxy-2-pyrone

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3,4-dihydroxyphenylacetate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

diacetyl

2,5-piperidinedione

methylglyoxal

glycolaldehyde

butan-1-al

formaldehyde

acetaldehyde

D-glyceraldehyde

α-D-ribofuranose

α-D-xylopyranose

β-D-xylopyranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

butan-1-ol

methanol

ethanol

glycerol

myo-inositol

D-ononitol

D-galactosylononitol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

galactinol

1-(β-D ribofuranosyl)nicotinamide

aldehydo-D-galacturonate

raffinose

stachyose

sucrose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^G-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

L-idonate

D-altronate

D-mannonate

D-gluconate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

betanidin

betanidin quinone

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

allantoate

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

chorismate

(3E)-2-oxohex-3-enedioate

D-galactarate

α,ω-9Z-octadecenedioate

fumarate

succinate

L-aspartate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

3-oxoadipate

3-phenyl-2-oxopropanoate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

glyoxylate

2-oxobutanoate

acetate

formate

propanoate

(R)-lactate

butanoate

decanoate

7-hydroxylaurate

laurate

octanoate

(R)-3-hydroxybutanoate

sophorosyloxydocosanoate

13-sophorosyloxydocosanoate 6',6''-diacetate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

(15Z)-tetracosenoate

leukotriene-E4

leukotriene-D4

linoleate

α-linolenate

stearate

palmitate

oleate

phytenate

(R)-pantoate

D-tagaturonate

L-kynurenine

carbamate

D-serine

L-serine

L-lysine

L-histidine

L-arginine

L-glutamate

L-asparagine

L-tyrosine

L-threonine

L-glutamine

glycine

L-cysteine

creatine

β-alanine

(R)-β-lysine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-leucine

L-alanine

L-proline

D-glutamate

L-phenylalanine

L-selenocysteine

L-valine

L-isoleucine

L-tryptophan

L-methionine

D-aspartate

D-alanine

L,L-diaminopimelate

L-cystathionine

L-aspartyl-4-phosphate

L-ornithine

L-isoglutamine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

2-hydroxy-5-oxoproline

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

O-succinyl-L-homoserine

O-phospho-L-homoserine

L-homoserine

hypoglycin A

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-canaline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

meso-diaminopimelate

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine