an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

propionamide

(S)-3-methyl-2-oxopentanoate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

dethiobiotin

anthranilate

4-maleyl-acetoacetate

homogentisate

pimeloyl-CoA

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

3-deoxy-D-glycero-2,5-hexodiulosonate

enol-phenylpyruvate

glutathione disulfide

pseudouridine 5'-phosphate

3-keto-β-D-galactose

L-gulono-1,4-lactone

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(R)-3-(phenyl)lactoyl-CoA

4-hydroxy-2-nonenal

urea

N-acetyl-D-muramate 6-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

2-chloro-4-methyl-cis,cis-muconate

oxalosuccinate

tropinone

pseudotropine

tropine

6-amino-2-oxohexanoate

2-keto-L-gulonate

2-(α-hydroxyethyl)thiamine diphosphate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

malonate

methylsalicylate

salicyl alcohol

5-methylcytosine

chloroacetaldehyde

2-chloroethanol

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

O-acetyl-L-serine

hydrogen selenide

acetoacetate

4-fumaryl-acetoacetate

2-iminoacetate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

α-ribazole

(S)-4-hydroxy-2-oxopentanoate

2-maleylacetate

α-D-glucosamine 1-phosphate

quinolinate

DNA without lesion

α-D-glucopyranosyl-diphosphoundecaprenol

α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

β-D-glucosyl-(1,4)-α-D-glucosyl-diphosphoundecaprenol

D-Man-β-(1→4)-GlcA-β-(1→2)-D-Man-α-(1→3)-D-Glc-β-(1→4)-D-Glc-α-1-diphospho-ditrans,octacis-undecaprenol

β-D-GlcA-(1→2)-α-D-Man-(1→3)-β-D-Glc-(1→4)-α-D-Glc-1-diphospho-ditrans,octacis-undecaprenol

methylamine

(S)-2-amino-6-oxohexanoate

4-amino-4-deoxychorismate

succinate semialdehyde

N-ethylammeline

deethylsimazine

glycolate

2-phosphoglycolate

glutarate

(7R)-7-(4-carboxybutanamido)cephalosporanate

3-ureidopropanoate

gallate

digallate

ammonia

S-formylglutathione

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

5'-phosphoguanylyl(3'→5')guanosine

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(E)-2-benzylidenesuccinyl-CoA

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

4-acetamidobutanoate

4-acetamidobutanal

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

2-dehydro-3-deoxy-D-galactonate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

carbonic acid

β-D-ribosylnicotinate

(4-hydroxyphenyl)acetate

N-Formyl-L-kynurenine

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

4-carboxy-2-hydroxymuconate-6-semialdehyde

2-oleoylglycerol

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-aminoacetaldehyde

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

(2-hydroxyphenyl)acetate

(E)-glutaconate

3-hydroxybenzaldehyde

hydroxypyruvate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

1,2-dichloroethane

2-oxopent-4-enoate

2-dehydro-3-deoxy-D-gluconate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

(S)-ureidoglycolate

vanillin

2-pyrone-4,6-dicarboxylate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

dialurate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

5-amino-6-(5-phospho-D-ribitylamino)uracil

acetyl phosphate

H₂

3'-ketosucrose

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

(4S)-4-hydroxy-2-oxoheptanedioate

carbon monoxide

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

4-aminobutanoate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

N-ethylammelide

1-piperideine 6-carboxylate

4,6-CH3(COO-)C-D-Man-β-(1→4)-GlcA-β-(1→2)-6-O-acetyl-D-Man-α-(1→3)-D-Glc-β-(1→4)-D-Glc-α-1-diphospho-ditrans,octacis-undecaprenol

D-Man-β-(1→4)-GlcA-β-(1→2)-6-O-acetyl-D-Man-α-(1→3)-D-Glc-β-(1→4)-D-Glc-α-1-diphospho-ditrans,octacis-undecaprenol

6-O-acetyl-β-D-mannosyl-(1,4)-β-D-glucoronate-(1,2)-α-N-acetyl-D-mannosyl-(1,3)-β-D-glucosyl-(1,4)-α-D-glucosyl-diphosphoundecaprenol

(R)-1-amino-2-propanol O-2-phosphate

tartronate semialdehyde

5-oxo-L-proline

2-dehydro-6-phospho-D-gluconate

L-xylo-hex-3-ulono-1,4-lactone

pseudouridine

autoinducer 2

S-ribosyl-L-homocysteine

N⁵-carboxyaminoimidazole ribonucleotide

4-amino-2-methyl-5-pyrimidinemethanol

formamide

glutathioselenol

selenodiglutathione

mercuriphenyl acetate

α-D-galacturonate 1-phosphate

5-aminopentanoate

1-piperideine-2-carboxylate

4-oxoglutaramate

bisorganyltrisulfane

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

CO₂

orotidine 5'-phosphate

coproporphyrinogen III

2-dehydropantoate

porphobilinogen

5-aminolevulinate

3-dehydroshikimate

shikimate

(R)-4'-phosphopantothenate

(R)-pantothenate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

3-deoxy-D-arabino-heptulosonate 7-phosphate

phosphoenolpyruvate

preuroporphyrinogen

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-methyl-2-oxobutanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

N-acetyl-L-glutamate 5-semialdehyde

L-histidinol phosphate

imidazole acetol-phosphate

(S)-4-amino-5-oxopentanoate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

citrate

oxaloacetate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

nicotinate adenine dinucleotide

α-ribazole 5'-phosphate

β-nicotinate D-ribonucleotide

5,6-dimethylbenzimidazole

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

3-dehydroquinate

shikimate 3-phosphate

hydrogen peroxide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

carbamoyl phosphate

5-enolpyruvoyl-shikimate 3-phosphate

N-(5-phosphoribosyl)-anthranilate

glycerone phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3-oxopropanoate

3-demethylubiquinol-6

ethanolamine

(S)-dihydroorotate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

L-canavanine

γ-L-glutamyl 5-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

lipid IV_A

lipid A disaccharide (E. coli)

3-deoxy-α-D-manno-2-octulosonate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

D-erythro-imidazole-glycerol-phosphate

histidinol

histidinal

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

prenyl diphosphate

2-C-methyl-D-erythritol 4-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-imidazolone-5-propanoate

urocanate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

prephenate

(S)-2,3,4,5-tetrahydrodipicolinate

lipid X

xanthine

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

isopentenyl diphosphate

5-phospho-β-D-ribosylamine

aminoacetone

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

(2E,6E)-farnesyl diphosphate

4-methylphenol

L-homocysteine

L-kynurenine

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-valine

L-selenocysteine

L-methionine

L-cysteine

glycine

L-tryptophan

L-alanine

L-proline

L-leucine

L-phenylalanine

L-isoleucine

L-isoglutamine

L-glutamate

L-glutamine

L-arginine

L-tyrosine

L,L-diaminopimelate

L-threonine

L-aspartate

L-cystathionine

L-lysine

L-aspartyl-4-phosphate

L-serine

L-ornithine

L-histidine

L-asparagine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

L-citrulline

L-canaline

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-4-hydroxyglutamate semialdehyde

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homoserine

O-succinyl-L-homoserine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

meso-diaminopimelate

L-selenomethionine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

S-methyl-L-methionine

D-lysine

D-alanine

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

5'-deoxyadenosine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

pppGpp

8-oxo-dGMP

8-oxo-dGTP

8-oxo-GMP

8-oxo-GTP

ppGpp

isoguanine

GTP

ADP

ATP

AMP

GMP

XMP

dADP

GDP

dGDP

dATP

dGTP

dAMP

dGMP

IMP

ITP

IDP

dITP

dIDP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

2'-deoxyadenosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5,6-dihydrouracil

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

guanine

adenine

thymine

cytosine

uracil

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

cyclic di-3',5'-guanylate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dUMP

dTMP

dCMP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cytidine-3'-monophosphate

uridine 3'-monophosphate

2'-deoxycytidine

2'-deoxyuridine

thymidine

adenosine

inosine

guanosine

xanthosine

cytidine

uridine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

L-gulonate

D-gluconate

D-galactonate

D-altronate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

3-dehydro-D-glucopyranose

lotaustralin

linamarin

neolinustatin

linustatin

taxiphyllin

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^G-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

glycolaldehyde

α-D-xylopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

aldehydo-D-mannose

D-glyceraldehyde

D-xylulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

D-sorbitol

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

allolactose

isoprimeverose

sucrose

α-maltose

α-lactose

α,α-trehalose

maltohexaose

maltoheptaose

maltopentaose

maltotetraose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

(7R)-7 aminocephalosporanate

penicillin N

isopenicillin N

aklaviketone

aklavinone

maggiemycin

ε-rhodomycinone

betanidin quinone

betanidin

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3E)-dec-3-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-undecenoyl-CoA

4-cis-undecenoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-oleoyl-2-lyso-glycerone phosphate

1-linoleoyl-sn-glycero-3-phosphocholine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

protocatechuate

catechol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

4,6-dichloro-3-methylcatechol

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

formaldehyde

isobutanal

1-propanal

1-octanal

butan-1-al

acetaldehyde

caldariellaquinone

diacetyl

a coenzyme-A group

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

trans-cinnamate

salicylate

5-chloroprotocatechuate

vanillate

4-aminobenzoate

benzoate

3-hydroxybenzoate

acetate

allantoate

fluoroacetate

(R)-pantoate

orotate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

palmitate

octanoate

decanoate

stearate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

linoleate

oleate

γ-linolenate

di-homo-γ-linolenate

phytenate

3-oxoadipate

formate

propanoate

(S)-lactate

(R)-lactate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(R)-glycerate

(R)-2-hydroxyglutarate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-aconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

3-methyl-cis,cis-muconate

chorismate

D-galactarate

succinate

fumarate

(S)-malate

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-tyrosol

urate

benzene

coumarinate

6,7-dehydrobaicalein

baicalein

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

2,5-dichlorophenol

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

phenol

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

hydrogen cyanide

preQ₀

(indole-3-yl)acetonitrile

acrylonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FAD

FMN

riboflavin

reduced riboflavin

FADH₂

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

precorrin-1

precorrin-2

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

L-ascorbate

nicotinamide

nicotinate

thiamine

pyridoxamine

pyridoxal

pyridoxine

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

5-chloro-3-methyl-cis-dienelactone

cis-dienelactone

trans-dienelactone

D-galactono-1,4-lactone

L-galactono-1,4-lactone

3-chloro-2-methyl-dienelactone

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(E)-glutaconyl-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

isobutanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

acetyl-CoA

malonyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3'-dephospho-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

(E)-cinnamoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

crotonyl-CoA

androsterone

testosterone

ethene

methyl (indol-3-yl)acetate

phenylacetate

(indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(S)-(+)-allantoin

acetamide

bromochloromethane

3-chloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconate

2-chloroacetate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

choline

betaine aldehyde

betaine aldehyde hydrate

agmatine

spermidine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

(R)-3-(phenyl)lactate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

OH^-

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

triphosphate

diphosphate

chloride

bromide

Fe³⁺

Hg²⁺

Fe²⁺

Co²⁺

Mg²⁺

ammonium

H⁺

Na⁺

K⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

taurine

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

hydrogen sulfide

oxygen

Hg⁰

3,8-divinyl protochlorophyllide a

protochlorophyllide a

chlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

siroheme

protoheme

N₂

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cob(I)yrinate a,c-diamide

cob(I)inamide

cobalt-sirohydrochlorin

cobalt-factor III

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2-iminosuccinate

2-iminobutanoate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate