an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

N-carbamoyl-2-oxoglycine

oxamate

S-ribosyl-L-homocysteine

autoinducer 2

creatinine

selenodiglutathione

glutathioselenol

hydrogen selenide

trans-O-hydroxybenzylidenepyruvate

naphthalene-1,2-diol

6-aminohexanoate cyclic dimer

6-oxohexanoate

adipate

4-aminobutanoate

2-dehydro-3-deoxy-L-galactonate

2-keto-L-gulonate

urea

quinolinate

(S)-ureidoglycolate

D-gluconate 6-phosphate

2,5-dioxopentanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

dialurate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

ethanolamine

(2S)-4-acetamido-2-aminobutanoate

ectoine

phosphocholine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

butyramide

pregn-5-ene-3,20-dione-17-ol

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

pregn-5-ene-3,20-dione

5-androstene-3,17-dione

3-ureidopropanoate

preuroporphyrinogen

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

2-protocatechuoylphloroglucinolcarboxylate

histidinal

acetyl phosphate

(R)-mevalonate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

5-carboxymethyl-2-hydroxymuconate

3-deoxy-α-D-manno-2-octulosonate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

urea-1-carboxylate

5-methylcytosine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

histidinol

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

pimeloyl-CoA

8-amino-7-oxononanoate

(R)-pantothenate

2-dehydro-3-deoxy-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

2,3-dihydroxy-p-cumate

2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate

5-dehydro-D-gluconate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(R)-1-amino-2-propanol O-2-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

diethylthiophosphate

diethylphosphate

dimethylthiophosphate

3-dehydroquinate

hydroxypyruvate

γ-butyrobetaine

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

citraconate

(2R,3S)-3-methylmalate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

shikimate 3-phosphate

orotidine 5'-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

(S)-mandelate

(R)-mandelate

carboxyphosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

coproporphyrinogen III

shikimate

3-dehydroshikimate

D-erythro-imidazole-glycerol-phosphate

S-formylglutathione

6-aminohexanoate linear dimer

6-aminohexanoate

2-maleylacetate

5-oxo-L-proline

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

2-dehydropantoate

2-C-methyl-D-erythritol 4-phosphate

carbonic acid

xanthine

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-manno-octulosonate 8-phosphate

3-hydroxypropanoate

pinocembrin chalcone

phloretin

L-selenocystathionine

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

β-D-ribosylnicotinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

O-acetyl-L-serine

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

β-nicotinate D-ribonucleotide

3-deoxy-D-arabino-heptulosonate 7-phosphate

glutathione disulfide

DNA without lesion

hydrogen peroxide

porphobilinogen

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

propanoyl phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

4-amino-4-deoxychorismate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

L-gulono-1,4-lactone

5-dehydro-4-deoxy-D-glucarate

tartronate semialdehyde

2-aminoacetaldehyde

2-phosphoglycolate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(S)-4-amino-5-oxopentanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-hydroxy-2-nonenal

glycolate

N-methylhydantoin

5-aminolevulinate

5-enolpyruvoyl-shikimate 3-phosphate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

glycerone phosphate

α-D-glucosamine 1-phosphate

acetoacetate

γ-L-glutamyl 5-phosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-imidazolone-5-propanoate

urocanate

4-methyl-2-oxopentanoate

3-oxopropanoate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

carbamoyl phosphate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

L-arginino-succinate

canavaninosuccinate

L-canavanine

N-acetyl-L-glutamate 5-semialdehyde

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

imidazole acetol-phosphate

L-histidinol phosphate

prephenate

(S)-dihydroorotate

isopentenyl diphosphate

oxaloacetate

citrate

anthranilate

phosphoenolpyruvate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

3-mercaptopyruvate

nicotinate adenine dinucleotide

succinate semialdehyde

oxalosuccinate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

5-phospho-β-D-ribosylamine

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

H₂O

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cobalt-sirohydrochlorin

cobalt-precorrin-2

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosylcobyrate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(I)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

protoheme

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

siroheme

oxygen

hydrogen sulfide

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

preQ₀

3-cyanopyridine

propionitrile

acrylonitrile

(indole-3-yl)acetonitrile

n-butyronitrile

parathion

paraoxon

4-nitrophenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

Fe³⁺

ammonium

H⁺

Co²⁺

Fe²⁺

Zn²⁺

Mo²⁺

sulfate

hydrogensulfite

selenite

OH^-

nitrate

selenate

superoxide

sulfite

hydrogencarbonate

molybdate

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycine betaine

betaine aldehyde

choline

betaine aldehyde hydrate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

N-acetylputrescine

cadaverine

spermidine

putrescine

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

sulfoacetaldehyde

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

2-methylbutanoyl-CoA

(3S)-citryl-CoA

(2R,3S)-β-methylmalyl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

isobutanoyl-CoA

dihydro-4-coumaroyl-CoA

isovaleryl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(E)-cinnamoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

cis-vaccenoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

cholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

(25S)-26-oxocholest-4-en-3-one

3-oxocholest-4,24-dien-26-oyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

pregnenolone

3-β-hydroxyandrost-5-en-17-one

cholesterol

cholest-5-en-3-one

17-α-hydroxypregnenolone

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(indol-3-yl)acetate

nicotinamide

nicotinate

riboflavin

L-carnitine

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

menadione

FADH₂

FAD

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-10

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-8

isoguanine

8-oxo-dGTP

8-oxo-GTP

1-(5-phospho-β-D-ribosyl)-AMP

hypoxanthine

pppGpp

ppGpp

2'-deoxyguanosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

2'-deoxyadenosine

2'-deoxyinosine

5'-deoxyadenosine

dAMP

dGMP

dADP

dATP

IDP

ITP

dIDP

dITP

dGDP

dGTP

GMP

IMP

XMP

GTP

GDP

ADP

ATP

AMP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

inosine

adenosine

uridine

cytidine

2'-deoxycytidine

2'-deoxyuridine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

UTP

CTP

dUMP

dCMP

dTMP

CMP

UMP

dTDP

dCDP

dUDP

UDP

CDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

preQ₁

cytosine

thymine

uracil

guanine

adenine

5,6-dihydrouracil

5,6-dihydrothymine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

CDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-4-dehydro-β-L-rhamnose

CDP-4-dehydro-6-deoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

coenzyme A

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

(S)-1-pyrroline-5-carboxylate

precorrin-6A

precorrin-3B

precorrin-1

precorrin-6B

precorrin-7

precorrin-8x

precorrin-4

precorrin-5

precorrin-2

precorrin-3A

sirohydrochlorin

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

orotate

2-hydroxychromene-2-carboxylate

2',4,4',6'-tetrahydroxychalcone

isoliquiritigenin

quercetin

salicylaldehyde

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

naphthalene

urate

6-isobutyl-4-hydroxy-2-pyrone

amino-parathion

methyl parathion

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-aminophenol

2,3-dihydroxybenzoate

protocatechuate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

diacetyl

methylglyoxal

1-octanal

1-propanal

formaldehyde

acetaldehyde

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

methanol

ethanol

1-octanol

sphingosine

sphingosine 1-phosphate

glycerol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

α,α-trehalose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

3,6-anhydro-α-L-galactopyranose

3,6-anhydro-L-galactofuranose

4-deoxy-L-threo-hex-4-enopyranuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

β-D-fructofuranose 1-phosphate

3,6-anhydro-L-galactonate

L-idonate

L-gulonate

D-gluconate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

trans,octacis-decaprenyl phosphate

sitosterol

3-oxo-24-ethyl-cholest-5-ene

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

acetamide

6-caprolactam

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(3E)-2-oxohex-3-enedioate

chorismate

L-aspartate

fumarate

succinate

(S)-malate

D-galactarate

α,ω-9Z-octadecenedioate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

octanoate

7-hydroxylaurate

laurate

decanoate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

oleate

α-linolenate

linoleate

stearate

palmitate

phytenate

(R)-pantoate

L-α-amino-ε-keto-pimelate

carbamate

L-serine

L-cysteine

L-asparagine

L-tyrosine

glycine

L-threonine

L-glutamine

L-histidine

L-lysine

L-arginine

L-glutamate

L-methionine

L-valine

L-alanine

L-tryptophan

L-phenylalanine

L-leucine

L-proline

L-isoleucine

N-carbamoylsarcosine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-glutamate

D-aspartate

D-cysteine

cis-4-hydroxy-D-proline

D-alanine

L-isoglutamine

L,L-diaminopimelate

L-cystathionine

L-2,4-diaminobutanoate

L-aspartyl-4-phosphate

L-ornithine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

seleno-L-homocysteine

L-selenomethionine

L-threonine 3-O-phosphate

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

hypoglycin A

O-succinyl-L-homoserine

L-canaline

S-adenosyl-L-methionine

1-aminocyclopropane-1-carboxylate

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine