an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2,3,4,5-tetrahydrodipicolinate

H₂

4'-phosphopantetheine

hydrogen selenide

O-acetyl-L-serine

3-dehydroshikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

prephenate

5-enolpyruvoyl-shikimate 3-phosphate

4-hydroxy-2-nonenal

prenyl diphosphate

2-dehydropantoate

xanthine

lipid A disaccharide (E. coli)

lipid IV_A

5-methoxytryptamine

5-methoxyindoleacetaldehyde

tryptamine

4-acetamidobutanal

methylamine

3,4-dihydroxyphenylacetaldehyde

L-canavanine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

carboxyphosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

5-amino-6-(D-ribitylamino)uracil

(E)-4-coumaroyl-CoA

N-(5-phosphoribosyl)-anthranilate

2-(α-hydroxyethyl)thiamine diphosphate

orotidine 5'-phosphate

α-D-galactosyl-diphosphoundecaprenol

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

selenophosphate

cis-stilbene oxide

(1R,2R)-1,2-diphenylethane-1,2-diol

3-amino-1-hydroxyacetone 1-phosphate

citrate

acetyl phosphate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

thiamine phosphate

thiamine diphosphate

glycerone phosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

shikimate

shikimate 3-phosphate

salicyl alcohol

methylsalicylate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

7,8-diaminopelargonate

succinate semialdehyde

dethiobiotin

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-dehydro-3-deoxy-D-gluconate

tartronate semialdehyde

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

S-ribosyl-L-homocysteine

hydrogen peroxide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N-carbamoylputrescine

glycolate

hydroxypyruvate

N-acetyl-L,L-2,6-diaminopimelate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3-deoxy-D-manno-octulosonate 8-phosphate

2-C-methyl-D-erythritol 4-phosphate

(S)-dihydroorotate

arsenite

isopentenyl diphosphate

urea

β-D-ribosylnicotinate

coproporphyrinogen III

oxalosuccinate

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

3-methylbutanol

3-methylbutanal

isobutanol

2-methylbutanol

2-methylbutanal

2-phenylethanol

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

carbamoyl phosphate

β-nicotinate D-ribonucleotide

quinolinate

pseudouridine 5'-phosphate

4-amino-4-deoxychorismate

oxaloacetate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

ethanolamine

L-fuconate

2-dehydro-3-deoxy-L-fuconate

acetoacetate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

CO₂

H₂O

phosphoenolpyruvate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

(3E)-2-oxopent-3-enoate

1,2-dihydro-β-NADP

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2E)-2-hydroxypenta-2,4-dienoate

5-hydroxyindole thiazolidine carboxylate

ammonia

pseudouridine

1,4-dihydroxy-2-naphthoate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

N⁵-carboxyaminoimidazole ribonucleotide

selenodiglutathione

glutathioselenol

2,5-dioxopentanoate

N-succinyl-L,L-2,6-diaminopimelate

autoinducer 2

7-carboxy-7-deazaguanine

2-amino-3-carboxymuconate-6-semialdehyde

preuroporphyrinogen

(S)-2-amino-6-oxohexanoate

2-maleylacetate

aminoacetone

oxythiamine

pyrithiamine

histidinal

dihydroxyacetone

S-formylglutathione

31-O-desmethylFK-506

FK-506

2-iminoacetate

N-acetyl-D-muramate 6-phosphate

propanoyl phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

carbonic acid

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

DNA without lesion

pimeloyl-CoA

4-fumaryl-acetoacetate

2,6-dioxo-6-phenylhexa-3-enoate

2-oxopent-4-enoate

N-succinyl-2-amino-6-ketopimelate

5-dehydro-4-deoxy-D-glucarate

creatinine

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

porphobilinogen

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

glutathione disulfide

nicotinate adenine dinucleotide

L-arogenate

(R)-4'-phosphopantothenoyl-L-cysteine

1-deoxy-L-glycero-tetrulose 4-phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

anthranilate

α-D-glucosamine 1-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

lipid X

γ-L-glutamyl 5-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-pyrimidinemethanol

dihydrolipoamide

S-acetyldihydrolipoamide

L-histidinol phosphate

histidinol

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

3-deoxy-α-D-manno-2-octulosonate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

ethylphosphate

N₂

adenosylcobalamin

cob(I)alamin

Mg-protoporphyrin

cob(I)inamide

adenosylcobinamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

protoheme

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

siroheme

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(R)-citramalate

3-(all-trans-octaprenyl)benzene-1,2-diol

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

bromochloromethane

(S)-2-chloropropanoate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

FMN

FAD

FMNH₂

(R)-NADHX

(S)-NADHX

caldariellaquinol

ubiquinol-8

menaquinol-12

menaquinol-9

menaquinol-10

menaquinol-11

menaquinol-7

menaquinol-8

menaquinol-6

menaquinol-13

demethylmenaquinol-12

demethylmenaquinol-9

demethylmenaquinol-10

demethylmenaquinol-11

demethylmenaquinol-7

demethylmenaquinol-8

demethylmenaquinol-6

demethylmenaquinol-13

3-demethylubiquinol-8

caldariellaquinone

NADPH

NADH

NADP⁺

NAD⁺

superoxide

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

Fe³⁺

K⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

Cd²⁺

Zn²⁺

Cu²⁺

thiosulfate

sulfite

selenide

nitrite

nitrate

hydrogencarbonate

hydrogensulfite

sulfate

selenite

OH^-

selenate

phosphate

triphosphate

diphosphate

bromide

chloride

methionol

3-(methylsulfanyl)propanal

S-(hydroxymethyl)glutathione

glutathione

methanethiol

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

choline

choline sulfate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

N-acetylputrescine

dehydrospermidine

spermidine

putrescine

cadaverine

tyramine

2-phenylethylamine

serotonin

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-D-glutamate

glycyl-L-asparagine

L-alanyl-L-leucine

L-alanyl-L-glutamine

glycyl-L-aspartate

glycyl-L-glutamine

L-alanyl-L-threonine

L-alanyl-glycine

glycyl-L-methionine

glycyl-L-proline

glycyl-L-glutamate

L-alanyl-L-glutamate

L-alanyl-L-histidine

L-alanyl-L-aspartate

L-cysteinylglycine

L-methionyl-L-alanine dipeptide

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-tyrosol

urate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

metanephrine

normetanephrine

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

coumarinate

(+)-taxifolin

2',4,4',6'-tetrahydroxychalcone

(+)-dihydromyricetin

(+)-dihydrokaempferol

(2R,3S,4S)-leucodelphinidin

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucocyanidin

coumarin

(R)-noradrenaline

(R)-adrenaline

dopamine

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

salicylate

4-aminobenzoate

benzoate

preQ₀

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

MoO₂-molybdopterin cofactor

cytidylyl molybdenum cofactor

riboflavin

nicotinamide

nicotinate

thiamine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

menadione

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

all-trans-retinyl palmitate

3'-dephospho-CoA

succinyl-CoA

malonyl-CoA

isobutanoyl-CoA

acetyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

phytanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

stearoyl-CoA

palmitoyl-CoA

palmitoleoyl-CoA

cephalosporin C

(7R)-7 aminocephalosporanate

deacetylcephalosporin C

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

chorismate

fumarate

succinate

L-aspartate

(S)-malate

D-galactarate

α,ω-9Z-octadecenedioate

(2R)-homocitrate

cis-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-homoaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

pyruvate

acetate

formate

(R)-lactate

(S)-lactate

7-hydroxylaurate

decanoate

laurate

octanoate

(R)-3-hydroxybutanoate

16-hydroxypalmitate

18-hydroxystearate

18-hydroxyoleate

(15Z)-tetracosenoate

leukotriene-D4

leukotriene-E4

palmitate

oleate

stearate

linoleate

α-linolenate

phytenate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

orotate

(R)-pantoate

D-gluconate

D-mannonate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

4-deoxy-L-erythro-hex-4-enopyranuronate

4-deoxy-L-threo-hex-4-enopyranuronate

aldehydo-D-galacturonate

carbamate

L-α-amino-ε-keto-pimelate

L-serine

creatine

β-alanine

L-proline

L-leucine

L-alanine

L-glutamine

glycine

D-glutamate

L-glutamate

L-threo-3-phenylserine

L-histidine

L-arginine

L-lysine

L-phenylalanine

L-tryptophan

L-tyrosine

D-alanine

D-threonine

S-sulfanyl-L-cysteine

L-aspartyl-4-phosphate

L-saccharopine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

sarcosine

N-carbamoyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-selenocysteine

L-isoleucine

L-valine

L,L-diaminopimelate

L-asparagine

L-threonine

L-cystathionine

L-ornithine

L-methionine

L-cysteine

L-citrulline

L-cystine

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-canaline

hypoglycin A

meso-diaminopimelate

L-allo-threonine

D-allothreonine

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

hypoglycin B

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

glycerol

methanol

propan-1-ol

ethanol

butan-1-ol

phytol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 5-monophosphate

geranyl diphosphate

trans,octacis-decaprenyl phosphate

spirilloxanthin

2-hydroxyspirilloxanthin

2,2-dihydroxyspirilloxanthin

echinenone

2'-hydroxy-2-oxospirilloxanthin

2',2'-dihydroxy-2-oxospirilloxanthin

2-oxospirilloxanthin

2,2'-dioxospirilloxanthin

β-carotene

spheroiden-2-ol

2,2-dihydroxyspheroidene

spheroidene

spheroiden-2-one

demethylspheroidene

demethylspheroidenone

di-trans,octa-cis-undecaprenyl phosphate

all-trans-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

1-myristoyl-sn-glycerol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXXG xyloglucan oligosaccharide

unsaturated gellan tetrasaccharide

maltotriose

XLLG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

isoprimeverose

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

maltotetraose

stachyose

maltoheptaose

maltohexaose

maltopentaose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

sucrose

α,α-trehalose

β-D-fructofuranose

β-L-fucopyranose

α-L-fucopyranose

keto-D-fructose

D-xylulose

D-ribulose

L-ribulose

α-D-xylopyranose

α-D-ribofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

L-glyceraldehyde

D-glyceraldehyde

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

L-fuculose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

ADP-α-D-glucose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucuronate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

D-ribulose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

D-altronate

diacetyl

methylglyoxal

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

formaldehyde

1-propanal

isobutanal

acetaldehyde

butan-1-al

(S)-lactaldehyde

phytenal

2-(2-methylpyridin-3-yl)ethanol

precorrin-1

precorrin-2

sirohydrochlorin

dUMP

dUTP

UTP

dCTP

CTP

dUDP

UDP

CDP

dCMP

dCDP

uracil

dTMP

dTDP

formylaminopyrimidine

5-(hydroxymethyl)-2-methyl-4(1H)-pyrimidinone

aminomethylpyrimidine

dTTP

UMP

CMP

uridine

cytidine

2'-deoxycytidine

thymidine

2'-deoxyuridine

hypoxanthine

guanine

adenine

isoguanine

preQ₁

inosine

adenosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

GTP

ATP

ITP

GDP

ADP

IDP

GMP

XMP

IMP

AMP

dATP

dGTP

dITP

dADP

dGDP

dIDP

dAMP

dGMP

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

5'-deoxyadenosine

adenylo-succinate

pppGpp

ppGpp

8-oxo-GTP

8-oxo-dGTP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

(R)-NADPHX

(S)-NADPHX

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA