an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

acetyl phosphate

creatinine

α-D-glucosamine 1-phosphate

carbon monoxide

N-succinyl-L,L-2,6-diaminopimelate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

autoinducer 2

S-ribosyl-L-homocysteine

glutathioselenol

selenodiglutathione

7-epicholate

(S)-ureidoglycolate

4-amino-2-methyl-5-pyrimidinemethanol

2-iminoacetate

5-amino-6-(5-phospho-D-ribitylamino)uracil

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

2-keto-D-gluconate

α-D-galacturonate 1-phosphate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

5-aminopentanoate

1-piperideine 6-carboxylate

1-piperideine-2-carboxylate

aminoacetone

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

5-amino-6-(5-phospho-D-ribosylamino)uracil

H₂O

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

D-gluconate 6-phosphate

prenyl diphosphate

acetoacetate

4-fumaryl-acetoacetate

CO₂

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

2-dehydropantoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

2-dehydro-3-deoxy-D-galactonate

3-keto-β-D-galactose

hydrogen peroxide

1-deoxy-L-glycero-tetrulose 4-phosphate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-isopropylmaleate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

histamine

4'-phosphopantetheine

5-enolpyruvoyl-shikimate 3-phosphate

propane-1,3-diamine

isoquinolin-2(1H)-one

isoquinoline

glycolate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

succinate semialdehyde

O-acetyl-L-serine

hydrogen selenide

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(S)-dihydroorotate

salicyl alcohol

methylsalicylate

2-succinylbenzoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

L-selenocystathionine

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

phosphoenolpyruvate

glycerone phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

xanthine

5-dehydro-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-hydroxy-3-oxosuccinate

L-tartrate

meso-tartrate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-amino-6-(D-ribitylamino)uracil

N-acetyl-L-glutamate 5-semialdehyde

3-dehydroshikimate

shikimate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

carbonic acid

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

shikimate 3-phosphate

citrate

L-gulono-1,4-lactone

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

orotidine 5'-phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

oxaloacetate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

carbamoyl phosphate

N⁵-carboxyaminoimidazole ribonucleotide

isopentenyl diphosphate

3-amino-1-hydroxyacetone 1-phosphate

γ-L-glutamyl 5-phosphate

N-acetyl-β-glucosaminylamine

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

N-Formyl-L-kynurenine

coproporphyrinogen III

4-maleyl-acetoacetate

homogentisate

tartronate semialdehyde

hydroxypyruvate

H₂

glutathione disulfide

urocanate

chloramphenicol

urea

nicotinate adenine dinucleotide

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

thiamine diphosphate

N²-succinylglutamate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

cis,cis-muconate

muconolactone

(+)-muconolactone

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

6-amino-2-oxohexanoate

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

(R)-pantothenate

8-amino-7-oxononanoate

pimeloyl-CoA

dethiobiotin

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2-amino-6-oxohexanoate

glutarate

(7R)-7-(4-carboxybutanamido)cephalosporanate

ethanolamine

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

(R)-mevalonate

L-arginino-succinate

L-canavanine

canavaninosuccinate

N-acetylglutamyl-phosphate

O-ureido-L-homoserine

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

lipid A disaccharide (E. coli)

lipid X

oxalate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-(α-hydroxyethyl)thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

prephenate

anthranilate

lipid IV_A

N-(5-phosphoribosyl)-anthranilate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

6-phospho D-glucono-1,5-lactone

quinolinate

oxalosuccinate

nigerose

D-erythro-imidazole-glycerol-phosphate

DNA without lesion

2-keto-L-gulonate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoate

hexulose 6-phosphate

β-D-galactosyl-(1→4)-N-acetyl-D-glucosamine

N-acetyl-D-muramate 6-phosphate

prephytoene diphosphate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

(2E,6E)-farnesyl diphosphate

pristanate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-kynurenine

L-methionine

L-cysteine

glycine

L-phenylalanine

L-alanine

L-proline

L-selenocysteine

L-tryptophan

L-isoleucine

L-leucine

L-valine

L-serine

L-threonine

L-histidine

L-glutamate

L-ornithine

L-2,4-diaminobutanoate

L-glutamine

L-cystathionine

L-aspartate

L-asparagine

L-tyrosine

L-lysine

L-arginine

L-aspartyl-4-phosphate

L,L-diaminopimelate

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-(octanoyl)-L-homoserine

N-(3-oxohexanoyl)-L-homoserine

N-(butyryl)-L-homoserine

N-(3-oxododecanoyl)-L-homoserine

N-(3-hydroxybutanoyl)-L-homoserine

N-(3-oxooctanoyl)-L-homoserine

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

S-sulfo-L-cysteine

L-homocysteine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-homoserine

meso-diaminopimelate

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

L-saccharopine

L-selenomethionine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

N-acetyl-L-glutamate

sarcosine

3-phospho-L-serine

D-proline

D-glutamate

D-alanine

D-lysine

D-cysteine

D-serine

creatine

β-alanine

AMP

XMP

IMP

GMP

ATP

ADP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

GTP

GDP

dATP

dADP

dGTP

dGDP

ITP

IDP

dITP

dIDP

ppGpp

pppGpp

adenylo-succinate

hypoxanthine

5'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

dGMP

dAMP

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-α-D-mannuronate

GDP-β-L-fucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose

dTDP-3-acetamido-α-D-fucose

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-xylose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-galactosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

guanine

adenine

thymine

uracil

preQ₁

dUMP

dCMP

dTMP

dCDP

dTDP

dUDP

dCTP

dTTP

dUTP

CDP

UDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CMP

5-hydroxy-CTP

NAD⁺

NADP⁺

NADH

NADPH

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

aldehydo-L-galactonate

L-idonate

D-gluconate

D-mannonate

D-altronate

D-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3'-ketolactose

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

4-phospho-D-erythronate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

keto-D-fructose

keto-D-sorbose

keto-L-sorbose

keto-D-tagatose

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

D-glyceraldehyde

D-ribulose

D-xylulose

L-ribulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

3,6-anhydro-α-L-galactopyranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-sorbitol

XXXG xyloglucan oligosaccharide

agarotriose

agaropentaose

neoagarobiose

neoagarotetraose

neoagarohexaose

neocarratetraose 4-O-sulfate

neocarrabiose

neocarratetraose 4-O-disulfate

neocarrabiose sulfate

β-D-cellobiose

maltotriose

α-Kdo-(2→6)-lipid IV_A

melibiose

sucrose

α-maltose

α-lactose

α,α-trehalose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

stachyose

raffinose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

phlorisovalerophenone

salicylaldehyde

4-methylumbelliferone

coumarin

scopoletin

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

15-cis-phytoene

all-trans-phytoene

β-zeacarotene

β-carotene

myxol

plectaniaxanthin

zeaxanthin

β-cryptoxanthin

hydroxy-β-zeacarotene

(7R)-7 aminocephalosporanate

penicillin N

isopenicillin N

octoketide

deoxycohumulone

4-prenylphlorisovalerophenone

deoxyhumulone

(5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

4-trans-undecenoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

3-octaprenyl-4-hydroxybenzoate

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-oleoyl-2-lyso-glycerone phosphate

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1,2-dibutyrin

tributyrin

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

protocatechuate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

butan-1-ol

ethanol

propan-1-ol

phytol

methanol

fluoroacetaldehyde

(2E,6E)-farnesal

methylglyoxal

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

phytenal

(S)-lactaldehyde

butan-1-al

acetaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

(R)-acetoin

diacetyl

a coenzyme-A group

3-oxooctanoate

3-oxo-dodecanoate

pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

salicylate

4-aminobenzoate

benzoate

acetate

fluoroacetate

orotate

(R)-pantoate

allantoate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

stearate

butanoate

palmitate

octanoate

decanoate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

sophorosyloxydocosanoate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

3-oxoadipate

3-oxohexanoate

formate

propanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

(R)-glycerate

(R)-3-hydroxybutanoate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

chorismate

D-glucarate

fumarate

succinate

(S)-malate

4-hydroxybenzoate

urate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

coumarinate

tyramine

4-methylphenol

demethylmenaquinol-8

menaquinol-8

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

preQ₀

hydrogen cyanide

(indole-3-yl)acetonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

riboflavin

FMN

FAD

FADH₂

reduced riboflavin

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(I)alamin

adenosylcobalamin

cobyrinate

sirohydrochlorin

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

precorrin-2

precorrin-1

thiamine

L-ascorbate

nicotinate

nicotinamide

pyridoxamine

pyridoxal

pyridoxine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

coenzyme A

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

L-galactono-1,4-lactone

AAI-1

VAI-1-2

VAI-1

PAI-1-2

HAI-1

PAI-1

L-homoserine lactone

3'-dephospho-CoA

acetyl-CoA

succinyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

phenylacetyl-CoA

γ-linolenoyl-CoA

linoleoyl-CoA

oxalyl-CoA

formyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

α-linolenoyl-CoA

4-hydroxybutanoyl-CoA

(E)-glutaconyl-CoA

dihomo γ-linolenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

glycocholate

isocholate

3-dehydrocholate

cholate

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

acetamide

(S)-2-chloropropanoate

2-chloroacetate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

agmatine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

molybdate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Mg²⁺

Zn²⁺

Cu²⁺

Fe²⁺

Ca²⁺

Co²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

dimethyl sulfide

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

glutathione

3-sulfopyruvate

L-cysteate

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

methanethiol

S-sulfanylglutathione

chloramphenicol 3-acetate

monodehydroascorbate radical

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-β-neuraminate 9-phosphate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

protoporphyrinogen IX

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

Mg-protoporphyrin

siroheme

protoheme

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-sirohydrochlorin

cobalt-factor III

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

DNA with lesion

2-iminosuccinate

2-iminobutanoate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate