an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

carbamoyl phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

3-deoxy-D-glycero-2,5-hexodiulosonate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

(S)-dihydroorotate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

prephytoene diphosphate

2-maleylacetate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

L-β-lysine

dimethylamine

(S)-2-amino-6-oxohexanoate

benzoylsuccinyl-CoA

H₂O

1-phosphatidyl-myo-inositol 2-mannose

1-phosphatidyl-myo-inositol

streptomycin 3''-phosphate

chlorite

5-carboxymethyl-2-hydroxymuconate

CO₂

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

4-imidazoleacetate

imidazole acetaldehyde

ethanolamine

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

β-D-ribosylnicotinate

3-methoxy-4-hydroxyphenylglycolaldehyde

2-dehydro-3-deoxy-D-gluconate

hydrogenobyrinate a,c-diamide

5-dehydro-4-deoxy-D-glucarate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

anthranilate

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

urea-1-carboxylate

urea

urocanate

lanthionine

N-(5-phosphoribosyl)-anthranilate

4-imidazolone-5-propanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

glutathionylspermidine

2-C-methyl-D-erythritol 4-phosphate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

orotidine 5'-phosphate

3-α(S)-strictosidine

tryptamine

secologanin

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

2,5-diaminohexanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

histidinol

histidinal

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

glycerone phosphate

dihydroxyacetone

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

isopentenyl diphosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

4-methyl-2-oxopentanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

hydrogen peroxide

arsenite

nigerose

1,4-dihydroxy-2-naphthoate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

succinate semialdehyde

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

α-D-galactosyl-diphosphoundecaprenol

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

(R)-pantothenate

quinolinate

β-nicotinate D-ribonucleotide

1,6-anhydro-N-acetyl-β-muramate

DNA without lesion

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

coproporphyrinogen III

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

2-iminoacetate

citrate

oxaloacetate

ethylamine

N-ethylglycine

nicotinate adenine dinucleotide

α-D-glucosamine 1-phosphate

methylamine

2-dehydropantoate

homogentisate

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

carbonic acid

L-arginino-succinate

prenyl diphosphate

canavaninosuccinate

O-ureido-L-homoserine

dethiobiotin

7,8-diaminopelargonate

(2S)-2-isopropylmalate

(1R,2R)-1,2-diphenylethane-1,2-diol

cis-stilbene oxide

streptomycin 6-phosphate

γ-L-glutamyl 5-phosphate

α-ribazole

prephenate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

(E)-3-(methoxycarbonyl)pent-2-enedioate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

phosphoenolpyruvate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

S-formylmycothiol

S-(hydroxymethyl)mycothiol

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

4-amino-4-deoxychorismate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

3-keto-β-D-galactose

itaconate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

N-succinyl-L,L-2,6-diaminopimelate

scopolin

acetoacetate

4-fumaryl-acetoacetate

cis-coumarinic acid-β-D-glucoside

N-Formyl-L-kynurenine

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

O-acetyl-L-serine

hydrogen selenide

4-pyridoxolactone

oxalosuccinate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(2Z,4E)-2-aminomuconate

4-maleyl-acetoacetate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

ε-caprolactone

cyclohexanone

(S)-4-hydroxy-2-oxopentanoate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

3-ureidopropanoate

5-amino-6-(D-ribitylamino)uracil

L-gulono-1,4-lactone

L-canavanine

3-oxopropanoate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

xanthine

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

acetyl phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

1-deoxy-L-glycero-tetrulose 4-phosphate

2-oleoylglycerol

4-hydroxy-2-nonenal

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

(L-threonylcarbamoyl)adenylate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

3-phosphooxypyruvate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

hydrogenobyrinate

thiamine phosphate

4'-phosphopantetheine

mercuriphenyl acetate

2-isopropylmaleate

tartronate semialdehyde

hydroxypyruvate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

oxalate

formamide

L-histidinol phosphate

shikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroshikimate

1,4-dihydroxy-2-naphthoyl-CoA

aminoacetone

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

salicyl alcohol

methylsalicylate

FK-506

31-O-desmethylFK-506

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxytryptophol

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

H₂

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

4-aminobutanoate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

carbon monoxide

glycolate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

dehydroprephenate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

L-3-cyclohex-2'-enylalanine

chlorate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-oxoglutaramate

O-1,4-α-L-dihydrostreptosyl-streptidine 6-phosphate

dihydrostreptomycin 6-phosphate

dTDP-L-dihydrostreptose

CDP-N-methyl-L-glucosamine

streptidine 6-phosphate

N¹-amidinostreptamine 6-phosphate

4-amino-2-methyl-5-pyrimidinemethanol

glutathione disulfide

N-acetyl-D-muramate 6-phosphate

autoinducer 2

S-ribosyl-L-homocysteine

L-xylo-hex-3-ulono-1,4-lactone

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

glutathioselenol

selenodiglutathione

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

5-oxo-L-proline

ammonia

α-D-galacturonate 1-phosphate

1-piperideine 6-carboxylate

4-oxoglutaramate

4-oxalocrotonate

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

trimethyl sulfonium

tungstate

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

perchlorate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Mo²⁺

Mg²⁺

Hg²⁺

Co²⁺

Fe²⁺

Na⁺

K⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

3-sulfino-L-alanine

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

mycothiol

S-sulfanylglutathione

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

N-acetyl-β-neuraminate 9-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

Reactive Blue 5

α-glucose 1,6-bisphosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrinogen IX

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

hydrogen cyanide

cob(I)alamin

adenosylcobalamin

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobyrate

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

cobyrinate

cob(II)yrinate c-monoamide

adenosyl-cobinamide phosphate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

ethylphosphate

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

cyanophycin primer

cyanophycin primer-L-aspartate

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

L-homocysteine

4-methylphenol

hypoglycin B

L-2-aminoadipate

L-kynurenine

L-cysteine

glycine

L-glutamine

L-serine

L-threonine

L-asparagine

L-tyrosine

L-glutamate

L-aspartate

L-lysine

L-histidine

L-arginine

D-glutamate

L-proline

L-alanine

L-leucine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-serine

L-valine

L-tryptophan

L-selenocysteine

L-phenylalanine

L-isoleucine

L-methionine

L-cystathionine

L-aspartyl-4-phosphate

L-ornithine

L,L-diaminopimelate

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-formyl-L-methionine

N⁶,N⁶-dimethyl-L-arginine

L-citrulline

L-cystine

L-homoserine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-succinyl-L-homoserine

hypoglycin A

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-canaline

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-4-hydroxyglutamate semialdehyde

D-ornithine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-saccharopine

S-sulfanyl-L-cysteine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N⁶-hydroxy-L-lysine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

(2S, 3S)-3-methylaspartate

D-alanine

D-lysine

D-proline

D-aspartate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

ADP

ATP

AMP

dATP

dGTP

1-(5-phospho-β-D-ribosyl)-AMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

GDP

adenylo-succinate

IMP

GTP

GMP

hypoxanthine

2'-deoxyinosine

2'-deoxyadenosine

XMP

5'-deoxyadenosine

ITP

IDP

dITP

dIDP

1-(5-phospho-β-D-ribosyl)-ATP

dIMP

XTP

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyguanosine

dADP

dGDP

ppGpp

pppGpp

cyclic-GMP

cyclic-AMP

dGMP

dAMP

5'-deoxy-5'-fluoroadenosine

NAD⁺

NADP⁺

NADH

NADPH

5,6-dihydrothymine

5,6-dihydrouracil

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-viosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

guanine

adenine

uracil

cytosine

thymine

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

uridine 3'-monophosphate

cytidine-3'-monophosphate

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dCMP

dTMP

dUMP

dTDP

dCDP

dUDP

dUTP

dCTP

dTTP

CDP

UDP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

2'-deoxyuridine

thymidine

2'-deoxycytidine

xanthosine

guanosine

inosine

adenosine

uridine

cytidine

D-mannonate

D-altronate

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

sucrose

α-lactose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

streptomycin

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

glycerol

D-mannitol

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

keto-D-fructose

glycolaldehyde

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

5-chloro-5-deoxy-D-ribono-γ-lactone

5-chloro-5-deoxy-D-ribose

L-ribulose

D-xylulose

keto-L-rhamnulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

aldehydo-D-galacturonate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

(S)-DNPA

5-deoxy-dihydrokalafungin

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

phytyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

all-trans phytofluene

apo-4'-lycopenoate

dihydrokalafungin

actinorhodin

actinorhodin intermediate

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

(5Z)-tetradecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

1,2-dibutyrin

tributyrin

di-trans,octa-cis-undecaprenyl phosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-sn-glycerol 3-phosphate

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-amino-1-deoxy-scyllo-inositol

1-guanidino-1-deoxy-scyllo-inositol

D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol

D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol

1-keto-D-chiro-inositol

1-amino-1-deoxy-scyllo-inositol 4-phosphate

1-guanidino-1-deoxy-scyllo-inositol 4-phosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

protocatechuate

(2E,6E)-farnesal

3-(N-morpholino)propanal

fluoroacetaldehyde

phytenal

(S)-lactaldehyde

formaldehyde

1-octanal

acetaldehyde

butan-1-al

isobutanal

1-propanal

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

menadione

diacetyl

a coenzyme-A group

leukotriene-E4

leukotriene-D4

stearate

myristate

laurate

decanoate

arachidate

butanoate

octanoate

palmitate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

oleate

γ-linolenate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(2E,6E)-farnesoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

trans-cinnamate

salicylate

4-aminobenzoate

benzoate

acetate

5-deoxy-D-glucuronate

orotate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

fluoroacetate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(R)-3-hydroxybutanoate

cis-aconitate

trans-aconitate

(2R)-homocitrate

3-carboxy-cis,cis-muconate

cis-homoaconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

(3E)-2-oxohex-3-enedioate

chorismate

D-galactarate

D-glucarate

fumarate

succinate

(S)-malate

(4S)-4-hydroxy-2-oxoglutarate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

benzene

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

urate

coumarinate

menadiol

3-demethylubiquinol-8

demethylmenaquinol-8

demethylmenaquinol-7

menaquinol-8

menaquinol-7

ubiquinol-8

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

(indole-3-yl)acetonitrile

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FMN

riboflavin

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

sirohydrochlorin

precorrin-2

precorrin-1

precorrin-6B

precorrin-8x

precorrin-7

precorrin-5

precorrin-4

precorrin-6A

precorrin-3B

precorrin-3A

salinosporamide A

nicotinate

thiamine

nicotinamide

L-ascorbate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal

pyridoxine

pyridoxamine

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

dihomo γ-linolenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

choloyl-CoA

chenodeoxycholoyl-CoA

phenylacetyl-CoA

(2S)-methylsuccinyl-CoA

acetyl-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

acryloyl-CoA

β-alanyl-CoA

malonyl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

itaconyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

2-methylacetoacetyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

3'-dephospho-CoA

oxalyl-CoA

formyl-CoA

isobutanoyl-CoA

4-chloro-3-hydroxybutyryl-CoA

4-chloro-crotonyl-CoA

chloroethylmalonyl-CoA

(S)-3-aminobutanoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isovaleryl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

palmitoyl-CoA

myristoyl-CoA

icosanoyl-CoA

stearoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

lauroyl-CoA

decanoyl-CoA

octanoyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(E)-cinnamoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-hex-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholest-4-en-3-one

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-hydroxycholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

cholest-5-en-3-one

cholesterol

cholate

chenodeoxycholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

acetamide

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

betaine aldehyde

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

spermine

putrescine

monodehydroascorbate radical