an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
(S)-4-hydroxy-2-oxopentanoate
2-oleoylglycerol
3-(2,3-dihydroxyphenyl)propanoate
(1R,2S)-cyclohexa-3,5-diene-1,2-diol
3-phenylpropanoate
3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate
(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate
2,6-dioxo-6-phenylhexa-3-enoate
2-oxopent-4-enoate
tetrahydrogeranylgeranyl diphosphate
dihydrogeranylgeranyl diphosphate
carbon monoxide
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
γ-L-glutamyl 5-phosphate
O-acetyl-L-serine
S-formylglutathione
(4-hydroxyphenyl)acetate
2-phosphoglycolate
glycolate
L-selenocystathionine
lipid X
lipid A disaccharide (E. coli)
3-deoxy-D-manno-octulosonate 8-phosphate
2-succinylbenzoate
butyramide
DNA without lesion
(S)-2-amino-6-oxohexanoate
3-deoxy-D-arabino-heptulosonate 7-phosphate
citraconate
(2R,3S)-3-methylmalate
2-maleylacetate
4-amino-4-deoxychorismate
xanthine
5-androstene-3,17-dione
5-α-androstan-3β,17β-diol
pregn-5-ene-3,20-dione-17-ol
pregn-5-ene-3,20-dione
(S)-5-hydroxyisourate
(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
(2Z,4E)-2-hydroxyhexa-2,4-dienedioate
4-hydroxy-2-nonenal
carbonic acid
5-methylsalicylate
4-methylsalicylate
5-carboxymethyl-2-hydroxymuconate
3-maleylpyruvate
4-methylgentisate
(2E)-3-methyl-4,6-dioxohept-2-enedioate
3-methylgentisate
(2E)-2-methyl-4,6-dioxohept-2-enedioate
cyclohexanone
ε-caprolactone
S-adenosyl 3-(methylsulfanyl)propylamine
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
(S)-4-amino-5-oxopentanoate
pimeloyl-CoA
dethiobiotin
urea
5-deoxy-α-ribose 1-phosphate
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
ADP-D-glycero-β-D-manno-heptose
ADP-L-glycero-β-D-manno-heptose
2-dehydropantoate
3-deoxy-α-D-manno-2-octulosonate
nicotinate adenine dinucleotide
4-phosphooxy-L-threonine
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
3-amino-1-hydroxyacetone 1-phosphate
L-arginino-succinate
O-ureido-L-homoserine
canavaninosuccinate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
succinate semialdehyde
5-amino-6-(5-phospho-D-ribitylamino)uracil
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribosylamino)uracil
1-deoxy-L-glycero-tetrulose 4-phosphate
thiamine phosphate
thiamine diphosphate
5-dehydro-D-gluconate
L-histidinol phosphate
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
2,3-didehydroadipyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
(E)-4-coumaroyl-CoA
6-phospho D-glucono-1,5-lactone
β-D-ribosylnicotinate
(R)-pantothenate
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
N-succinyl-L,L-2,6-diaminopimelate
(S)-dihydroorotate
5-phospho-β-D-ribosylamine
N1-(5-phospho-β-D-ribosyl)glycinamide
preuroporphyrinogen
D-erythro-imidazole-glycerol-phosphate
imidazole acetol-phosphate
hydrogen peroxide
shikimate 3-phosphate
5-aminolevulinate
porphobilinogen
coproporphyrinogen III
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
4-(2'-carboxyphenyl)-4-oxobutyryl-CoA
1,4-dihydroxy-2-naphthoyl-CoA
(S)-2,3,4,5-tetrahydrodipicolinate
N-succinyl-2-amino-6-ketopimelate
propionamide
(indol-3-yl)acetamide
acrylamide
acrylate
4-guanidinobutyramide
4-guanidinobutanoate
phosphoenolpyruvate
acetoacetate
β-nicotinate D-ribonucleotide
quinolinate
oxaloacetate
oxalosuccinate
carbamoyl phosphate
carboxyphosphate
α-D-glucosamine 1-phosphate
glycerone phosphate
(S)-2-aceto-2-hydroxybutanoate
(S)-2-acetolactate
5-enolpyruvoyl-shikimate 3-phosphate
(2S)-2-isopropylmalate
2-isopropylmaleate
(2R,3S)-3-isopropylmalate
(2S)-2-isopropyl-3-oxosuccinate
4-methyl-2-oxopentanoate
3-ethylmalate
2-oxovalerate
shikimate
3-dehydroshikimate
8-amino-7-oxononanoate
S-adenosyl-4-methylsulfanyl-2-oxobutanoate
7,8-diaminopelargonate
CO2
citrate
hydroxyatrazine
N-isopropylammelide
ethylamine
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-3-methyl-2-oxopentanoate
3-methyl-2-oxobutanoate
N-(5-phosphoribosyl)-anthranilate
anthranilate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
glutathione disulfide
H2O
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(3E)-2-oxopent-3-enoate
4-oxalocrotonate
1-piperideine-2-carboxylate
(2E)-2-hydroxypenta-2,4-dienoate
ammonia
enol-phenylpyruvate
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
1,2-dihydro-β-NADP
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
1-piperideine 6-carboxylate
5-aminopentanoate
4-oxoglutaramate
isopropylamine
protoanemonin
S-ribosyl-L-homocysteine
autoinducer 2
(S)-ureidoglycolate
(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate
3-hydroxy-4-methylbenzaldehyde
5-(hydroxymethyl)-2-methylphenol
1,4-dihydroxy-2-naphthoate
2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate
(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate
(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate
oxidized DCPIP
reduced DCPIP
3-(3-hydroxyphenyl)propanoate
(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate
vanillin
2-amino-3-carboxymuconate-6-semialdehyde
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
N-ethylammelide
dialurate
(R)-1-amino-2-propanol O-2-phosphate
3-oxo-3-phenylpropanoyl-CoA
(S)-1-phenylethanol
4-maleyl-acetoacetate
(R)-mevalonate
(R)-5-phosphomevalonate
2-hydroxy-4-carboxymuconate semialdehyde hemiacetal
2-pyrone-4,6-dicarboxylate
naphthalene-1,2-diol
3-oxo-5,6-didehydrosuberyl-CoA semialdehyde
3-oxo-5,6-didehydrosuberyl-CoA
2-oxepin-2(3H)-ylideneacetyl-CoA
selenodiglutathione
glutathioselenol
hydrogen selenide
4-imidazolone-5-propanoate
urocanate
urea-1-carboxylate
nicotine-1'-N-oxide
N,N-dimethylaniline
N,N-dimethylaniline-N-oxide
adenosine 5'-phosphoselenate
adenosine 5'-phosphosulfate
3'-phosphoadenylyl-sulfate
cyclohex-1,5-diene-1-carbonyl-CoA
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
2-dehydro-3-deoxy-D-gluconate
3-deoxy-D-glycero-2,5-hexodiulosonate
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
trans-O-hydroxybenzylidenepyruvate
4-carboxy-2-hydroxymuconate-6-semialdehyde
6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde
isochorismate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
prenyl diphosphate
(R)-mevalonate diphosphate
squalene
hop-22(29)-ene
4-fumaryl-acetoacetate
(R)-4'-phosphopantothenate
(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate
propanoyl phosphate
D-gluconate 6-phosphate
(S)-5-amino-3-oxohexanoate
N2-succinyl-L-glutamate 5-semialdehyde
N2-succinylglutamate
N2-succinyl-L-arginine
N2-succinyl-L-ornithine
5-amino-6-(D-ribitylamino)uracil
7-carboxy-7-deazaguanine
5,6-dimethylbenzimidazole
α-ribazole
α-ribazole 5'-phosphate
isopentenyl diphosphate
N-carbamoylputrescine
prephenate
deethylsimazine
N-ethylammeline
2-methyl-1,4-benzoquinone
methyl-1,4-benzoquinol
cis-3-phenylcyclohexa-3,5-diene-1,2-diol
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
5-(methylsulfanyl)-ribulose 1-phosphate
5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate
L-canavanine
histidinal
histidinol
D-glycero-β-D-manno-heptose 1,7-bisphosphate
D-glycero-β-D-manno-heptose 1-phosphate
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
methylamine
N-ethylglycine
2-iminoacetate
6-amino-2-oxohexanoate
(1R,2S)-1,2-dihydronaphthalene-1,2-diol
ethanolamine
3-hydroxypropanoate
3-oxopropanoate
orotidine 5'-phosphate
3-dehydroquinate
2-protocatechuoylphloroglucinolcarboxylate
homogentisate
(2-hydroxyphenyl)acetate
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
3-phosphooxypyruvate
N5-carboxyaminoimidazole ribonucleotide
salicyl alcohol
methylsalicylate
(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate
(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate
(2E,4Z)-2-hydroxymuconate
(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate
2-hydroxy-6-oxohepta-2,4-dienoate
lipid IVA
1,6-anhydro-N-acetyl-β-muramate
N-acetyl-D-muramate 6-phosphate
2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate
(2R,3S)-2,3-dihydroxy-2,3-dihydro-p-cumate
2,3-dihydroxy-p-cumate
(glutathion-S-yl)-4-hydroxy-2-nonenal
DNA with lesion
L-homocysteine
4-methylphenol
phenylacetate
ethylphosphate
hydrogen cyanide
adenosylcobalamin
cob(I)alamin
3,8-divinyl chlorophyllide a
3,8-divinyl protochlorophyllide a
chlorophyllide a
protochlorophyllide a
Mg-protoporphyrin
cob(II)yrinate c-monoamide
cob(II)yrinate a,c-diamide
cobyrinate
magnesium-protoporphyrin IX 13-monomethyl ester
131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester
131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester
adenosyl-cobinamide phosphate
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
3-deacetyl-3-(1-hydroxyethyl)bacteriochlorophyllide a
bacteriochlorophyllide a
adenosylcobyrate
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
protoheme
protoporphyrin IX
uroporphyrinogen-I
coproporphyrinogen I
uroporphyrinogen-III
protoporphyrinogen IX
siroheme
hydrogen sulfide
oxygen
2-iminopropanoate
2-iminosuccinate
2-iminobutanoate
2-chloroacetate
sn-glycerol 3-phosphate
3-phospho-D-glyceroyl-phosphate
3-phospho-D-glycerate
2-phospho-D-glycerate
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
(2R)-2,3-dihydroxy-3-methylbutanoate
(R)-citramalate
(R)-methylmalonate-semialdehyde
(S)-methylmalonate-semialdehyde
3-(all-trans-octaprenyl)benzene-1,2-diol
(S)-3-hydroxy-isobutanoate
2-octaprenylphenol
2-methoxy-6-(all-trans-octaprenyl)phenol
(indole-3-yl)acetonitrile
3-cyanopyridine
propionitrile
acrylonitrile
preQ0
n-butyronitrile
1-chloro-2,4-dinitrobenzene
2,4-dinitrophenyl-S-glutathione
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
3-chloro-cis,cis-muconate
4-chlorosalicylate
5-chlorosalicylate
4-chlorocatechol
Fe3+
K+
H+
ammonium
Fe2+
Mg2+
thiosulfate
sulfite
superoxide
hydrogencarbonate
sulfate
hydrogensulfite
OH-
selenite
selenate
phosphate
diphosphate
triphosphate
chloride
hydroxyl radical
(2E,6E)-farnesyl diphosphate
pristanate
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
1-oleoyl-2-palmitoyl-phosphatidylglycerol
glycine betaine
betaine aldehyde
2-aminoprop-2-enoate
(2Z)-2-aminobut-2-enoate
agmatine
putrescine
spermidine
S-(hydroxymethyl)glutathione
thiocyanate
methanethiol
glutathione
4-methyl-5-(2-phosphooxyethyl)thiazole
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
L-cysteate
3-sulfopyruvate
3-sulfocatechol
(R)-S-lactoylglutathione
3-sulfino-L-alanine
all-trans-retinyl palmitate
cis-dienelactone
trans-dienelactone
2-trans, 4-trans-undecadienoyl-CoA
(2E,4E)-tetradeca-2,4-dienoyl-CoA
(3E)-tetradec-3-enoyl-CoA
2-trans, 4-cis-undecadienoyl-CoA
(3E)-undec-3-enoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3Z,5E)-dodeca-3,5-dienoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
2-trans-nonenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
4-cis-undecenoyl-CoA
4-hydroxybenzoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
(3E)-dec-3-enoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
4-trans-undecenoyl-CoA
(+)-7-epi-jasmonoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
(3S)-hydroxyadipyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
3-hydroxyisovaleryl-CoA
(E)-2-methylcrotonoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
methylacrylyl-CoA
2-methylacetoacetyl-CoA
succinyl-CoA
malonyl-CoA
acetyl-CoA
α-linolenoyl-CoA
linoleoyl-CoA
(3R)-3-isopropenyl-6-oxoheptanoyl-CoA
(3S)-3-isopropenyl-6-oxoheptanoyl-CoA
2-methylbutanoyl-CoA
dihomo γ-linolenoyl-CoA
benzoyl-CoA
(R)-2-hydroxyglutaryl-CoA
(E)-glutaconyl-CoA
isovaleryl-CoA
phenylacetyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
(S)-3-aminobutanoyl-CoA
isobutanoyl-CoA
3'-dephospho-CoA
3-methylcrotonyl-CoA
3-methylglutaconyl-CoA
(R)-methylmalonyl-CoA
crotonyl-CoA
(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA
(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA
phytenoyl-CoA
trans-Δ2, cis-Δ4-decadienoyl-CoA
(2E)-dec-2-enoyl-CoA
(2E)-oct-2-enoyl-CoA
(2E)-dodec-2-enoyl-CoA
(S)-malyl-CoA
(3Z)-dodec-3-enoyl-CoA
oleoyl-CoA
ω-carboxy-(9Z)-octadec-9-enoyl-CoA
7-hydroxylauroyl-CoA
18-hydroxylinoleoyl-CoA
18-hydroxyoleoyl-CoA
16-hydroxypalmitoyl-CoA
18-hydroxystearoyl-CoA
(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA
(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
(3R)-3-hydroxypentanoyl-CoA
(3R)-3-hydroxyoctadecanoyl-CoA
(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA
(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxyhexadecanoyl-CoA
(S)-3-hydroxytetradecanoyl-CoA
(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(Z)-15-tetracosenoyl-CoA
(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA
(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA
butanoyl-CoA
propanoyl-CoA
hexanoyl-CoA
decanoyl-CoA
octanoyl-CoA
lauroyl-CoA
palmitoyl-CoA
stearoyl-CoA
cis-vaccenoyl-CoA
palmitoleoyl-CoA
myristoyl-CoA
pristanoyl-CoA
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA
(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA
hexadecanedioyl-CoA
3-oxoadipyl-CoA
3-oxododecanoyl-CoA
3-oxooctanoyl-CoA
3-oxohexanoyl-CoA
3-oxodecanoyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA
(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA
3-oxo-myristoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxooctadecanoyl-CoA
3-oxo-palmitoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
1-oleoyl-sn-glycerol
cholest-4-en-3-one
(25S)-3-oxocholest-4-en-26-oate
(25S)-3-oxocholest-4-en-26-oyl-CoA
3-oxo-4-pregnene-20-carboxyl-CoA
3,22-dioxochol-4-en-24-oyl-CoA
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
progesterone
cholest-5-en-3-one
17-α-hydroxyprogesterone
17-β-hydroxy-5-α-androstan-3-one
campest-4-en-3β-ol
androst-4-ene-3,17-dione
campesterol
(+)-7-epi-jasmonate
(indol-3-yl)acetate
methyl (indol-3-yl)acetate
nicotinamide
thiamine
nicotinate
riboflavin
all-trans-retinol
tetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
7,8-dihydrofolate monoglutamate
5,10-methylene-tetrahydromethanopterin
tetrahydromethanopterin
pyridoxamine 5'-phosphate
pyridoxine 5'-phosphate
pyridoxal 5'-phosphate
menadione
FMN
FAD
FADH2
FMNH2
(R)-NADHX
(S)-NADHX
NADH
NADPH
NAD+
NADP+
caldariellaquinone
caldariellaquinol
ubiquinol-8
ubiquinol-7
ubiquinol-10
ubiquinol-9
menaquinol-8
demethylmenaquinol-8
3-demethylubiquinol-8
3-demethylubiquinol-7
3-demethylubiquinol-10
3-demethylubiquinol-9
guanosine 2',3'-cyclic monophosphate
adenosine 2',3'-cyclic monophosphate
1-(5-phospho-β-D-ribosyl)-AMP
dAMP
8-oxo-dGTP
8-oxo-dGMP
2'-deoxyadenosine
2'-deoxyinosine
pppGpp
ppGpp
hypoxanthine
IDP
ITP
dIDP
dITP
5'-deoxyadenosine
adenosine 3'-monophosphate
guanosine 3'-monophosphate
GMP
XMP
1-(5-phospho-β-D-ribosyl)-ATP
dATP
dADP
dGTP
dGDP
IMP
adenylo-succinate
GTP
GDP
ADP
ATP
AMP
isoguanine
8-oxo-GTP
8-oxo-GMP
cyclic-AMP
2'-deoxyguanosine
dGMP
P1,P4-bis(5'-adenosyl) tetraphosphate
inosine
xanthosine
guanosine
adenosine
cytidine
uridine
cytidine 2',3'-cyclic monophosphate
uridine 2'3'-cyclic monophosphate
cyclic di-3',5'-guanylate
2-hydroxy-dATP
5-hydroxy-CTP
5-hydroxy-CMP
dTTP
dCTP
dUTP
CTP
UTP
dUMP
dTMP
dCMP
CMP
UMP
dTDP
dCDP
dUDP
CDP
UDP
β-nicotinamide D-ribonucleotide
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
cytidine-3'-monophosphate
uridine 3'-monophosphate
GDP-α-D-glucose
GDP-α-D-mannose
GDP-α-D-mannuronate
ADP-α-D-glucose
preQ1
uracil
adenine
guanine
CMP-3-deoxy-β-D-manno-octulosonate
UDP-α-D-glucose
dTDP-α-D-glucose
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine
UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine
UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine
UDP-α-D-glucuronate
UDP-α-D-galactose
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-α-D-galactofuranose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
dTDP-β-L-rhamnose
dTDP-4-dehydro-β-L-rhamnose
coenzyme A
(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin
(S)-1-pyrroline-5-carboxylate
precorrin-1
precorrin-2
sirohydrochlorin
7,8-dihydrolumazine
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydropterin
7,8-dihydromonapterin
7,8-dihydroneopterin
6-(hydroxymethyl)-7,8-dihydropterin
7,8-dihydroneopterin 3'-triphosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydroneopterin 3'-phosphate
2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate
7,8-dihydromonapterin triphosphate
7,8-dihydropteroate
(6R)-4a-hydroxy-tetrahydrobiopterin
5,6,7,8-tetrahydromonapterin
6-carboxy-5,6,7,8-tetrahydropterin
orotate
2-hydroxychromene-2-carboxylate
(+)-dihydrokaempferol
(+)-taxifolin
(+)-dihydromyricetin
kaempferol
quercetin
myricetin
benzene
4-hydroxyacetophenone
3-hexaprenyl-4-hydroxybenzoate
4-hydroxybenzoate
ethylbenzene
urate
cyanuric acid
salicylaldehyde
acetophenone
3-oxo-3-phenylpropanoate
biphenyl
toluene
naphthalene
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
atrazine
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
2,5-xylenol
3-hydroxy-5-methylbenzaldehyde
3-(hydroxymethyl)-5-methylphenol
3,5-xylenol
phenol
hydroquinone
catechol
4-methylcatechol
biphenyl-2,3-diol
2,3-dihydroxybenzoate
8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol
protocatechuate
3-methylcatechol
3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol
dimeric urushiol peroxide
menadiol
6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
2,3-dihydroxy-trans-cinnamate
3-hydroxy-trans-cinnamate
trans-cinnamate
salicylate
5-chloroprotocatechuate
vanillate
benzoate
4-aminobenzoate
3-hydroxy-4-methyl-benzoate
3-hydroxy-5-methyl-benzoate
acetylacetone
diacetyl
acetone
methylglyoxal
glycolaldehyde
acetaldehyde
formaldehyde
1-octanal
D-glyceraldehyde
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
α-D-glucopyranose
β-D-glucopyranose
β-D-galactopyranose
α-D-galactopyranose
ethanol
methanol
1-octanol
glycerol
myo-inositol
1D-myo-inositol 4-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 2-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 3-monophosphate
(1R,2R,4S)-limonene-1,2-diol
(1S,2S,4R)-limonene-1,2-diol
1-(β-D ribofuranosyl)nicotinamide
5-dehydro-4-deoxy-D-glucuronate
α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA
heptosyl-Kdo2-lipid A
(heptosyl)2-Kdo2-lipid A
α-Kdo-(2→6)-lipid IVA
maltotriose
maltotetraose
maltoheptaose
maltohexaose
maltopentaose
α,α-trehalose
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-β-D-glucosamine
4-deoxy-L-threo-hex-4-enopyranuronate
1-O-acetyl-α-maltose
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
a peptidoglycan dimer (E. faecium, tetrapeptide)
a peptidoglycan dimer (E. faeciums)
a peptidoglycan dimer (S. aureus)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide
a mature peptidoglycan(n) (meso-DAP containing)
a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)
a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide
a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
D-ribulose-1,5-bisphosphate
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
α,α-trehalose 6-phosphate
α-D-glucopyranose 1-phosphate
D-glyceraldehyde 3-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-erythrose 4-phosphate
D-sedoheptulose 7-phosphate
5-phospho-α-D-ribose 1-diphosphate
D-sedoheptulose 1,7-bisphosphate
4-phospho-D-erythronate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
α-D-glucose 6-phosphate
1-deoxy-D-xylulose 5-phosphate
D-xylulose 5-phosphate
aldehydo-D-arabinose 5-phosphate
D-arabinofuranose 5-phosphate
D-ribulose 5-phosphate
α-D-ribose-1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
D-gluconate
L-idonate
(3E,5Z)-tetradeca-3,5-dienoyl-CoA
18-hydroxyoleate
16-hydroxypalmitate
18-hydroxystearate
1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate
1-oleoyl-sn-glycerol 3-phosphate
1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate
1-myristoyl-sn-glycerol 3-phosphate
1-palmitoyl-sn-glycerol 3-phosphate
1-cis-vaccenoyl-sn-glycerol-3-phosphate
1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate
1,2-dimyristoyl-sn-glycerol 3-phosphate
1-palmitoyl-2-myristoyl phosphatidate
dioleoyl phosphatidate
1,2-dicis-vaccenoyl-phosphatidate
1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate
1-palmitoyl-2-cis-vaccenoyl phosphatidate
1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate
1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate
phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)
geranyl diphosphate
(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone
(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone
trans,octacis-decaprenyl phosphate
(+)-(1S,4R)-limonene-1,2- epoxide
(1S,4R)-1-hydroxymenth-8-en-2-one
(1R,4S)-1-hydroxymenth-8-en-2-one
3-oxo-24-ethyl-cholest-5-ene
3-oxo-24-ethyl-cholest-4-ene
phytyl diphosphate
di-trans,octa-cis-undecaprenyl phosphate
geranylgeranyl diphosphate
all-trans-nonaprenyl diphosphate
all-trans-hexaprenyl diphosphate
all-trans-decaprenyl diphosphate
all-trans-octaprenyl diphosphate
all-trans-heptaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
3-nonaprenyl-4-hydroxybenzoate
3-decaprenyl-4-hydroxybenzoate
3-octaprenyl-4-hydroxybenzoate
3-heptaprenyl-4-hydroxybenzoate
(S)-nicotine
3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine
3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine
allantoate
acetamide
(S)-(+)-allantoin
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-4-imidazolecarboxyamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
(3E)-2-oxohex-3-enedioate
chorismate
(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate
succinate
fumarate
L-aspartate
(S)-malate
α,ω-9Z-octadecenedioate
cis-2-methylaconitate
(3E,5R)-5-carboxy-2-oxohept-3-enedioate
(2R,3S)-2-methylisocitrate
(2S,3S)-2-methylcitrate
cis-aconitate
3-carboxy-cis,cis-muconate
2-hydroxy-4-oxobutane-1,2,4-tricarboxylate
(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate
(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate
D-threo-isocitrate
3-oxoadipate
(3R)-3-isopropenyl-6-oxoheptanoate
(3S)-3-isopropenyl-6-oxoheptanoate
3-phenyl-2-oxopropanoate
3-(4-hydroxyphenyl)pyruvate
pyruvate
glyoxylate
2-oxobutanoate
2-oxoglutarate
acetate
formate
propanoate
(R)-lactate
decanoate
octanoate
laurate
7-hydroxylaurate
gentisate
(15Z)-tetracosenoate
(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate
(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate
(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate
(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate
(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate
(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate
oleate
palmitate
stearate
α-linolenate
linoleate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
(3E,5Z)-tetradecadienoate
8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate
dinor-12-oxo-phytodienoate
di-homo-γ-linolenate
phytenate
(R)-pantoate
carbamate
L-α-amino-ε-keto-pimelate
L-serine
L-tyrosine
L-threonine
glycine
L-glutamine
L-cysteine
L-lysine
L-histidine
L-arginine
L-glutamate
L-valine
L-leucine
L-proline
L-isoleucine
L-alanine
L-phenylalanine
L-tryptophan
L-methionine
β-alanine
(S)-3-amino-2-methylpropanoate
D-glutamate
D-alanine
D-lysine
L-cystathionine
L,L-diaminopimelate
L-aspartyl-4-phosphate
L-ornithine
L-isoglutamine
N-carbamoyl-L-aspartate
formyl-L-isoglutamine
N-formyl-L-glutamate
N-formimino-L-glutamate
N-acetyl-L-ornithine
N-acetyl-L-citrulline
seleno-L-homocysteine
L-saccharopine
3-phospho-L-serine
sarcosine
N-acetyl-L-methionine
N-acetyl-L-glutamate
trans-4-hydroxy-L-proline
O-acetyl-L-homoserine
L-citrulline
L-canaline
L-aspartate 4-semialdehyde
L-homoserine
O-phospho-L-homoserine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
hypoglycin A
O-succinyl-L-homoserine
L-glutamate-5-semialdehyde
meso-diaminopimelate
hypoglycin B
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
L-cysteinylglycine
D-alanyl-D-alanine
γ-L-glutamyl-L-cysteine