an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

6-carboxyhex-2-enoyl-CoA

2-hydroxy-1,4-benzoquinone

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

vanillin

N-(5-phosphoribosyl)-anthranilate

selenodiglutathione

glutathioselenol

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropyl-3-oxosuccinate

4-amino-2-methyl-5-pyrimidinemethanol

(S)-dihydroorotate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

L-3-cyclohex-2'-enylalanine

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

dehydroprephenate

dialurate

(R)-1-amino-2-propanol O-2-phosphate

2-dehydro-6-phospho-D-gluconate

D-erythro-imidazole-glycerol-phosphate

histidinol

histidinal

5-amino-6-(5-phospho-D-ribosylamino)uracil

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N¹-(5-phospho-β-D-ribosyl)glycinamide

α-D-glucosamine 1-phosphate

N-acetyl-D-muramate 6-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

oxalate

(R)-4'-phosphopantothenate

2-dehydropantoate

3-dehydroquinate

validoxylamine A

validone 7-phosphate

valienone 7-phosphate

validone

valienone

5-epi-valiolone

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

cyclohex-1-ene-1-carbonyl-CoA

L-arginino-succinate

5-amino-6-(5-phospho-D-ribitylamino)uracil

(S)-1-phenylethanol

2-epi-5-epi-valiolone

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

carbamoyl phosphate

(R)-pantothenate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(2S)-lactyl-2-diphospho-5'-guanosine

N⁵-carboxyaminoimidazole ribonucleotide

urocanate

β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine

5-deoxy-α-ribose 1-phosphate

glutathione disulfide

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

urea-1-carboxylate

5-aminolevulinate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

2-keto-D-gluconate

xanthine

sinapate

sinapoyl-CoA

5-hydroxyferulate

5-hydroxy-feruloyl-CoA

(S)-reticuline

(S)-scoulerine

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

aminoacetone

prephytoene diphosphate

6-amino-2-oxohexanoate

dimethylamine

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

6-phospho D-glucono-1,5-lactone

3-oxopropanoate

shikimate

3-dehydroshikimate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

enol-phenylpyruvate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

2-pyrone-4,6-dicarboxylate

5-hydroxyindole thiazolidine carboxylate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

1-piperideine-2-carboxylate

5-aminopentanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-amino-4-deoxychorismate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

orotidine 5'-phosphate

N-Formyl-L-kynurenine

4-pyridoxolactone

carbonic acid

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-ureidoglycolate

urea

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

3-ureidopropanoate

citrate

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-aminobutanoate

ethanolamine

4'-phosphopantetheine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

thiamine diphosphate

(2S)-2-isopropylmalate

4-methyl-2-oxopentanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-phosphooxypyruvate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

acetyl phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

glutathionylspermidine

itaconate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(2S)-4-acetamido-2-aminobutanoate

ectoine

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

carboxymethyloxysuccinate

glycolate

DNA without lesion

prephenate

imidazole acetol-phosphate

L-histidinol phosphate

2-iminoacetate

anthranilate

quinolinate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

carbon monoxide

2-dehydro-3-deoxy-D-gluconate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

ammonia

3'-phosphoadenylyl-sulfate

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

nicotinate adenine dinucleotide

coproporphyrinogen III

arsenite

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-β-D-glucuronide

succinate semialdehyde

2-maleylacetate

4-methylsalicylate

5-methylsalicylate

D-gluconate 6-phosphate

tartronate semialdehyde

5-dehydro-D-gluconate

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

2-hydroxy-cyclohexane-1-carbonyl-CoA

2-ketocyclohexane-1-carbonyl-CoA

salicyl alcohol

methylsalicylate

hydrogen peroxide

2,3,5,6-tetracholorophenol

β-D-ribosylnicotinate

4-fumaryl-acetoacetate

acetoacetate

(E)-2-benzylidenesuccinyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

S-(hydroxymethyl)mycothiol

S-formylmycothiol

β-nicotinate D-ribonucleotide

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

phosphoenolpyruvate

dihydroxyacetone

secologanin

tryptamine

3-α(S)-strictosidine

3-keto-β-D-galactose

nitrilotriacetate

iminodiacetate

H₂

glycerone phosphate

hydrogen selenide

O-acetyl-L-serine

(+)-muconolactone

cis,cis-muconate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

oxaloacetate

muconolactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

nigerose

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

pimeloyl-CoA

8-amino-7-oxononanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

L-dehydro-ascorbate

CO₂

H₂O

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(2E,6E)-farnesyl diphosphate

pristanate

fluoroacetaldehyde

glycolaldehyde

3-(N-morpholino)propanal

salicylaldehyde

β-D-ribopyranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

D-glyceraldehyde

L-glyceraldehyde

formaldehyde

1-propanal

isobutanal

butan-1-al

1-octanal

acetaldehyde

(S)-lactaldehyde

phytenal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

methylglyoxal

diacetyl

acetophenone

2,5-dichloro-p-quinone

menadione

hydroxyquinol

butan-1-ol

ethanol

propan-1-ol

methanol

phytol

glycerol

galactitol

(3R)-linalool

(3S)-linalool

2,3-dihydroxybenzoate

biphenyl-2,3-diol

catechol

4-methylcatechol

4-chlorocatechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

phytate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

D-myo-inositol (1,2,3,5,6) pentakisphosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

2-trans,6-cis-tridecadienoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

geranyl diphosphate

geranylgeranyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

15-cis-phytoene

all-trans-phytoene

all-trans-retinyl palmitate

all-trans-retinol

3-octaprenyl-4-hydroxybenzoate

5-deoxy-dihydrokalafungin

(S)-DNPA

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

phlorisovalerophenone

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

betanidin

betanidin quinone

actinorhodin intermediate

actinorhodin

dihydrokalafungin

validamycin A

coumarin

scopoletin

4-methylumbelliferone

1-(β-D ribofuranosyl)nicotinamide

keto-D-fructose

β-D-fructofuranose

3,6-anhydro-α-L-galactopyranose

5-chloro-5-deoxy-D-ribose

5-chloro-5-deoxy-D-ribono-γ-lactone

D-xylulose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-neuraminate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

3'-ketolactose

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

sucrose 6^G-phosphate

α,α-trehalose 6-phosphate

CMP-N-acetyl-β-neuraminate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-α-D-glucuronate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-galactosamine

UDP-N-acetyl-α-D-glucosamine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannose

GDP-α-D-mannuronate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

6-deoxy-5-ketofructose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

lotaustralin

taxiphyllin

linustatin

neolinustatin

linamarin

aldehydo-D-galacturonate

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

raffinose

maltotetraose

stachyose

maltoheptaose

maltopentaose

maltohexaose

α-maltose

melibiose

sucrose

allolactose

α,α-trehalose

α-lactose

β-D-cellobiose

neoagarobiose

neoagarotetraose

neoagarohexaose

agaropentaose

agarotriose

L-idonate

D-gluconate

aldehydo-L-galactonate

L-gulonate

8-oxo-GTP

8-oxo-GMP

cyclic-AMP

cyclic-GMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

hypoxanthine

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

isoguanine

ppGpp

pppGpp

8-oxo-dGTP

8-oxo-dGMP

ITP

IDP

GTP

GDP

dGTP

2'-deoxyguanosine

5'-deoxyadenosine

XMP

IMP

GMP

2'-deoxyadenosine

2'-deoxyinosine

ATP

ADP

adenylo-succinate

AMP

5,6-dihydrouracil

5,6-dihydrothymine

NADPH

NADH

NADP⁺

NAD⁺

5'-deoxy-5'-fluoroadenosine

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

xanthosine

guanosine

adenosine

inosine

5-hydroxy-CTP

dUMP

dTMP

dCMP

UMP

CMP

dTTP

dCTP

dUTP

UDP

CTP

UTP

β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate

preQ₁

thymine

uracil

guanine

adenine

hypoglycin B

L-citrulline

L-methionine

L-tyrosine

L-histidine

L-threonine

L-tryptophan

L-asparagine

L-isoleucine

L-leucine

L-valine

L-arginine

L-proline

L-aspartate

L-phenylalanine

L-lysine

L-glutamine

L-glutamate

L-serine

L-alanine

glycine

L-cysteine

L-homoserine

L-glutamate-5-semialdehyde

L-4-hydroxyglutamate semialdehyde

hypoglycin A

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-ornithine

S-sulfo-L-cysteine

L-homocysteine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-selenocysteine

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

L-cystathionine

N⁶,N⁶-dimethyl-L-arginine

N-formyl-L-methionine

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

D-glutamate

D-lysine

D-alanine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

O-acetyl-L-homoserine

4-methylphenol

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

DNA with lesion

phenylacetate

ethylphosphate

adenosylcobalamin

cob(I)alamin

cob(II)yrinate a,c-diamide

Mg-protoporphyrin

adenosylcobyrate

cob(I)inamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

protoheme

N₂

hydrogen cyanide

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

superoxide

hydroxyl radical

monodehydroascorbate radical

nitric oxide

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

mycothiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

H⁺

ammonium

Fe²⁺

Mg²⁺

glycine betaine

betaine aldehyde

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

cadaverine

putrescine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

fluoroacetate

5-chlorohydroxyquinol

5-chlorohydroxyquinone

2,5-dichloro-p-quinol

2-chloromaleylacetate

chloroethylmalonyl-CoA

4-chloro-crotonyl-CoA

4-chloro-3-hydroxybutyryl-CoA

3-chloro-cis,cis-muconate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,4,5-trichloro-phenoxyacetate

2,4,5-trichlorophenol

4-chlorosalicylate

5-chlorosalicylate

pentachlorophenol

allantoate

acetamide

(S)-(+)-allantoin

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

phenylacetyl-CoA

2-methylbutanoyl-CoA

isobutanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

trans-caffeoyl-CoA

3'-dephospho-CoA

itaconyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

dihomo γ-linolenoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

malonyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

acetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

oxidized coenzyme F₄₂₀-0

oxidized coenzyme F₄₂₀-1

oxidized coenzyme F₄₂₀-2

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

L-ascorbate

riboflavin

nicotinate

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxal

(S)-1-pyrroline-5-carboxylate

salinosporamide A

precorrin-3A

precorrin-3B

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-4

precorrin-5

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

orotate

baicalein

6,7-dehydrobaicalein

luteolin

preQ₀

acrylonitrile

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

4-hydroxybenzoate

urate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-methoxy-4-hydroxyphenylglycol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

menadiol

2,3,5,6-tetrachlorohydroquinone

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

4-coumarate

coumarinate

trans-caffeate

vanillate

salicylate

5-chloroprotocatechuate

4-aminobenzoate

benzoate

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

propanoate

butanoate

decanoate

octanoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

(9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate

dinor-12-oxo-phytodienoate

palmitate

stearate

(R)-pantoate

5-deoxy-D-glucuronate

aldehydo-D-glucuronate

β-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxobutanoate

2-oxoglutarate

glyoxylate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

a coenzyme-A group