ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C3355

(3E)-2-oxopent-3-enoate

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C1010

ammonia

C12274

enol-phenylpyruvate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C9431

1,2-dihydro-β-NADP

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C13702

1-piperideine 6-carboxylate

C4690

selenodiglutathione

C4688

glutathioselenol

C6574

(S)-ureidoglycolate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12494

N-acetyl-D-muramate 6-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C13543

mercuriphenyl acetate

C13854

hydrogen selenide

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C13986

pseudouridine

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C3629

vanillin

C3287

trans-O-hydroxybenzylidenepyruvate

C11863

naphthalene-1,2-diol

C2588

3-(2,3-dihydroxyphenyl)propanoate

C2541

3-(3-hydroxyphenyl)propanoate

C15200

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

C1531

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

C635

protoanemonin

C1407

3-hydroxypropanoate

C12224

4-(γ-L-glutamylamino)butanal

C13545

4-(γ-L-glutamylamino)butanoate

C1321

4-aminobutanoate

C13648

N-ethylammelide

C1036

α-ribazole 5'-phosphate

C12315

5,6-dimethylbenzimidazole

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C12844

3-hydroxy-4-methylbenzaldehyde

C12806

5-(hydroxymethyl)-2-methylphenol

C1268

(R)-4'-phosphopantothenate

C1078

(S)-2-amino-6-oxohexanoate

C15013

2-aminoacetaldehyde

C11865

N6'-acetylkanamycin-B

C13909

CDP-glycerol

C13672

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

C3322

(4Z)-2-oxohept-4-enedioate

C610

3-maleylpyruvate

C14913

4-methylgentisate

C14912

(2E)-3-methyl-4,6-dioxohept-2-enedioate

C520

3-methylgentisate

C14915

(2E)-2-methyl-4,6-dioxohept-2-enedioate

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C14075

N2-succinyl-L-arginine

C11868

N2-succinyl-L-ornithine

C11928

(2S)-4-acetamido-2-aminobutanoate

C12286

ectoine

C12586

α-D-ribose-1-methylphosphonate 5-phosphate

C12604

5-phospho-α-D-ribose 1,2-cyclic phosphate

C8191

5-dehydro-2-deoxy-D-gluconate 6-phosphate

C8210

5-dehydro-2-deoxy-D-gluconate

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C1186

5-oxo-L-proline

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C15056

salicyl alcohol

C2580

methylsalicylate

C352

2-iminoacetate

C14874

2-pyrone-4,6-dicarboxylate

C11760

prephenate

C13650

deethylsimazine

C13649

N-ethylammeline

C6099

lipid IVA

C12222

γ-glutamyl-L-putrescine

C11486

γ-butyrobetaine

C627

5-methylsalicylate

C15313

4-methylsalicylate

C2585

3-phenylpropanoate

C924

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

C266

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

C902

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

C3279

2-oxopent-4-enoate

C3269

(S)-4-hydroxy-2-oxopentanoate

C1305

4-fumaryl-acetoacetate

C933

L-canavanine

C12139

preuroporphyrinogen

C11483

glycolate

C3324

2-(4-hydroxyphenyl)-2-oxoacetate

C1297

4-hydroxybenzaldehyde

C3272

phenylglyoxylate

C571

4-hydroxy-2-nonenal

C14003

N-acetyl-L-glutamate 5-semialdehyde

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C11748

pseudouridine 5'-phosphate

C1353

3-phosphooxypyruvate

C932

canavaninosuccinate

C12056

L-arginino-succinate

C12390

D-erythro-imidazole-glycerol-phosphate

C1480

2-protocatechuoylphloroglucinolcarboxylate

C927

carbon monoxide

C1102

O-acetyl-L-serine

C1415

3-hydroxyanthranilate

C11895

N-Formyl-L-kynurenine

C11654

selenophosphate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C12848

N5-carboxyaminoimidazole ribonucleotide

C6614

O-ureido-L-homoserine

C11715

quinolinate

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C1538

2-C-methyl-D-erythritol 4-phosphate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C4674

glutathione disulfide

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C3888

7-carboxy-7-deazaguanine

C473

(2-hydroxyphenyl)acetate

C12192

carbonic acid

C8333

(indol-3-yl)pyruvate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11874

N-succinyl-2-amino-6-ketopimelate

C14181

2-maleylacetate

C12178

histidinal

C12176

histidinol

C3850

5-amino-6-(D-ribitylamino)uracil

C13627

DNA without lesion

C12369

3-dehydroquinate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C14754

3-hydroxy-5-oxohexanoate

C14495

3-hydroxy-5- oxohexanoyl-CoA

C2517

coniferaldehyde

C11802

4'-phosphopantetheine

C13544

2,4-dichlorophenoxyacetate

C11800

(R)-pantothenate

C7865

urea

C3656

D-gluconate 6-phosphate

C12214

(S)-4-amino-5-oxopentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C3295

2-keto-D-gluconate

C1454

2,5-didehydro-D-gluconate

C11639

succinate semialdehyde

C13913

N-carbamoylputrescine

C6349

3-oxopropanoate

C12171

homogentisate

C1283

4-maleyl-acetoacetate

C11652

shikimate 3-phosphate

C11539

xanthine

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1002

anthranilate

C873

coproporphyrinogen III

C2191

carbamoyl phosphate

C14924

carboxyphosphate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C11857

β-nicotinate D-ribonucleotide

C13635

β-D-ribosylnicotinate

C11832

orotidine 5'-phosphate

C5991

3-keto-β-D-galactose

C6361

acetoacetate

C12352

(S)-dihydroorotate

C9422

nicotinate adenine dinucleotide

C12364

isopentenyl diphosphate

C14074

prenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C4620

S-formylglutathione

C1231

5-aminolevulinate

C11767

porphobilinogen

C11930

N-acetylglutamyl-phosphate

C11653

shikimate

C1431

3-dehydroshikimate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C15238

5-deoxy-α-ribose 1-phosphate

C1196

S-methyl-5'-thioadenosine

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11826

oxalosuccinate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C6444

oxaloacetate

C891

citrate

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C11946

N-(5-phosphoribosyl)-anthranilate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C3319

4-methyl-2-oxopentanoate

C506

3-ethylmalate

C3259

2-oxovalerate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1108

acetyl phosphate

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C11479

phosphoenolpyruvate

C12048

γ-L-glutamyl 5-phosphate

C12162

hydrogen peroxide

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1024

aminoacetone

C12218

α-D-glucosamine 1-phosphate

C10349

glycerone phosphate

C928

CO2

C11543

H2O

C3262

3-methyl-2-oxobutanoate

C1528

2-dehydropantoate

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C6043

4-methylphenol

C12247

L-homocysteine

C11480

phenylacetate

C803

ethylphosphate

C3940

carboxyphosphinopyruvate

C4751

3-(hydroxyphosphinoyl)pyruvate

C3869

1-carboxyvinyl carboxyphosphonate

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9855

adenosyl-cobinamide phosphate

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C6624

protoheme

C7676

protoporphyrin IX

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7632

siroheme

C7111

Hg0

C7118

hydrogen sulfide

C7121

oxygen

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6644

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

C6601

(S)-ureidoglycine

C6755

(R)-citramalate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C13354

preQ0

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C11232

3-chloro-cis,cis-muconate

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C5768

3,5-dichlorocatechol

C5720

4-chlorosalicylate

C5719

5-chlorosalicylate

C5679

4-chlorocatechol

C5677

2,4-dichlorophenol

C7864

Fe3+

C4320

H+

C4328

ammonium

C11002

Hg2+

C11023

Fe2+

C11005

Zn2+

C11006

Co2+

C11011

Cu2+

C11001

Mo2+

C7034

hydrogensulfite

C7017

selenite

C7025

OH-

C8958

superoxide

C7016

sulfite

C7022

selenide

C7020

selenate

C7036

hydrogencarbonate

C7030

nitrate

C7057

molybdate

C7014

sulfate

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C8965

hydroxyl radical

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C11516

glycine betaine

C2169

betaine aldehyde

C2179

choline

C2183

betaine aldehyde hydrate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3592

N-acetylputrescine

C3574

spermidine

C3548

putrescine

C4606

S-(hydroxymethyl)glutathione

C3998

methanethiol

C4678

glutathione

C12581

taurine

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C12293

3-sulfino-L-alanine

C3727

all-trans-retinyl palmitate

C10102

cis-dienelactone

C10100

trans-dienelactone

C2598

D-glucono-1,5-lactone

C5313

2-methylbutanoyl-CoA

C5014

phenylacetyl-CoA

C5309

3-hydroxypropanoyl-CoA

C5296

acryloyl-CoA

C5188

dihomo γ-linolenoyl-CoA

C4920

isovaleryl-CoA

C5306

3-methylcrotonyl-CoA

C4899

3-methylglutaconyl-CoA

C4922

isobutanoyl-CoA

C4935

trans-feruloyl-CoA

C5257

salicyl-CoA

C5230

gentisyl-CoA

C5317

anthraniloyl-CoA

C4927

(E)-glutaconyl-CoA

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C5154

(3E)-tetradec-3-enoyl-CoA

C4901

succinyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5310

3-hydroxyisovaleryl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5314

2-methylacetoacetyl-CoA

C4937

3'-dephospho-CoA

C4913

malonyl-CoA

C5298

acetyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4301

(2E)-dodec-2-enoyl-CoA

C10623

phytanoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C480

18-hydroxystearoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C491

18-hydroxyoleoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C2744

(S)-3-hydroxyhexadecanoyl-CoA

C5499

(S)-3-hydroxytetradecanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C7176

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C1179

pentanoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C14662

hexanoyl-CoA

C14697

decanoyl-CoA

C5890

myristoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C5887

icosanoyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C2873

pristanoyl-CoA

C6558

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

C10758

3-oxoadipyl-CoA

C6201

3-oxododecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6198

3-oxodecanoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C5845

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

C5843

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C12545

ethene

C1235

methane

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C10982

nicotinate

C10988

riboflavin

C11515

L-carnitine

C10966

all-trans-retinol

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10053

FAD

C10050

FADH2

C10049

FMNH2

C10052

FMN

C5394

(R)-NADHX

C5392

(S)-NADHX

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C10048

caldariellaquinone

C1869

caldariellaquinol

C5543

ubiquinol-8

C1867

3-demethylubiquinol-8

C7841

adenosine 2',3'-cyclic monophosphate

C7645

guanosine 2',3'-cyclic monophosphate

C7649

isoguanine

C7647

8-oxo-dGTP

C7655

8-oxo-GTP

C7840

dGMP

C7743

dAMP

C7652

cyclic-AMP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7817

IDP

C7759

ITP

C7747

dIDP

C7749

dITP

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C7785

hypoxanthine

C7811

XMP

C7783

dATP

C7823

dADP

C7751

dGTP

C7807

dGDP

C7827

GMP

C5552

5'-deoxyadenosine

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10266

ppGpp

C10267

pppGpp

C7809

AMP

C7745

GTP

C7741

IMP

C10288

adenylo-succinate

C7795

GDP

C7653

guanosine 3'-monophosphate

C7641

adenosine 3'-monophosphate

C7844

ATP

C7757

ADP

C1804

P1,P4-bis(5'-adenosyl) tetraphosphate

C15091

inosine

C15094

xanthosine

C15088

adenosine

C15085

guanosine

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C2519

thymidine

C8747

uridine 2'3'-cyclic monophosphate

C8750

cytidine 2',3'-cyclic monophosphate

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C10280

5-hydroxy-CMP

C8764

dTTP

C8772

dCTP

C8724

dUTP

C8761

CTP

C8760

UTP

C8755

dCMP

C8770

dUMP

C8744

dTMP

C2245

CMP

C2241

UMP

C8720

dTDP

C8752

dUDP

C8733

dCDP

C8714

UDP

C8732

CDP

C4243

β-nicotinamide D-ribonucleotide

C6460

cytidine-3'-monophosphate

C6462

uridine 3'-monophosphate

C993

GDP-4-dehydro-6-deoxy-β-L-galactose

C983

GDP-α-D-mannuronate

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C10263

ADP-α-D-glucose

C9540

preQ1

C10601

thymine

C8739

uracil

C9455

guanine

C9454

adenine

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C7780

UDP-α-D-glucose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7722

UDP-α-D-glucuronate

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C8666

UDP-α-D-galactose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10614

coenzyme A

C5066

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

C4985

(S)-1-pyrroline-5-carboxylate

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C12742

7,8-dihydrolumazine

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12696

7,8-dihydromonapterin

C12686

7,8-dihydromonapterin triphosphate

C12714

7,8-dihydropterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C10609

7,8-dihydropteroate

C5594

5,6,7,8-tetrahydromonapterin

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C5582

(6R)-4a-hydroxy-tetrahydrobiopterin

C11481

orotate

C2631

2-hydroxychromene-2-carboxylate

C11661

(+)-taxifolin

C11659

(+)-dihydrokaempferol

C11655

(+)-dihydromyricetin

C9897

kaempferol

C4356

quercetin

C10567

myricetin

C7019

benzene

C3093

urate

C7060

3-hexaprenyl-4-hydroxybenzoate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C7084

naphthalene

C6829

salicylaldehyde

C6934

4-hydroxybenzoate

C3649

benzaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C12810

2,5-xylenol

C12802

3-hydroxy-5-methylbenzaldehyde

C12824

3-(hydroxymethyl)-5-methylphenol

C12790

3,5-xylenol

C12836

phenol

C11409

2,3-dihydroxybenzoate

C2770

4-methylcatechol

C11421

protocatechuate

C2768

catechol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C2461

3-hydroxy-trans-cinnamate

C2565

2,3-dihydroxy-trans-cinnamate

C2584

ferulate

C2521

trans-cinnamate

C11414

vanillate

C11429

salicylate

C8966

3-hydroxy-4-methyl-benzoate

C8971

3-hydroxy-5-methyl-benzoate

C8974

4-aminobenzoate

C2040

diacetyl

C6090

methylglyoxal

C3483

formaldehyde

C3500

acetaldehyde

C9494

D-glyceraldehyde

C2061

α-D-ribofuranose

C2109

α-D-galactopyranose

C2108

β-D-galactopyranose

C3448

methanol

C3450

ethanol

C3731

glycerol

C6561

D-mannitol

C10534

1D-chiro-inositol

C10535

scyllo-inositol

C10527

myo-inositol

C10519

1-keto-D-chiro-inositol

C10525

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

C10522

scyllo-inosose

C4086

1-(β-D ribofuranosyl)nicotinamide

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10226

α-Kdo-(2→6)-lipid IVA

C3694

XXXG xyloglucan oligosaccharide

C15302

6G-kestotriose

C6705

1,1-kestotetraose

C6703

1-kestotriose

C10688

maltotriose

C3687

XLXG xyloglucan oligosaccharide

C3685

XLLG xyloglucan oligosaccharide

C3689

XXLG xyloglucan oligosaccharide

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C6821

α-lactose

C2012

keto-D-fructose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C13570

N-acetyl-β-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C2143

D-xylulose

C8835

β-D-fructofuranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C11627

3'-ketolactose

C10377

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

C10375

a mature peptidoglycan(n) (meso-DAP containing)

C10360

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

C10366

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

C10368

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10358

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C358

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C355

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8811

α-D-glucopyranose 1-phosphate

C5615

D-glyceraldehyde 3-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8815

α-D-galactose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C6111

kanamycin B

C11485

D-gluconate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C538

18-hydroxyoleate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C8321

geranyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5368

all-trans-hexaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C15301

all-trans-nonaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4550

3-decaprenyl-4-hydroxybenzoate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C11313

6-aminopenicillanate

C1626

isopenicillin N

C1599

penicillin G

C4817

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C7685

allantoate

C9539

(S)-(+)-allantoin

C8033

5-amino-4-imidazolecarboxyamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8931

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

C3316

(3E)-2-oxohex-3-enedioate

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8923

α,ω-9Z-octadecenedioate

C3358

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

C8536

3-carboxy-cis,cis-muconate

C3359

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

C13457

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

C8534

cis-aconitate

C8544

cis-2-methylaconitate

C8542

(2S,3S)-2-methylcitrate

C13463

(2R,3S)-2-methylisocitrate

C8531

D-threo-isocitrate

C6371

3-oxoadipate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3308

pyruvate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3257

2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C11517

acetate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C6186

(S)-lactate

C3418

butanoate

C3419

pentanoate

C3412

decanoate

C3207

7-hydroxylaurate

C3415

laurate

C3409

octanoate

C3235

gentisate

C13266

(15Z)-tetracosenoate

C3391

myristate

C3381

arachidate

C13316

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C6379

linoleate

C10590

α-linolenate

C3387

stearate

C3383

palmitate

C13210

oleate

C6375

di-homo-γ-linolenate

C13260

phytenate

C11482

(R)-pantoate

C11503

5-deoxy-D-glucuronate

C3536

L-α-amino-ε-keto-pimelate

C3530

L-2-aminoadipate

C3526

L-kynurenine

C5032

carbamate

C5579

L-serine

C5573

L-tyrosine

C5577

L-threonine

C12067

glycine

C5609

L-glutamine

C5612

L-cysteine

C5584

L-lysine

C5605

L-histidine

C5642

L-arginine

C5607

L-glutamate

C5575

L-tryptophan

C5592

L-selenocysteine

C5571

L-valine

C5588

L-leucine

C5603

L-isoleucine

C2469

L-phenylalanine

C5581

L-proline

C5597

L-alanine

C5583

L-methionine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C8797

D-glutamate

C8796

D-proline

C8799

D-alanine

C5580

L,L-diaminopimelate

C5618

L-2,4-diaminobutanoate

C12073

L-aspartyl-4-phosphate

C12231

L-ornithine

C13322

N-carbamoyl-L-aspartate

C3621

N-acetyl-L-aspartate

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C12065

L-saccharopine

C12201

L-2-amino-3-oxobutanoate

C3402

3-phospho-L-serine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C10823

3-hydroxy-L-kynurenine

C11957

L-proline betaine

C11939

D-proline betaine

C11961

N-methyl-L-proline

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C12261

hypoglycin A

C12237

L-canaline

C12227

O-succinyl-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12203

S-adenosyl-L-homocysteine

C12229

O-phospho-L-homoserine

C12245

L-homoserine

C12239

L-aspartate 4-semialdehyde

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C2488

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

C11520

hypoglycin B

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine