an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

enol-phenylpyruvate

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

α-D-glucosamine 1-phosphate

5,6-dimethylbenzimidazole

dialurate

3-phosphooxypyruvate

(R)-1-amino-2-propanol O-2-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

N⁵-carboxyaminoimidazole ribonucleotide

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

ammonia

(R)-4'-phosphopantothenate

2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

4-amino-2-methyl-5-pyrimidinemethanol

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(R)-mevalonate diphosphate

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

crotonate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

thiamine phosphate

thiamine diphosphate

hydrogen selenide

O-acetyl-L-serine

carbon monoxide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

(R)-mevalonate

(R)-5-phosphomevalonate

prenyl diphosphate

CDP-glycerol

3-methyl-2-oxobutanoate

pyrazine-2-carboxylate

α-D-ribose 1,5-bisphosphate

isopentenyl diphosphate

hydroxylamine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

O-ureido-L-homoserine

orotidine 5'-phosphate

L-canavanine

formamide

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

2-dehydropantoate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

S-methyl-5'-thioinosine

S-Inosyl-L-homocysteine

2-aryl-2-methylmalonate

2-arylpropanoate

carbamoyl phosphate

vanillin

methylamine

4'-phosphopantetheine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

aminoacetone

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

squalene

hop-22(29)-ene

4-amino-4-deoxychorismate

2-phosphoglycolate

glycolate

4-aminobutanoate

succinate semialdehyde

3-oxopropanoate

H₂

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

β-L-arabinose 1-phosphate

quinolinate

hexulose 6-phosphate

β-nicotinate D-ribonucleotide

oxaloacetate

phosphoenolpyruvate

urea

coproporphyrinogen III

(S)-dihydroorotate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

S-methyl-5-thio-α-D-ribose 1-phosphate

nicotinate adenine dinucleotide

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

urea-1-carboxylate

(R)-1-aminopropan-2-ol

α-ribazole

α-ribazole 5'-phosphate

hydrogen peroxide

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

CO₂

ethanolamine

glycerone phosphate

H₂O

(2E,6E)-farnesyl diphosphate

pristanate

methionol

3-(methylsulfanyl)propanal

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

L-cysteate

3-sulfopyruvate

sulfate

sulfite

selenate

thiosulfate

hydrogensulfite

hydrogencarbonate

phosphate

triphosphate

diphosphate

ammonium

H⁺

Cd²⁺

Mn²⁺

Mg²⁺

L-homocysteine

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

dehydrospermidine

putrescine

spermidine

tyramine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

5-amino-4-imidazolecarboxyamide

pyrazinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

glutaryl-CoA

2-methylacetoacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3'-dephospho-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

D-glucono-1,5-lactone

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

nicotinate

pyridoxal 5'-phosphate

adenosylcobalamin

cob(I)alamin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 2'-phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

2'-deoxyadenosine

2'-deoxyguanosine

adenosine

dAMP

dGMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

IDP

GDP

ADP

XMP

GMP

AMP

IMP

ITP

GTP

ATP

dTDP

cytosine

dCMP

dUMP

dTMP

uracil

orotate

dCDP

CDP

dUDP

UDP

dTTP

dCTP

dUTP

CTP

UTP

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-β-L-arabinopyranose

UDP-N-acetyl-α-D-glucosamine

dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose

dTDP-3-acetamido-α-D-fucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-α-D-glucose

UMP

CMP

baicalein

6,7-dehydrobaicalein

4-hydroxybenzoate

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

4-aminobenzoate

L-cysteine

L-tyrosine

L-threonine

L-asparagine

glycine

L-serine

L-glutamine

L-arginine

L-aspartate

L-glutamate

L-phenylalanine

D-aspartate

S-sulfanyl-L-cysteine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

sarcosine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-citrulline

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-canaline

O-phospho-L-homoserine

L-ornithine

L-cystine

L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-selenocysteine

L-methionine

L-leucine

L-alanine

L-cystathionine

β-alanine

chorismate

fumarate

succinate

(S)-malate

(R)-lactate

(R)-glycerate

pyruvate

acetate

formate

propanoate

octanoate

decanoate

(15Z)-tetracosenoate

oleate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

D-gluconate

(R)-pantoate

3-phenyl-2-oxopropanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

butan-1-al

acetaldehyde

1-propanal

isobutanal

formaldehyde

(S)-lactaldehyde

phytenal

(3R)-linalool

(3S)-linalool

myo-inositol

1D-myo-inositol 3-monophosphate

butan-1-ol

ethanol

propan-1-ol

phytol

glycerol

saturated CDP-archaeol

unsaturated CDP-archaeol

2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate

2,3-bis-O-phytanyl-sn-glycerol 1-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

geranyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

phlorisovalerophenone

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

vanillylamine

betanidin

betanidin quinone

maltotriose

maltotetraose

maltoheptaose

maltopentaose

maltohexaose

sucrose

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

β-D-fructofuranose

GDP-α-D-mannose

ADP ribose 1'',2''-cyclic phosphate

ADP ribose 1''-phosphate

ADP-D-ribose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose-1-phosphate

L-fuculose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

sucrose 6^F-phosphate

cyclic-AMP

5'-deoxyadenosine

adenylo-succinate

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

2-iminobutanoate

2-iminosuccinate

cob(II)yrinate a,c-diamide

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosylcobyrate

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoporphyrin IX

protoporphyrinogen IX

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

5,10-methenyltetrahydrofolate mono-L-glutamate