an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

xanthine

H₂O

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

(S)-dihydroorotate

hydrogen peroxide

luteolin 7-O-β-D-diglucuronide

urea

CO₂

5-methylcytosine

urocanate

4-imidazolone-5-propanoate

formamide

dihydroxyacetone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

acetyl phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

thiamine diphosphate

thiamine phosphate

5-amino-6-(D-ribitylamino)uracil

glycerone phosphate

oxaloacetate

enol-phenylpyruvate

2-dehydro-3-deoxy-D-gluconate

carbamoyl phosphate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-dehydropantoate

ethylamine

N-isopropylammelide

hydroxyatrazine

tartronate semialdehyde

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

nicotinate adenine dinucleotide

2-dehydro-3-deoxy-D-galactonate 6-phosphate

N-succinyl-L,L-2,6-diaminopimelate

coproporphyrinogen III

orotidine 5'-phosphate

4'-phosphopantetheine

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

phosphoenolpyruvate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

shikimate 3-phosphate

shikimate

5-phospho-β-D-ribosylamine

3-keto-β-D-galactose

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

porphobilinogen

5-aminolevulinate

glutathione disulfide

L-selenocystathionine

3-demethylubiquinol-6

citrate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(S)-4-amino-5-oxopentanoate

3-methyl-2-oxobutanoate

(R)-pantothenate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

aminoacetone

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N¹-(5-phospho-β-D-ribosyl)glycinamide

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

S-ribosyl-L-homocysteine

butanoyl phosphate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

4-methyl-2-oxopentanoate

3-dehydroshikimate

3'-phosphoadenylyl-sulfate

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3-dehydroquinate

selenophosphate

3-ureidopropanoate

6-phospho D-glucono-1,5-lactone

anthranilate

N-(5-phosphoribosyl)-anthranilate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

L-histidinol phosphate

histidinol

histidinal

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

ammonia

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

S-acetyldihydrolipoamide

dihydrolipoamide

quinolinate

preuroporphyrinogen

secologanin

N-succinyl-2-amino-6-ketopimelate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(R)-4'-phosphopantothenate

4-amino-4-deoxychorismate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

1,4-dihydroxy-2-naphthoyl-CoA

lipid IV_A

lipid A disaccharide (E. coli)

lipid X

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

γ-L-glutamyl 5-phosphate

O-acetyl-L-serine

6-aminohexanoate

6-aminohexanoate linear dimer

trimethylamine

trimethylamine N-oxide

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

carbonic acid

vanillin

dimethylsulfoniopropanoate

4-acetamidobutanoate

4-acetamidobutanal

D-glucurono-6,3-lactone

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

4-imidazoleacetate

imidazole acetaldehyde

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

hydroxylamine

N,N-dimethyl-1,4-phenylenediamine

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

5-carboxymethyl-2-hydroxymuconate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(4-hydroxyphenyl)acetate

1-pyrroline

4-hydroxy-2-nonenal

salicyl alcohol

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

phenylglyoxylate

2-(4-hydroxyphenyl)-2-oxoacetate

cis,cis-muconate

(+)-muconolactone

muconolactone

(R)-mandelate

(S)-mandelate

N-ethylsuccinimide

N-ethylmaleimide

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

α-D-ribose 1,5-bisphosphate

hexulose 6-phosphate

3-keto-L-gulonate 6-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

chloroacetaldehyde

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxytryptophol

4-pyridoxolactone

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

1-deoxy-L-glycero-tetrulose 4-phosphate

indole-3-ethanol

(2-hydroxyphenyl)acetate

homogentisate

2-dehydro-3-deoxy-D-galactonate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

5-oxo-L-proline

luteolin 7-O-β-D-glucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

β-L-arabinose 1-phosphate

acetoacetate

(S)-ureidoglycolate

hydroxypyruvate

α-ribazole

N-Formyl-L-kynurenine

(S)-2,3,4,5-tetrahydrodipicolinate

DNA without lesion

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

CDP-glycerol

1,4-dihydroxy-2-naphthoate

hydrogen selenide

2-oleoylglycerol

ethanolamine

glycolate

2-phosphoglycolate

3-hydroxypropanal

1,3-propanediol

S-formylglutathione

(R)-mevalonate

N-acetyl-D-muramate 6-phosphate

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

(L-threonylcarbamoyl)adenylate

4-fumaryl-acetoacetate

urea-1-carboxylate

2-(α-hydroxyethyl)thiamine diphosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

2-iminoacetate

chloramphenicol

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

autoinducer 2

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

oxalosuccinate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

norspermidine

carboxynorspermidine

carboxyspermidine

propane-1,3-diamine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

carbon monoxide

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran-borate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

4-maleyl-acetoacetate

H₂

dialurate

α-D-glucosamine 1-phosphate

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

core oligosaccharide-lipid A (E. coli K-12 core type)

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-amino-3-carboxymuconate-6-semialdehyde

methylamine

2-hydroxy-5-carboxymethylmuconate semialdehyde

(4S)-4-hydroxy-2-oxoheptanedioate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

octopamine

(R)-synephrine

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

mercuriphenyl acetate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

4-amino-2-methyl-5-pyrimidinemethanol

(R)-4'-phosphopantothenoyl-L-cysteine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

glutathioselenol

selenodiglutathione

isopropylamine

oxamate

N-carbamoyl-2-oxoglycine

4-oxoglutaramate

pyruvic oxime

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

L-α-amino-ε-keto-pimelate

L-methionine

L-cysteine

L-tryptophan

L-alanine

glycine

L-phenylalanine

L-proline

L-isoleucine

L-leucine

L-valine

L-selenocysteine

L-glutamate

L-aspartate

L-arginine

L-serine

L-histidine

L-aspartyl-4-phosphate

L-asparagine

L-glutamine

L-ornithine

L-tyrosine

L,L-diaminopimelate

L-cystathionine

L-threonine

L-lysine

L-2,4-diaminobutanoate

L-isoglutamine

N-carbamoyl-L-aspartate

N⁶-acetyl-N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-homocysteine

O-phospho-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-4-hydroxyglutamate semialdehyde

L-allo-threonine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenomethionine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

N⁶-hydroxy-L-lysine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

S-methyl-L-methionine

3-phospho-L-serine

D-glutamate

D-alanine

D-aspartate

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

ADP

ATP

2'-deoxyadenosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

AMP

XMP

IMP

GMP

GDP

GTP

dATP

dADP

dGTP

dGDP

ITP

IDP

dITP

dIDP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

ppGpp

pppGpp

cyclic-AMP

dAMP

dGMP

cyclic-GMP

8-oxo-dGMP

8-oxo-dGTP

8-oxo-GMP

8-oxo-GTP

5,6-dihydrouracil

5,6-dihydrothymine

ADP-α-D-glucose

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine

UDP-β-L-arabinopyranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

adenine

guanine

uracil

cytosine

thymine

preQ₁

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

cyclic di-3',5'-guanylate

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dTMP

dUMP

dCMP

dCDP

dTDP

dUDP

dCTP

dTTP

dUTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CMP

5-hydroxy-CTP

NAD⁺

NADP⁺

NADH

NADPH

uridine 3'-monophosphate

cytidine-3'-monophosphate

thymidine

2'-deoxyuridine

2'-deoxycytidine

adenosine

inosine

guanosine

xanthosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-mannonate

D-gluconate

L-gulonate

D-galactonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-galactosylononitol

galactinol

lotaustralin

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

linamarin

neolinustatin

linustatin

taxiphyllin

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

L-fuculose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

L-ascorbate 6-phosphate

D-tagatofuranose 6-phosphate

6-deoxy-5-ketofructose 1-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

sucrose 6^G-phosphate

N,N'-diacetylchitobiose 6'-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

4-deoxy-L-threo-hex-4-enopyranuronate

β-L-rhamnopyranose

α-L-rhamnopyranose

α-L-fucopyranose

β-L-fucopyranose

β-D-fructofuranose

glycolaldehyde

aldehydo-L-arabinose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

aldehydo-D-mannose

D-glyceraldehyde

L-glyceraldehyde

L-ribulose

L-xylulose

L-fuculose

keto-L-rhamnulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-sorbitol 6-phosphate

D-mannitol 1-phosphate

galactitol

D-mannitol

L-arabinitol

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A

glucosyl-(heptosyl)₂-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-glucosyl-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₂-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

galactosyl-(glucosyl)₃-(heptosyl)₃-Kdo₂-lipid A-bisphosphate

sucrose

melibiose

α-maltose

α-lactose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

stachyose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

ferrichrome

anguibactin

aerobactin

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

betanidin quinone

betanidin

vanillylamine

deacetylipecoside

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

D-ononitol

hydroquinone

dopamine

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

protocatechuate

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

catechol

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

(2E,6E)-farnesal

fluoroacetaldehyde

methylglyoxal

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

phytenal

(S)-lactaldehyde

acetaldehyde

formaldehyde

1-octanal

isobutanal

1-propanal

butan-1-al

caldariellaquinone

diacetyl

a methyl group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

acetate

5-deoxy-D-glucuronate

(R)-pantoate

orotate

allantoate

5-chloro-5-deoxy-D-ribonate

fluoroacetate

D-tagaturonate

aldehydo-D-glucuronate

β-D-glucuronate

(S)-1-pyrroline-5-carboxylate

butanoate

octanoate

palmitate

decanoate

stearate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

linoleate

oleate

α-linolenate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-glycerate

cis-aconitate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

4-tyrosol

urate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-hydroxybenzoate

cyanuric acid

benzene

coumarinate

luteolin

6,7-dehydrobaicalein

baicalein

aniline

tyramine

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

atrazine

hydrogen cyanide

preQ₀

acrylonitrile

(indole-3-yl)acetonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

riboflavin

FMN

FAD

FMNH₂

FADH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

hydantoin

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

precorrin-2

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

nicotinate

thiamine

nicotinamide

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxine

4-pyridoxate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

acetyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

malonyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

succinyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

estrone

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

acetamide

2-chloroacetate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

betaine aldehyde hydrate

choline

betaine aldehyde

agmatine

putrescine

cadaverine

spermidine

4-aminobutanal

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

tungstate

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

tetrathionate

tetrahydroxoborate

superoxide

phosphonate

phosphate

triphosphate

diphosphate

chloride

Fe³⁺

Co²⁺

Hg²⁺

Zn²⁺

Fe²⁺

Ni²⁺

Cu²⁺

Mo²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

nitric oxide

hydroxyl radical

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-ureidoglycine

N-acetyl-β-neuraminate 9-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

4-dimethylaminophenylazobenzene

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

Hg⁰

hydrogen sulfide

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrinogen IX

hemin

siroheme

protoheme

nitrous oxide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobalamin 5'-phosphate

adenosylcobyrate

cob(II)yrinate a,c-diamide

cobalt-sirohydrochlorin

cobalt-factor III

cob(II)yrinate c-monoamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminobutanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate