an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

CDP-glycerol

S-ribosyl-L-homocysteine

autoinducer 2

4-amino-2-methyl-5-pyrimidinemethanol

N⁵-carboxyaminoimidazole ribonucleotide

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

dihydrophloroglucinol

phloroglucinol

pyrogallol

1,2,3,5-tetrahydroxybenzene

pseudouridine

gallate

2-amino-3-carboxymuconate-6-semialdehyde

1,4-dihydroxy-2-naphthoyl-CoA

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

isochorismate

selenodiglutathione

glutathioselenol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

dialurate

1,4-dihydroxy-2-naphthoate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

acetoacetate

ammonia

hydroxylamine

3-keto-β-D-galactose

(24S)-24-hydroxycholesterol

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

5-oxo-L-proline

1-deoxy-L-glycero-tetrulose 4-phosphate

(S)-2,3-dihydrodipicolinate

thiamine diphosphate

2-oleoylglycerol

α-ribazole

nigerose

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

carboxynorspermidine

norspermidine

DNA without lesion

4-prenylphlorisobutyrophenone

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

arsenite

(R)-pantothenate

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

α-D-glucosamine 1-phosphate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

N-carbamoylputrescine

carbamoyl phosphate

orotidine 5'-phosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

histidinal

D-erythro-imidazole-glycerol-phosphate

urea-1-carboxylate

5-androstene-3,17-dione

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

N-acetylmuramoyl-L-ala-D-glu-(L)-meso-diaminopimelate -(L)-D-ala

N-acetylmuramoyl-L-ala-D-glu

N-acetyl-L,L-2,6-diaminopimelate

cyclohex-1,5-diene-1-carbonyl-CoA

2-iminoacetate

N-ethylglycine

ethylamine

methylamine

oxalate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

N-acetyl-L-glutamate 5-semialdehyde

3-ureidopropanoate

(S)-dihydroorotate

glutathione disulfide

quinolinate

oxalosuccinate

prenyl diphosphate

glycolate

4'-phosphopantetheine

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

2-dehydro-3-deoxy-D-gluconate

xanthine

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

3-dehydroshikimate

5-guanidino-2-oxopentanoate

shikimate

β-D-ribosylnicotinate

2-dehydropantoate

coproporphyrinogen III

γ-L-glutamyl 5-phosphate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(R)-2,3-dihydroxy-3-methylpentanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

urea

pseudouridine 5'-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

isopentenyl diphosphate

3-phosphooxypyruvate

S-Inosyl-L-homocysteine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

acetyl phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-dehydroquinate

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

(4-hydroxyphenyl)acetate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

hydrogen selenide

O-acetyl-L-serine

dihydroxyacetone

imidazole acetol-phosphate

L-selenocystathionine

carbon monoxide

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

H₂

nicotinate adenine dinucleotide

4-amino-4-deoxychorismate

N-(5-phosphoribosyl)-anthranilate

anthranilate

(R)-1-amino-2-propanol O-2-phosphate

(R)-1-aminopropan-2-ol

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

α-D-galactosyl-diphosphoundecaprenol

2-oxoglutaramate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

hydroxypyruvate

tartronate semialdehyde

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

L-histidinol phosphate

histidinol

porphobilinogen

preuroporphyrinogen

S-methyl-5'-thioadenosine

hydrogen peroxide

S-adenosyl 3-(methylsulfanyl)propylamine

citrate

oxaloacetate

carbonic acid

CO₂

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

phosphoenolpyruvate

glycerone phosphate

indole-3-ethanol

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

pyruvic oxime

(2E,6E)-farnesyl diphosphate

DNA with lesion

phenylacetate

ethylphosphate

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobyrate

cobalt-precorrin-2

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-factor III

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

N₂

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

uroporphyrinogen-III

siroheme

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

(R)-2-hydroxyglutarate

4-methylphenol

L-homocysteine

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

S-(hydroxymethyl)glutathione

dimethyl sulfide

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

glutathione

methanethiol

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

coenzyme M

taurine

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

Mo²⁺

Ni²⁺

Cu²⁺

Ca²⁺

Cd²⁺

Co²⁺

Fe²⁺

Mg²⁺

H⁺

Na⁺

ammonium

glycine betaine

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

agmatine

putrescine

spermidine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-iminosuccinate

2-iminobutanoate

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

cephalosporin C

deacetylcephalosporin C

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

ethene

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

campesterol

progesterone

campest-4-en-3β-ol

zymosterone

3-dehydro-4-methylzymosterol

5α-cholesta-8-en-3-one

4α-methyl-5α-cholesta-8-en-3-one

4α-methyl-5α-cholest-7-en-3-one

androst-4-ene-3,17-dione

cholesterol

cholest-5-en-3-one

4α-carboxy-5α-cholesta-8,24-dien-3β-ol

4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol

4α-carboxy-5α-cholesta-8-en-3β-ol

4α-carboxy-4β-methyl-5α-cholesta-8-en-3β-ol

3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate

17-α-hydroxyprogesterone

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

meso-diaminopimeloyl-alanine

L-cysteinylglycine

D-alanyl-D-alanine

methylacrylyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

benzoyl-CoA

formyl-CoA

oxalyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

CoA-disulfide

3'-dephospho-CoA

isobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

succinyl-CoA

phenylacetyl-CoA

(3S)-citryl-CoA

acetyl-CoA

crotonyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

propanoyl-CoA

butanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

D-glucono-1,5-lactone

FMNH₂

FMN

FADH₂

FAD

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

menaquinol-8

menaquinol-7

menaquinol-9

menaquinol-6

menaquinol-10

menaquinol-11

menaquinol-12

menaquinol-13

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-9

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-11

demethylmenaquinol-12

demethylmenaquinol-13

molybdopterin

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

L-ascorbate

thiamine

riboflavin

nicotinate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

menadione

(S)-1-pyrroline-5-carboxylate

precorrin-6A

precorrin-7

precorrin-8x

precorrin-6B

precorrin-3B

precorrin-4

precorrin-5

precorrin-3A

precorrin-1

precorrin-2

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

adenine

guanine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

inosine

xanthosine

adenosine

guanosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

ADP

GDP

XMP

GMP

AMP

IMP

ITP

ATP

GTP

dipicolinate

dUMP

dUDP

dUTP

dCTP

5,6-dihydrothymine

5,6-dihydrouracil

orotate

dTTP

dCMP

dCDP

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTMP

dTDP

uracil

CDP

UDP

UTP

CTP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

CMP

UMP

isoguanine

preQ₁

preQ₀

salicylaldehyde

urate

4-hydroxybenzoate

futalosine

dehypoxanthine futalosine

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

protocatechuate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

salicylate

4-aminobenzoate

benzoate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

L-α-amino-ε-keto-pimelate

L-serine

β-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-proline

L-leucine

L-glutamine

glycine

L-alanine

D-glutamate

L-glutamate

N^ω-hydroxy-L-arginine

L-lysine

L-histidine

L-arginine

L-aspartate

L-tyrosine

L-cysteine

L-asparagine

L-threonine

L-tryptophan

L-phenylalanine

D-phenylalanine

D-aspartate

D-alanine

L-aspartyl-4-phosphate

seleno-L-homocysteine

L-selenomethionine

2-hydroxy-5-oxoproline

3-phospho-L-serine

sarcosine

N-carbamoylglycine

N-formyl-L-methionine

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-citrulline

L-isoleucine

L-valine

L-ornithine

1-aminocyclopropane-1-carboxylate

hypoglycin A

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-homoserine

O-succinyl-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L,L-diaminopimelate

L-cystathionine

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

pyruvate

acetate

formate

butanoate

octanoate

apo-4'-lycopenoate

phytenate

leukotriene-D4

leukotriene-E4

D-gluconate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

2-oxobutanoate

glyoxylate

methylglyoxal

diacetyl

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

glycolaldehyde

butan-1-al

1-octanal

formaldehyde

1-propanal

isobutanal

acetaldehyde

(R)-lactaldehyde

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

methanol

propan-1-ol

ethanol

phytol

glycerol

(3R)-linalool

(3S)-linalool

ethylene glycol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

apo-4'-lycopenal

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oate

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

sitosterol

3-oxo-24-ethyl-cholest-5-ene

3-oxo-24-ethyl-cholest-4-ene

phytyl diphosphate

3-octaprenyl-4-hydroxybenzoate

phlorisovalerophenone

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

iron(III) dicitrate

ferric-enterobactin complex

1-(β-D ribofuranosyl)nicotinamide

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

maltotriose

selaginose

maltotetraose

sucrose

allolactose

α,α-trehalose

α-lactose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

β-D-fructofuranose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

GDP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

D-altronate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

pppGpp

ppGpp

5'-deoxyadenosine

adenylo-succinate

8-oxo-GTP

8-oxo-dGTP

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B