an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4S)-4-hydroxy-2-oxoheptanedioate

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

N⁵-carboxyaminoimidazole ribonucleotide

pyruvic oxime

histidinol

histidinal

lipid X

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

core oligosaccharide-lipid A (E. coli K-12 core type)

2-iminoacetate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

4-maleyl-acetoacetate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

4-pyridoxolactone

N-succinyl-2-amino-6-ketopimelate

2-oleoylglycerol

3-dehydroshikimate

5-(methylsulfanyl)-α-D-ribose

(R)-2,3-dihydroxy-3-methylpentanoate

oxalosuccinate

carbon monoxide

citrate

S-formylglutathione

2-dehydropantoate

(R)-pantothenate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

N-succinyl-L,L-2,6-diaminopimelate

quinolinate

ADP-D-glycero-β-D-manno-heptose

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-oxopropanoate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

shikimate

shikimate 3-phosphate

(S)-3-methyl-2-oxopentanoate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

ADP-L-glycero-β-D-manno-heptose

S-adenosyl 3-(methylsulfanyl)propylamine

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2-amino-6-oxohexanoate

7,8-diaminopelargonate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

4-hydroxy-2-nonenal

4-fumaryl-acetoacetate

acetoacetate

homogentisate

(2-hydroxyphenyl)acetate

thiamine diphosphate

3-amino-1-hydroxyacetone 1-phosphate

O-acetyl-L-serine

O-ureido-L-homoserine

3-methyl-2-oxobutanoate

salicyl alcohol

methylsalicylate

S-ribosyl-L-homocysteine

autoinducer 2

N¹-(5-phospho-β-D-ribosyl)glycinamide

D-gluconate 6-phosphate

hydroxypyruvate

4-guanidinobutyramide

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetylglutamyl-phosphate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

pimeloyl-CoA

8-amino-7-oxononanoate

4-aminobutanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

ammonia

hydroxylamine

γ-L-glutamyl 5-phosphate

hydrogen peroxide

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N-acetyl-L-glutamate 5-semialdehyde

α-D-glucosamine 1-phosphate

urea

2-C-methyl-D-erythritol 4-phosphate

carbonic acid

(4-hydroxyphenyl)acetate

3-deoxy-D-manno-octulosonate 8-phosphate

carbamoyl phosphate

5-phospho-β-D-ribosylamine

5-amino-6-(D-ribitylamino)uracil

nicotinate adenine dinucleotide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

L-arginino-succinate

canavaninosuccinate

L-canavanine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

DNA without lesion

H₂

5-enolpyruvoyl-shikimate 3-phosphate

5-aminolevulinate

porphobilinogen

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-deoxy-α-ribose 1-phosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-amino-4-deoxychorismate

β-nicotinate D-ribonucleotide

squalene

presqualene diphosphate

(2S,5S)-5-carboxymethyl proline

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

(S)-dihydroorotate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

dethiobiotin

orotidine 5'-phosphate

1,4-dihydroxy-2-naphthoate

glycerone phosphate

isopentenyl diphosphate

4'-phosphopantetheine

succinate semialdehyde

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

phosphoenolpyruvate

urea-1-carboxylate

acetyl phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

oxaloacetate

2-phosphoglycolate

glycolate

3-deoxy-α-D-manno-2-octulosonate

lipid A disaccharide (E. coli)

lipid IV_A

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

coproporphyrinogen III

prephenate

CO₂

H₂O

(2E,6E)-farnesyl diphosphate

pristanate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

protoheme

nitrous oxide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

1-oleoyl-2-lyso-glycerone phosphate

CMP-N-acetyl-β-neuraminate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

superoxide

hydroxyl radical

nitric oxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

methanethiol

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

OH^-

nitrite

hydrogencarbonate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

Ni²⁺

Fe²⁺

H⁺

K⁺

ammonium

2-iminosuccinate

2-iminobutanoate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

putrescine

cadaverine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

salicylaldehyde

glycolaldehyde

butan-1-al

formaldehyde

1-octanal

acetaldehyde

(S)-lactaldehyde

phytenal

benzaldehyde

methylglyoxal

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

diacetyl

menadione

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

butan-1-ol

methanol

ethanol

phytol

glycerol

3,4-dihydroxyphenylacetate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

1-oleoyl-sn-glycerol 3-phosphate

1-linoleoyl-sn-glycero-3-phosphocholine

1-palmitoyl-2-linoleoyl-phosphatidylcholine

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₂-Kdo₂-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

(3S)-2,3-epoxy-2,3-dihydrosqualene

all-trans-retinyl palmitate

all-trans-retinol

3-octaprenyl-4-hydroxybenzoate

maltotriose

maltotetraose

sucrose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

GDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

D-gluconate

2'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

isoguanine

2'-deoxyguanosine

dGMP

pppGpp

ppGpp

cyclic-AMP

dAMP

adenylo-succinate

dADP

dATP

dGDP

dGTP

IDP

dIDP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

hypoxanthine

GMP

GDP

GTP

AMP

5'-deoxyadenosine

XTP

XMP

dITP

dIMP

ITP

IMP

ATP

ADP

NADH

NADPH

NAD⁺

NADP⁺

guanosine

adenosine

2-hydroxy-dATP

5-hydroxy-CTP

dCMP

dUMP

dTMP

CMP

UMP

dTTP

dCTP

dUTP

dCDP

dUDP

dTDP

CDP

UDP

UTP

CTP

β-nicotinamide D-ribonucleotide

preQ₁

uracil

adenine

guanine

ethene

estrone

3-β-hydroxyandrost-5-en-17-one

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

isobutanoyl-CoA

methylacrylyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

2-methylacetoacetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

malonyl-CoA

3'-dephospho-CoA

succinyl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

D-glucono-1,5-lactone

FMNH₂

FMN

FADH₂

FAD

(S)-NADHX

(R)-NADHX

ubiquinol-8

ubiquinol-9

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-8

3-demethylubiquinol-9

4-methylphenol

L-homocysteine

coenzyme A

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

nicotinate

pyridoxal 5'-phosphate

4-pyridoxate

pyridoxine

pyridoxamine

pyridoxal

pyridoxine 5'-phosphate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

orotate

preQ₀

(indole-3-yl)acetonitrile

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

benzoate

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

L-glutamine

L-leucine

L-alanine

glycine

L-glutamate

D-glutamate

L-histidine

L-arginine

L-lysine

L-aspartate

L-cysteine

L-threonine

L-tyrosine

L-tryptophan

L-phenylalanine

D-alanine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

N-α-acetyl lysine methyl ester

3-phospho-L-serine

L-citrulline

L-isoleucine

L-valine

L-4-hydroxyglutamate semialdehyde

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-homoserine

L-ornithine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

meso-diaminopimelate

L-methionine

L,L-diaminopimelate

chorismate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

(S)-malate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-2-methylaconitate

cis-aconitate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

butanoate

decanoate

octanoate

(15Z)-tetracosenoate

oleate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

(R)-pantoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate