an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(3E)-2-oxopent-3-enoate

1,2-dihydro-β-NADP

enol-phenylpyruvate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

1-pyrroline

5-hydroxyindole thiazolidine carboxylate

aminoacetone

ammonia

selenodiglutathione

glutathioselenol

2,2',3,3'-tetrahydroxybiphenyl

2,2',3-trihydroxybiphenyl

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

pyrogallol

2-dehydro-6-phospho-D-gluconate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

6-aminohexanoate cyclic dimer

6-oxohexanoate

adipate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

shikimate 3-phosphate

prephenate

S-ribosyl-L-homocysteine

autoinducer 2

H₂

4-aminobutanoate

glutathione disulfide

chloroacetaldehyde

(R)-2,3-dihydroxy-3-methylpentanoate

2,3-epoxy-2,3-dihydrobenzoyl-CoA

trans-2,3-dehydroadipyl-coA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

citraconate

(2R,3S)-3-methylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

N-carbamoylputrescine

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

N-ethylmaleimide

N-ethylsuccinimide

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

7-carboxy-7-deazaguanine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

N-(5-phosphoribosyl)-anthranilate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

pyrazine-2-carboxylate

D-gluconate 6-phosphate

D-erythro-imidazole-glycerol-phosphate

4-fumaryl-acetoacetate

lipid IV_A

DNA without lesion

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

α-D-ribose 1,5-bisphosphate

4-hydroxybenzaldehyde

α-D-glucosamine 1-phosphate

4-maleyl-acetoacetate

N-(2,3-dihydroxybenzoyl)-L-serine dimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine trimer

31-O-desmethylFK-506

FK-506

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

urea-1-carboxylate

(R)-pantothenate

(R)-4'-phosphopantothenate

N⁵-carboxyaminoimidazole ribonucleotide

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(S)-ureidoglycolate

L-arogenate

3-hydroxyanthranilate

2-amino-3-carboxymuconate-6-semialdehyde

salicyl alcohol

methylsalicylate

6-phospho D-glucono-1,5-lactone

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-phosphoglycolate

tert-butylamine

(R)-piperazine-2-carboxylate

β-alaninamide

3-deoxy-D-manno-octulosonate 8-phosphate

cis,cis-muconate

N²-succinylglutamate

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

thiamine phosphate

thiamine diphosphate

4-imidazolone-5-propanoate

urocanate

anthranilate

N-Formyl-L-kynurenine

6-aminohexanoate linear dimer

6-aminohexanoate

2-C-methyl-D-erythritol 4-phosphate

15-cis-4,4'-diapophytoene

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

3-phosphooxypyruvate

L-selenocystathionine

(S)-2,3,4,5-tetrahydrodipicolinate

propane-1,3-diamine

(R)-6-hydroxynicotine

6-hydroxy-N-methylmyosmine

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

1,2-dichloroethane

2-chloroethanol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-keto-D-gluconate

hydroxypyruvate

tartronate semialdehyde

acetyl phosphate

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

3-methylbutanol

3-methylbutanal

isobutanol

2-methylbutanol

2-methylbutanal

2-phenylethanol

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

(4-hydroxyphenyl)acetate

formamide

5-enolpyruvoyl-shikimate 3-phosphate

4'-phosphopantetheine

orotidine 5'-phosphate

3-deoxy-α-D-manno-2-octulosonate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

histamine

shikimate

3-dehydroshikimate

4-pyridoxolactone

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

α-ribazole 5'-phosphate

α-ribazole

3'-phosphoadenylyl-sulfate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

poly (glycerol phosphate)

o-(α-D-glucosyl)-polyglycerol phosphate

5-amino-6-(D-ribitylamino)uracil

prenyl diphosphate

cis-3,4-dehydroadipyl-CoA semialdehyde

cis-3,4-dehydroadipyl-CoA

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

β-D-ribosylnicotinate

2-maleylacetate

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

lipid X

lipid A disaccharide (E. coli)

creatinine

(2-hydroxyphenyl)acetate

homogentisate

xanthine

glycerone phosphate

citrate

succinate semialdehyde

3-methyl-2-oxobutanoate

2-dehydropantoate

oxalosuccinate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

isopentenyl diphosphate

2,6-dioxo-6-phenylhexa-3-enoate

(2Z,2E)-2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate

(2Z,2E)-2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate

2-oxopent-4-enoate

4-amino-4-deoxychorismate

3-amino-1-hydroxyacetone 1-phosphate

carbonic acid

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

oxaloacetate

phosphoenolpyruvate

carbamoyl phosphate

carboxyphosphate

nicotinate adenine dinucleotide

1-phosphatidyl-myo-inositol

1-phosphatidyl-myo-inositol 2-mannose

porphobilinogen

preuroporphyrinogen

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

hydrogen selenide

O-acetyl-L-serine

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-succinyl-L,L-2,6-diaminopimelate

canavaninosuccinate

L-arginino-succinate

coproporphyrinogen III

glycolate

N-benzylformamide

benzylamine

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

hydrogen peroxide

(S)-dihydroorotate

acetoacetate

2-aminomalonate semialdehyde

2-aminoacetaldehyde

β-nicotinate D-ribonucleotide

quinolinate

3-demethylubiquinol-6

pimeloyl-CoA

dethiobiotin

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

dihydrolipoamide

S-acetyldihydrolipoamide

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

L-canavanine

urea

1,4-dihydroxy-2-naphthoate

CO₂

H₂O

histidinal

histidinol

imidazole acetol-phosphate

L-histidinol phosphate

(S)-nipecotate

DNA with lesion

4-methylphenol

L-homocysteine

ethylphosphate

hydrogen cyanide

adenosylcobalamin

chlorophyllide a

chlorophyll a

Mg-protoporphyrin

adenosylcobalamin 5'-phosphate

protoheme

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

CMP-N-acetyl-β-neuraminate

(R)-citramalate

3-(all-trans-nonaprenyl)benzene-1,2-diol

3-(all-trans-decaprenyl)benzene-1,2-diol

3-(all-trans-heptaprenyl)benzene-1,2-diol

3-(all-trans-octaprenyl)benzene-1,2-diol

2-octaprenylphenol

2-heptaprenylphenol

2-nonaprenylphenol

2-methoxy-6-(all-trans-nonaprenyl)phenol

6-(all-trans-decaprenyl)-2-methoxy-phenol

2-methoxy-6-(all-trans-heptaprenyl)phenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2,5-dichlorophenol

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-9

ubiquinol-10

menaquinol-12

menaquinol-9

menaquinol-10

menaquinol-11

menaquinol-7

menaquinol-8

menaquinol-6

menaquinol-13

demethylmenaquinol-12

demethylmenaquinol-10

demethylmenaquinol-7

demethylmenaquinol-13

demethylmenaquinol-8

demethylmenaquinol-11

demethylmenaquinol-9

demethylmenaquinol-6

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-10

caldariellaquinone

NADPH

NADH

NADP⁺

NAD⁺

glycine betaine

N,N-dimethylglycine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

N-acetyl-β-neuraminate

Fe³⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

hydrogensulfite

selenite

sulfate

OH^-

sulfite

molybdate

hydrogencarbonate

selenate

thiosulfate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

3-sulfocatechol

(R)-S-lactoylglutathione

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

spermidine

putrescine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-D-glutamate

L-alanyl-L-glutamate

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

salicylaldehyde

2,2'-dihydroxybiphenyl

urate

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

4-hydroxyacetophenone

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

hydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-heptaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-nonaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-heptaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-nonaprenyl-1,4-benzoquinol

4-hydroxybenzyl alcohol

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

kaempferol

quercetin

myricetin

(+)-taxifolin

2',4,4',6'-tetrahydroxychalcone

(+)-dihydrokaempferol

(+)-dihydromyricetin

protocatechuate

4-methylcatechol

3-methylcatechol

catechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

2,3-dihydroxybenzoate

enterobactin

salicylate

benzoate

4-aminobenzoate

preQ₀

molybdopterin

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

MoO₂-molybdopterin cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

nicotinamide

riboflavin

nicotinate

pyridoxal

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

menadione

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

cholest-4-en-3-one

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

cholesterol

cholest-5-en-3-one

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

trans-dienelactone

cis-dienelactone

L-homoserine lactone

VAI-1

HAI-1

VAI-1-2

PAI-1

AAI-1

PAI-1-2

D-glucono-1,5-lactone

all-trans-retinyl palmitate

2-methylbutanoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

4-hydroxybenzoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

CoA-disulfide

linoleoyl-CoA

α-linolenoyl-CoA

(E)-glutaconyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

malonyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

myristoyl-CoA

palmitoyl-CoA

stearoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

6-caprolactam

(7R)-7 aminocephalosporanate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

pyrazinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(R)-piperazine-2-carboxamide

(R)-piperazine-2-tert-butylcarboxamide

(R)-piperidine-3-carboxamide

3-oxo-dodecanoate

3-oxooctanoate

chorismate

L-aspartate

succinate

fumarate

(S)-malate

α,ω-9Z-octadecenedioate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-oxohexanoate

pyruvate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

butanoate

7-hydroxylaurate

decanoate

laurate

octanoate

(R)-3-hydroxybutanoate

16-hydroxypalmitate

18-hydroxystearate

18-hydroxyoleate

(15Z)-tetracosenoate

oleate

palmitate

stearate

linoleate

α-linolenate

phytenate

(R)-pantoate

D-gluconate

orotate

(S)-1-pyrroline-5-carboxylate

L-kynurenine

carbamate

L-serine

creatine

β-alanine

L-leucine

L-glutamine

L-proline

glycine

L-alanine

D-glutamate

L-glutamate

L-lysine

L-arginine

L-histidine

L-tyrosine

L-tryptophan

L-phenylalanine

D-lysine

D-threonine

D-alanine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

3-phospho-L-serine

sarcosine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

L-2-acetamido-6-oxoheptanedioate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-isoglutamine

L-cysteine

L-cystathionine

L-2,4-diaminobutanoate

L-threonine

L-valine

L-asparagine

L-isoleucine

L-selenocysteine

L,L-diaminopimelate

L-ornithine

L-methionine

L-citrulline

1-aminocyclopropane-1-carboxylate

O-succinyl-L-homoserine

L-homoserine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

hypoglycin A

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-canaline

meso-diaminopimelate

D-allothreonine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

hypoglycin B

1-oleoyl-2-palmitoyl-phosphatidylglycerol

butan-1-ol

propan-1-ol

methanol

ethanol

phytol

myo-inositol

scyllo-inosose

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 5-monophosphate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

all-trans-4,4'-diaponeurosporene

all-trans-4,4'-diapo-ζ-carotene

all-trans-4,4'-diapophytofluene

geranyl diphosphate

trans,octacis-decaprenyl phosphate

all-trans-4,4'-diapolycopene

phytyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-dodecaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-tridecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-undecaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

phlorisovalerophenone

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

cocaine

ecgonine methyl ester

ferric-enterobactin complex

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

1-(β-D ribofuranosyl)nicotinamide

4-O-β-D-mannopyranosyl-N-acetyl-D-glucosamine

α,α-trehalose

β-D-fructofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

D-glyceraldehyde

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

mannosylfructose-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

ADP-α-D-glucose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-N^ε-D-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannuronate

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-malic semialdehyde

diacetyl

6-hydroxypseudooxynicotine

methylglyoxal

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

1-octanal

butan-1-al

1-propanal

isobutanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

phytenal

precorrin-1

precorrin-2

sirohydrochlorin

dTDP

dCTP

dTTP

dCMP

uracil

dUDP

dCDP

CDP

dTMP

CTP

dUTP

dUMP

UTP

UDP

CMP

UMP

uridine

cytidine

2'-deoxycytidine

thymidine

2'-deoxyuridine

thymine

hypoxanthine

adenine

guanine

isoguanine

preQ₁

xanthosine

adenosine

inosine

guanosine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

ITP

GTP

ATP

IDP

GDP

ADP

XMP

IMP

GMP

AMP

dITP

dATP

dGTP

dIDP

dGDP

dADP

dGMP

dAMP

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

8-oxo-GTP

8-oxo-dGTP

ppGpp

pppGpp

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA