an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

5-aminopentanoate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine-2-carboxylate

ammonia

2-keto-L-gulonate

isopropylamine

selenodiglutathione

glutathioselenol

hydrogen selenide

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

mercuriphenyl acetate

glutathione disulfide

H₂

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

autoinducer 2

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-amino-3-carboxymuconate-6-semialdehyde

dialurate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

creatinine

N-methylhydantoin

oxidized DCPIP

reduced DCPIP

2,5-dihydroxypyridine

N-formylmaleamate

5-methylsalicylate

4-methylsalicylate

dihydroxyacetone

phthalate

phthalate 4,5-cis-dihydrodiol

4,5-dihydroxyphthalate

2-pyrone-4,6-dicarboxylate

3-hydroxypropanoate

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

7-carboxy-7-deazaguanine

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

(R)-4-phosphopantoate

3-hydroxyanthranilate

N-Formyl-L-kynurenine

trans-O-hydroxybenzylidenepyruvate

2-iminoacetate

D-erythro-imidazole-glycerol-phosphate

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-methyl-3-oxoadipate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

(S)-2,3,4,5-tetrahydrodipicolinate

thiamine diphosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

N-ethylmaleimide

N-ethylsuccinimide

4-chlorobenzoate

5-(methylsulfanyl)-α-D-ribose

2-dehydro-3-deoxy-D-gluconate

(S)-2-amino-6-oxohexanoate

4-amino-4-deoxychorismate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

muconolactone

(+)-muconolactone

cis,cis-muconate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

3-mercaptopyruvate

dethiobiotin

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

presqualene diphosphate

selenophosphate

butyramide

methylsalicylate

salicyl alcohol

(S)-mandelate

(R)-mandelate

6-amino-2-oxohexanoate

6-chlorohydroxyquinol

3-phosphooxypyruvate

4-pyridoxolactone

squalene

hop-22(29)-ene

4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate

2-aminoacetaldehyde

(4,5-dihydro-5-oxofuran-2-yl)-acetate

ethanolamine

N²-succinylglutamate

citraconate

(2R,3S)-3-methylmalate

histidinal

histidinol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

urea-1-carboxylate

S-formylglutathione

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

N⁵-carboxyaminoimidazole ribonucleotide

5-oxo-L-proline

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

2-dehydro-3-deoxy-D-galactonate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetyl-D-muramate 6-phosphate

β-D-ribosylnicotinate

3-deoxy-α-D-manno-2-octulosonate

4'-phosphopantetheine

5-carboxymethyl-2-hydroxymuconate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

(lipoyl)adenylate

4-fumaryl-acetoacetate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

α-ribazole

3-phosphonopyruvate

xanthine

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

6-phospho D-glucono-1,5-lactone

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

(2-hydroxyphenyl)acetate

2-oxoadipate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(S)-5-amino-3-oxohexanoate

3-dehydroquinate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

L-gulono-1,4-lactone

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

4-hydroxy-2-nonenal

β-D-fructose 2,6-bisphosphate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

lipid X

O-acetyl-L-serine

carbonic acid

3-deoxy-D-manno-octulosonate 8-phosphate

S-ribosyl-L-homocysteine

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

propanoyl phosphate

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

shikimate 3-phosphate

2-phosphoglycolate

DNA without lesion

2-maleylacetate

N-(5-phosphoribosyl)-anthranilate

anthranilate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

hydroxyatrazine

N-isopropylammelide

ethylamine

(S)-ureidoglycolate

2-C-methyl-D-erythritol 4-phosphate

4-imidazolone-5-propanoate

urocanate

citrate

oxaloacetate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

isopentenyl diphosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

hydrogen peroxide

β-nicotinate D-ribonucleotide

quinolinate

homogentisate

4-maleyl-acetoacetate

lipid A disaccharide (E. coli)

lipid IV_A

porphobilinogen

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

oxalate

4-aminobutanoate

3-oxopropanoate

tartronate semialdehyde

acetoacetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

5-enolpyruvoyl-shikimate 3-phosphate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

orotidine 5'-phosphate

γ-L-glutamyl 5-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

acetyl phosphate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

L-selenocystathionine

2-keto-D-gluconate

2,5-didehydro-D-gluconate

glycolate

O-ureido-L-homoserine

hydroxypyruvate

formamide

3-ureidopropanoate

aminoacetone

oxalosuccinate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

N-acetylglutamyl-phosphate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

glycerone phosphate

4-methyl-2-oxopentanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-dehydropantoate

imidazole acetol-phosphate

L-histidinol phosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

N-acetyl-L-glutamate 5-semialdehyde

(R)-1-amino-2-propanol O-2-phosphate

canavaninosuccinate

L-canavanine

L-arginino-succinate

preuroporphyrinogen

prephenate

acrylamide

acrylate

propionamide

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

1-deoxy-L-glycero-tetrulose 4-phosphate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

shikimate

3-dehydroshikimate

coproporphyrinogen III

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-methylcytosine

succinate semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

(S)-3-methyl-2-oxopentanoate

5-dehydro-D-gluconate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

phosphoenolpyruvate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

α-D-glucosamine 1-phosphate

carboxyphosphate

nicotinate adenine dinucleotide

urea

CO₂

H₂O

(S)-dihydroorotate

carbamoyl phosphate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

phosphonoacetaldehyde

1-carboxyvinyl carboxyphosphonate

(2-aminoethyl)phosphonate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cob(I)inamide

Mg-protoporphyrin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

cob(II)yrinate c-monoamide

cobyrinate

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

protoheme

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

Hg⁰

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

ethene

3-chloro-cis,cis-muconate

2-chloromaleylacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,4,6-trichlorophenol

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

NADH

NADPH

NAD⁺

NADP⁺

glycine betaine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

Fe³⁺

ammonium

K⁺

H⁺

Hg²⁺

Fe²⁺

Mg²⁺

sulfate

hydrogensulfite

selenite

OH^-

selenide

selenate

sulfite

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

thiocyanate

methanethiol

glutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

isethionate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

cadaverine

putrescine

spermidine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

cyanuric acid

urate

benzene

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

atrazine

2,6-dichlorohydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

quercetin

2,3-dihydroxybenzoate

4-methylcatechol

catechol

protocatechuate

salicylate

5-chloroprotocatechuate

4-aminobenzoate

preQ₀

3-cyanopyridine

acrylonitrile

propionitrile

(indole-3-yl)acetonitrile

n-butyronitrile

(R)-lipoate

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

7,8-dihydromethanopterin

5,10-methenyltetrahydromethanopterin

5-formyl-tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

nicotinamide

riboflavin

nicotinate

4-pyridoxate

pyridoxine

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxal

pyridoxine 5'-phosphate

all-trans-retinol

menadione

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

D-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

all-trans-retinyl palmitate

2-methylbutanoyl-CoA

isobutanoyl-CoA

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-chlorobenzoyl-coA

4-hydroxybenzoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(2R,3S)-β-methylmalyl-CoA

phenylacetyl-CoA

(S)-3-aminobutanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

formyl-CoA

oxalyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3'-dephospho-CoA

malonyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxododecanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

allantoate

acetamide

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

L-aspartate

(S)-malate

α,ω-9Z-octadecenedioate

D-glucarate

D-galactarate

3-(carbamoylamino)-2-methylpropanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

cis-aconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

pyruvate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

laurate

decanoate

7-hydroxylaurate

octanoate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

18-hydroxyoleate

18-hydroxystearate

16-hydroxypalmitate

(15Z)-tetracosenoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

oleate

α-linolenate

linoleate

stearate

palmitate

phytenate

5-deoxy-D-glucuronate

D-mannonate

(R)-pantoate

orotate

D-gluconate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-erythro-hex-4-enopyranuronate

L-α-amino-ε-keto-pimelate

L-kynurenine

L-2-aminoadipate

carbamate

L-serine

N-carbamoylsarcosine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-alanine

L-proline

L-leucine

glycine

L-glutamine

D-glutamate

L-glutamate

L-lysine

L-histidine

L-arginine

L-phenylalanine

L-tyrosine

L-tryptophan

cis-4-hydroxy-D-proline

D-lysine

D-alanine

L-saccharopine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N-carbamoyl-L-aspartate

N-carbamoylglycine

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

L-proline betaine

D-proline betaine

N-methyl-L-proline

O-acetyl-L-homoserine

L-methionine

L-cysteine

L-isoglutamine

L,L-diaminopimelate

L-cystathionine

L-isoleucine

L-valine

L-asparagine

L-threonine

L-ornithine

L-citrulline

hypoglycin A

L-canaline

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

1-aminocyclopropane-1-carboxylate

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

(3R)-3-isopropenyl-6-oxoheptanoate

(3S)-3-isopropenyl-6-oxoheptanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

glyoxylate

2-oxobutanoate

hypoglycin B

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

hydroxyquinol

glycerol

D-arabinitol

D-sorbitol

L-iditol

ethanol

methanol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

geranyl diphosphate

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

trans,octacis-decaprenyl phosphate

(+)-(1S,4R)-limonene-1,2- epoxide

(1S,4R)-1-hydroxymenth-8-en-2-one

(1R,4S)-1-hydroxymenth-8-en-2-one

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

α,α-trehalose

β-D-fructofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

β-L-fucopyranose

α-L-fucopyranose

keto-L-sorbose

keto-D-fructose

D-xylulose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-ribopyranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

D-glyceraldehyde

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

ADP-α-D-glucose

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

keto-L-tagatose 6-phosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-idonate

D-galactonate

L-gulonate

diacetyl

methylglyoxal

3-(N-morpholino)propanal

formaldehyde

acetaldehyde

butan-1-al

precorrin-5

precorrin-7

precorrin-8x

precorrin-3B

precorrin-4

precorrin-6B

precorrin-6A

precorrin-3A

precorrin-1

precorrin-2

hydantoin

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dCMP

dCTP

dTTP

dUTP

dUDP

UDP

dCDP

CDP

dTDP

5,6-dihydrothymine

5,6-dihydrouracil

cytidine-3'-monophosphate

uridine 3'-monophosphate

cytosine

uracil

UTP

CTP

dUMP

dTMP

5-fluorouracil

CMP

UMP

cytidine

uridine

thymine

guanine

hypoxanthine

adenine

isoguanine

preQ₁

xanthosine

guanosine

inosine

adenosine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

ITP

ATP

GTP

IDP

GDP

ADP

XMP

GMP

IMP

AMP

dITP

dGTP

dATP

dIDP

dADP

dGDP

dGMP

dAMP

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropterin

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

2-hydroxychromene-2-carboxylate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

8-oxo-GTP

8-oxo-GMP

1-(5-phospho-β-D-ribosyl)-AMP

pppGpp

8-oxo-dGTP

8-oxo-dGMP

cyclic-AMP

ppGpp

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

5'-deoxyadenosine

5-fluorocytosine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA