an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

urea

2-amino-3-carboxymuconate-6-semialdehyde

1-piperideine 6-carboxylate

ammonia

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

O-acetyl-L-serine

hydrogen selenide

citrate

oxaloacetate

CO₂

lipoamide

dihydrolipoamide

itaconate

carbamoyl phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(R)-2,3-dihydroxy-3-methylpentanoate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

2-dehydropantoate

3-methyl-2-oxobutanoate

(R)-pantothenate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

hydrogen peroxide

coproporphyrinogen III

preuroporphyrinogen

L-canavanine

canavaninosuccinate

L-arginino-succinate

glycolate

2-phosphoglycolate

α-D-glucosamine 1-phosphate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

3-amino-1-hydroxyacetone 1-phosphate

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

lipid IV_A

lipid A disaccharide (E. coli)

3-deoxy-α-D-manno-2-octulosonate

orotidine 5'-phosphate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

2-oleoylglycerol

anthranilate

dethiobiotin

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

(S)-2-amino-6-oxohexanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

4-hydroxy-2-nonenal

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

salicyl alcohol

methylsalicylate

phosphoenolpyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

D-gluconate 6-phosphate

isopentenyl diphosphate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

4-amino-4-deoxychorismate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

autoinducer 2

S-ribosyl-L-homocysteine

4-pyridoxolactone

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

3-dehydroshikimate

shikimate

quinolinate

glycerone phosphate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

4-acetamidobutanoate

4-acetamidobutanal

S-formylglutathione

3-deoxy-D-manno-octulosonate 8-phosphate

4-aminobutanoate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

N-acetylglutamyl-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-3-methyl-2-oxopentanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(S)-dihydroorotate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

DNA without lesion

5-amino-6-(D-ribitylamino)uracil

N-acetyl-L-glutamate 5-semialdehyde

presqualene diphosphate

squalene

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

(4-hydroxyphenyl)acetate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

porphobilinogen

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

malonate

succinate semialdehyde

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

prephenate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

lipid X

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

H₂

N-(5-phosphoribosyl)-anthranilate

γ-L-glutamyl 5-phosphate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

acetyl phosphate

5-(methylsulfanyl)-α-D-ribose

histidinol

histidinal

thiamine phosphate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

pyrazine-2-carboxylate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2S,5S)-5-carboxymethyl proline

O-ureido-L-homoserine

thiamine diphosphate

L-selenocystathionine

β-nicotinate D-ribonucleotide

(L-threonylcarbamoyl)adenylate

N-succinyl-L,L-2,6-diaminopimelate

glutathione disulfide

N-succinyl-2-amino-6-ketopimelate

carbonic acid

nicotinate adenine dinucleotide

arsenite

(2S)-2-isopropylmalate

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

oxalosuccinate

2-isopropylmaleate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

(S)-2,3,4,5-tetrahydrodipicolinate

3'-phosphoadenylyl-sulfate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

hydroxypyruvate

2-(α-hydroxyethyl)thiamine diphosphate

N⁵-carboxyaminoimidazole ribonucleotide

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

1,4-dihydroxy-2-naphthoate

4-amino-2-methyl-5-pyrimidinemethanol

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

core oligosaccharide-lipid A (E. coli K-12 core type)

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

(4S)-4-hydroxy-2-oxoheptanedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

adipate

6-oxohexanoate

6-aminohexanoate

glutathioselenol

selenodiglutathione

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

5-oxo-L-proline

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(2E,6E)-farnesyl diphosphate

pristanate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

ammonium

K⁺

H⁺

Fe²⁺

thiamine

riboflavin

nicotinate

nicotinamide

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

7,8-dihydrofolate monoglutamate

all-trans-retinol

pyridoxine 5'-phosphate

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxamine

4-pyridoxate

FADH₂

FAD

FMN

FMNH₂

NADH

NADPH

NAD⁺

NADP⁺

3-demethylubiquinol-9

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-9

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

Reactive Blue 5

(R)-NADHX

(S)-NADHX

glycine betaine

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

preQ₀

hydrogen cyanide

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

L-homocysteine

4-methylphenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

nitric oxide

hydroxyl radical

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

dTDP-4-amino-4,6-dideoxy-α-D-galactose

1-oleoyl-2-lyso-glycerone phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

protoporphyrinogen IX

(Z,Z)-biliverdin-IX α

hemin

siroheme

protoheme

nitrous oxide

N₂

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

hypoglycin B

L-α-amino-ε-keto-pimelate

D-methionine

D-aspartate

D-alanine

D-glutamate

L-histidine

L-phenylalanine

L-tyrosine

L-tryptophan

L-cysteine

L-serine

L-glutamine

L-asparagine

glycine

L-threonine

L-arginine

L-lysine

L-aspartate

L-glutamate

L-proline

L-alanine

L-leucine

β-alanine

(S)-3-amino-2-methylpropanoate

L-citrulline

L-isoleucine

L-valine

L-methionine

L-4-hydroxyglutamate semialdehyde

L-cystine

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homoserine

L-ornithine

L-glutamate-5-semialdehyde

hypoglycin A

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-canaline

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L,L-diaminopimelate

L-cystathionine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

L-selenomethionine

seleno-L-homocysteine

sarcosine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-phospho-L-serine

N-α-acetyl lysine methyl ester

O-acetyl-L-homoserine

isoguanine

8-oxo-dGTP

8-oxo-GTP

5'-deoxyadenosine

ADP

ATP

GDP

GTP

dGMP

2'-deoxyguanosine

dAMP

2'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

GMP

hypoxanthine

IMP

dATP

adenylo-succinate

ITP

dIMP

dITP

XMP

XTP

dADP

dGDP

ppGpp

pppGpp

2'-deoxyinosine

dIDP

IDP

dGTP

cyclic-AMP

AMP

UDP-α-D-glucose

GDP-α-D-glucose

ADP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

GDP-α-D-mannose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP-3-deoxy-β-D-manno-octulosonate

inosine

adenosine

guanosine

thymidine

2'-deoxycytidine

2'-deoxyuridine

preQ₁

guanine

adenine

uracil

5-hydroxy-CTP

2-hydroxy-dATP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

dTMP

dCMP

dUMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CMP

UMP

CDP

UDP

UTP

CTP

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

sirohydrochlorin

precorrin-1

precorrin-2

orotate

(S)-1-pyrroline-5-carboxylate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

toluene

4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

salicylaldehyde

2,5-dichloro-p-quinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

protocatechuate

2,3-dihydroxybenzoate

4-aminobenzoate

benzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

benzaldehyde

3,4-dihydroxyphenylacetate

enterobactin

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

heptosyl-Kdo₂-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

apo-4'-lycopenal

apo-4'-lycopenoate

all-trans-retinyl palmitate

(3S)-2,3-epoxy-2,3-dihydrosqualene

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-palmitoyl-2-linoleoyl-phosphatidylcholine

ferrichrome

acetyl-CoA

succinyl-CoA

itaconyl-CoA

malonyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

4-hydroxybenzoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-hydroxyisovaleryl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

phytenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

octanoyl-CoA

decanoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

D-glucono-1,5-lactone

D-gluconate

maltotriose

maltotetraose

maltohexaose

maltoheptaose

maltopentaose

sucrose

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

sucrose 6^F-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

2,5-dichloro-p-quinone

methylglyoxal

(R)-acetoin

diacetyl

(S)-lactaldehyde

acetaldehyde

1-octanal

formaldehyde

butan-1-al

phytenal

palmitate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

(3E,5Z)-tetradecadienoate

(15Z)-tetracosenoate

phytenate

octanoate

decanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

acetate

formate

(S)-lactate

(R)-lactate

(2R,3S)-2-methylisocitrate

chorismate

fumarate

succinate

(S)-malate

(4S)-4-hydroxy-2-oxoglutarate

cis-aconitate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

6-caprolactam

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

pyrazinamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

cholate

glycocholate

isocholate

3-dehydrocholate

(R,R)-2,3-butanediol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 4-monophosphate

ethanol

butan-1-ol

phytol

methanol

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

thiocyanate

methanethiol

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole