an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N⁵-carboxyaminoimidazole ribonucleotide

2-iminoacetate

pseudouridine

glutathioselenol

selenodiglutathione

butanoyl phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

octadecanal

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

L-dehydro-ascorbate

pyruvic oxime

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

quinolinate

β-nicotinate D-ribonucleotide

CO₂

phosphoenolpyruvate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

H₂O

hydroxypyruvate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

N-acetyl-L-glutamate 5-semialdehyde

4-amino-4-deoxychorismate

glycolate

2-phosphoglycolate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

shikimate 3-phosphate

shikimate

L-arginino-succinate

L-canavanine

canavaninosuccinate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

oxaloacetate

glycerone phosphate

O-acetyl-L-serine

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

orotidine 5'-phosphate

coniferaldehyde

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

porphobilinogen

5-aminolevulinate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

5-hydroxytryptophol

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

3-methyl-2-oxobutanoate

α-D-glucosamine 1-phosphate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

coproporphyrinogen III

3-dehydroshikimate

glutathione disulfide

preuroporphyrinogen

adenosine 3',5'-bisphosphate

3-phosphooxypyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

2-amino-2-deoxy-D-gluconate 6-phosphate

dihydroxyacetone

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

L-selenocystathionine

L-β-lysine

carbonic acid

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

pseudouridine 5'-phosphate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

carbamoyl phosphate

1,6-anhydro-N-acetyl-β-muramate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

(S)-4-amino-5-oxopentanoate

S-ribosyl-L-homocysteine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

xanthine

selenophosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

S-formylglutathione

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

thiamine diphosphate

2-dehydropantoate

γ-L-glutamyl 5-phosphate

hydrogen selenide

citrate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

histidinol

L-histidinol phosphate

histidinal

ethanolamine

3-keto-β-D-galactose

N-(5-phosphoribosyl)-anthranilate

anthranilate

3-demethylubiquinol-6

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

trimethylamine

trimethylamine N-oxide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

dethiobiotin

pimeloyl-CoA

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

H₂

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

hydrogen peroxide

urea

aminoacetone

lipid IV_A

lipid A disaccharide (E. coli)

(S)-dihydroorotate

5-enolpyruvoyl-shikimate 3-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

succinate semialdehyde

2-dehydro-3-deoxy-D-gluconate

oxalosuccinate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

poly (glycerol phosphate)

CDP-glycerol

acetyl phosphate

β-D-ribosylnicotinate

arsenite

lipid X

2-C-methyl-D-erythritol 4-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

4-aminobutanoate

prephenate

L-arogenate

(R)-pantothenate

S-acetyldihydrolipoamide

dihydrolipoamide

2-(α-hydroxyethyl)thiamine diphosphate

chloramphenicol

3-deoxy-D-glycero-2,5-hexodiulosonate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

tartronate semialdehyde

4-hydroxy-2-nonenal

5-methylcytosine

α-ribazole

α-ribazole 5'-phosphate

nicotinate adenine dinucleotide

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-pyrimidinemethanol

salicyl alcohol

5-oxo-L-proline

DNA without lesion

1,4-dihydroxy-2-naphthoate

core oligosaccharide-lipid A (E. coli K-12 core type)

M_LPS

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

histamine

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

hydroxylamine

autoinducer 2

N-ethylsuccinimide

N-ethylmaleimide

(lipoyl)adenylate

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

1-deoxy-L-glycero-tetrulose 4-phosphate

tryptamine

5-methoxyindoleacetaldehyde

5-methoxytryptamine

methylamine

crotonate

itaconate

norspermidine

carboxynorspermidine

carboxyspermidine

propane-1,3-diamine

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

carbon monoxide

octopamine

(4-hydroxyphenyl)acetate

(R)-synephrine

dialurate

5,6-dimethylbenzimidazole

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran-borate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

acetoacetate

ammonia

7-epicholate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

(2E,6E)-farnesyl diphosphate

pristanate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-methionine

L-cysteine

glycine

L-alanine

L-tryptophan

L-valine

L-isoleucine

L-leucine

L-selenocysteine

L-phenylalanine

L-proline

L-serine

L-aspartyl-4-phosphate

L-aspartate

L-arginine

L-ornithine

L-glutamate

L-glutamine

L-cystathionine

L-threonine

L-lysine

L,L-diaminopimelate

L-tyrosine

L-histidine

L-asparagine

L-2,4-diaminobutanoate

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-aspartate

N-acetyl-L-citrulline

L-citrulline

L-homocysteine

O-succinyl-L-homoserine

L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-canaline

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

L-selenomethionine

D-octopine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-phospho-L-serine

D-glutamate

D-alanine

D-aspartate

β-alanine

(S)-3-amino-2-methylpropanoate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

ADP

ATP

AMP

GDP

GMP

ppGpp

GTP

pppGpp

cyclic-AMP

5'-deoxyadenosine

2'-deoxyinosine

2'-deoxyadenosine

IMP

adenylo-succinate

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dADP

dATP

dGDP

dGTP

2'-deoxyguanosine

hypoxanthine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

ITP

IDP

dITP

dIDP

XMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-β-L-iduronate

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

cytosine

preQ₁

uridine 3'-monophosphate

cytidine-3'-monophosphate

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dUMP

dTMP

dCMP

dCDP

dTDP

dUDP

dUTP

dCTP

dTTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

CMP

UMP

5-hydroxy-CTP

2-hydroxy-dATP

NAD⁺

NADP⁺

NADH

NADPH

thymidine

2'-deoxyuridine

2'-deoxycytidine

inosine

adenosine

guanosine

xanthosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

aldehydo-L-galactonate

L-gulonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

arbutin-6-phosphate

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

XXXG xyloglucan oligosaccharide

colanic acid

β-D-cellobiose

maltotriose

α-Kdo-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

sucrose

α-lactose

maltohexaose

maltotetraose

maltopentaose

maltoheptaose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

betanidin quinone

betanidin

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-18:1-2-18:1-phosphatidylethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

hydroquinone

2,3-dihydroxybenzoate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

dopamine

(R)-adrenaline

(R)-noradrenaline

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

fluoroacetaldehyde

(2E,6E)-farnesal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

phytenal

(S)-lactaldehyde

1-octanal

acetaldehyde

1-propanal

isobutanal

formaldehyde

butan-1-al

(R)-acetoin

Reactive Blue 5

diacetyl

a coenzyme-A group

pyruvate

glyoxylate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

fluoroacetate

orotate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

octanoate

decanoate

palmitate

stearate

butanoate

oleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

linoleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(R)-glycerate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

chorismate

D-glucarate

fumarate

succinate

(S)-malate

4-hydroxybenzoate

4-tyrosol

urate

ferulate

coumarinate

6,7-dehydrobaicalein

baicalein

tyramine

2-phenylethylamine

serotonin

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-6

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

metanephrine

normetanephrine

hydrogen cyanide

acrylonitrile

(indole-3-yl)acetonitrile

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

sepiapterin

7,8-dihydropterin

cyclic pyranopterin phosphate

molybdopterin

molybdopterin adenine dinucleotide

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

L-erythro-7,8-dihydrobiopterin

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

FAD

FMN

riboflavin

reduced riboflavin

FMNH₂

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

aminomethylpyrimidine

formylaminopyrimidine

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

precorrin-2

precorrin-1

nicotinate

nicotinamide

L-ascorbate

thiamine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxamine

pyridoxal

coenzyme A

(R)-lipoate

(R)-NADHX

(S)-NADHX

glycine betaine

L-galactono-1,4-lactone

2-methylbutanoyl-CoA

succinyl-CoA

acetyl-CoA

3'-dephospho-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

isobutanoyl-CoA

malonyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

CoA-disulfide

dihomo γ-linolenoyl-CoA

4-hydroxybutanoyl-CoA

itaconyl-CoA

phenylacetyl-CoA

(S)-3-aminobutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

crotonyl-CoA

ethene

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

heptadecane

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

acetamide

(S)-2-chloropropanoate

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

choline sulfate

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

putrescine

spermidine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

tetrahydroxoborate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Mg²⁺

Cd²⁺

Zn²⁺

Cu²⁺

Fe²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

methanethiol

S-sulfanylglutathione

chloramphenicol 3-acetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

monodehydroascorbate radical

nitric oxide

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

siroheme

protoheme

nitrous oxide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobyrate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

cob(II)yrinate a,c-diamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminobutanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate