an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

ammonia

1,5-anhydro-D-fructose

selenodiglutathione

glutathioselenol

S-ribosyl-L-homocysteine

autoinducer 2

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

nicotinate adenine dinucleotide

5-dehydro-4-deoxy-D-glucarate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

H₂

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

vanillin

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

cyclohex-1,5-diene-1-carbonyl-CoA

crotonate

2-dehydro-6-phospho-D-gluconate

pseudouridine

D-gluconate 6-phosphate

dialurate

(R)-1-amino-2-propanol O-2-phosphate

streptomycin 3''-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

5-carboxymethyl-2-hydroxymuconate

mercuriphenyl acetate

pseudouridine 5'-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

lipid X

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

N-acetyl-D-muramate 6-phosphate

α-ribazole

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

muconolactone

3-methylmuconolactone

3-dehydrocarnitine

L-β-lysine

4-methylsalicylate

5-methylsalicylate

3-methylbenzyl alcohol

3-methylbenzaldehyde

4-methylbenzyl alcohol

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(R)-4'-phosphopantothenoyl-L-cysteine

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

lipid A disaccharide (E. coli)

lipid IV_A

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

DNA without lesion

nitrilotriacetate

iminodiacetate

2-iminoacetate

3-propylcatechol

2-hydroxy-6-oxo-nona-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

N-ethylmaleimide

N-ethylsuccinimide

tartronate semialdehyde

4-amino-4-deoxychorismate

carbonic acid

β-D-ribosylnicotinate

glutathionylspermidine

urea-1-carboxylate

isopentenyl diphosphate

N-succinyl-L,L-2,6-diaminopimelate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

cis,cis-muconate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

arsenite

formamide

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-(α-hydroxyethyl)thiamine diphosphate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

homogentisate

(2-hydroxyphenyl)acetate

4-maleyl-acetoacetate

chloramphenicol

quinolinate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2-amino-6-oxohexanoate

palmitaldehyde

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

carbon monoxide

prephenate

2-maleylacetate

ethanolamine

pyrazine-2-carboxylate

thiamine phosphate

thiamine diphosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

β-nicotinate D-ribonucleotide

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

(L-threonylcarbamoyl)adenylate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

2-phosphoglycolate

glycolate

coniferaldehyde

4-fumaryl-acetoacetate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

L-selenocystathionine

4-hydroxy-2-nonenal

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4-aminobutanoate

succinate semialdehyde

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

S-formylglutathione

glutathione disulfide

2-C-methyl-D-erythritol 4-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

anthranilate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

N¹-(5-phospho-β-D-ribosyl)glycinamide

3'-phosphoadenylyl-sulfate

(S)-ureidoglycolate

urea

xanthine

hydrogen peroxide

5-enolpyruvoyl-shikimate 3-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

acetoacetate

N-acetylglutamyl-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

orotidine 5'-phosphate

3-deoxy-α-D-manno-2-octulosonate

4'-phosphopantetheine

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

oxalosuccinate

2-dehydropantoate

N-(5-phosphoribosyl)-anthranilate

5-phospho-β-D-ribosylamine

(S)-dihydroorotate

O-ureido-L-homoserine

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

hydrogen selenide

O-acetyl-L-serine

shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

histidinal

histidinol

L-histidinol phosphate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2-aminoacetaldehyde

N⁵-carboxyaminoimidazole ribonucleotide

3-oxopropanoate

acetyl phosphate

γ-L-glutamyl 5-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-imidazolone-5-propanoate

urocanate

N-acetyl-L-glutamate 5-semialdehyde

3-demethylubiquinol-6

porphobilinogen

preuroporphyrinogen

canavaninosuccinate

L-canavanine

L-arginino-succinate

α-D-glucosamine 1-phosphate

citrate

carbamoyl phosphate

7,8-diaminopelargonate

dethiobiotin

pimeloyl-CoA

8-amino-7-oxononanoate

(R)-pantothenate

(R)-4'-phosphopantothenate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

5-amino-6-(D-ribitylamino)uracil

(R)-2,3-dihydroxy-3-methylpentanoate

phosphoenolpyruvate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

glycerone phosphate

hydroxypyruvate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

oxaloacetate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

coproporphyrinogen III

CO₂

shikimate

3-dehydroshikimate

H₂O

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

4-oxalocrotonate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

4-oxoglutaramate

1-piperideine 6-carboxylate

(4-hydroxyphenyl)acetate

4-methylphenol

L-homocysteine

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

ethylphosphate

cob(I)inamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

cob(I)alamin

adenosylcobalamin

protoheme

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

(Z,Z)-biliverdin-IX α

Hg⁰

hydrogen sulfide

oxygen

2-chloroacetate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

hydroxyl radical

superoxide

monodehydroascorbate radical

chloramphenicol 3-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

S-(hydroxymethyl)glutathione

methanethiol

glutathione

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

3-sulfocatechol

(R)-S-lactoylglutathione

Fe³⁺

K⁺

H⁺

ammonium

Hg²⁺

Fe²⁺

Mg²⁺

trimethyl sulfonium

selenite

OH^-

molybdate

hydrogensulfite

nitrate

nitrite

selenate

thiosulfate

sulfite

hydrogencarbonate

sulfate

phosphate

triphosphate

diphosphate

chloride

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

putrescine

glycine betaine

choline

betaine aldehyde

betaine aldehyde hydrate

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

aerobactin

sn-glycero-3-phosphocholine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

3-chloro-cis,cis-muconate

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

allantoate

acetamide

(S)-(+)-allantoin

pyrazinamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

nicotinamide

ethene

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

(+)-7-epi-jasmonate

(indol-3-yl)acetate

dodecyl icosanoate

2-methylbutanoyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

(S)-3-aminobutanoyl-CoA

(E)-glutaconyl-CoA

glutaryl-CoA

3-oxo-(11Z)-eicos-11-enoyl-CoA

3R-hydroxy-(11Z)-eicos-11-enoyl-CoA

3-oxo-lesqueroloyl-CoA

3R-hydroxy-lesqueroloyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

γ-linolenoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

dihomo γ-linolenoyl-CoA

malonyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

succinyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

3'-dephospho-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

icosanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

L-ascorbate

thiamine

nicotinate

riboflavin

pyridoxal

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

L-carnitine

menadione

all-trans-retinol

all-trans-retinal

(S)-1-pyrroline-5-carboxylate

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

molybdopterin adenine dinucleotide

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyadenosine

2'-deoxyguanosine

xanthosine

inosine

guanosine

adenosine

hypoxanthine

dIMP

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

XTP

ITP

GTP

ATP

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

cytidine 2',3'-cyclic monophosphate

cytidine-3'-monophosphate

uracil

dCMP

orotate

UTP

dUTP

dTDP

dTTP

dCTP

CTP

dUMP

dTMP

dUDP

UDP

dCDP

CDP

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galactose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

uridine

cytidine

UMP

CMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

(indole-3-yl)acetonitrile

acrylonitrile

preQ₀

2-propylphenol

salicylaldehyde

urate

benzene

benzyl alcohol

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

4-hydroxybenzoate

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

4-methylbenzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

phenol

2,3-dihydroxybenzoate

3-methylcatechol

4-methylcatechol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

catechol

protocatechuate

ferulate

vanillate

salicylate

benzoate

4-aminobenzoate

4-methylbenzoate

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

L-aspartate

(S)-malate

D-glucarate

D-galactarate

(2S,3S)-2-methylcitrate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

cis-aconitate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(S)-lactate

(R)-lactate

propanoate

acetate

pyruvate

formate

butanoate

decanoate

octanoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

stearate

pristanate

palmitate

D-gluconate

(R)-pantoate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

D-serine

L-serine

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

L-alanine

L-glutamine

glycine

L-leucine

D-glutamate

L-glutamate

L-histidine

L-lysine

L-arginine

L-tyrosine

L-asparagine

L-threonine

L-cysteine

L-tryptophan

L-phenylalanine

D-proline

D-cysteine

D-aspartate

D-alanine

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

3-phospho-L-serine

N⁶-acetyl-N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N⁶-hydroxy-L-lysine

N-carbamoyl-L-aspartate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

L-valine

L-isoleucine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-ornithine

L-homoserine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-4-hydroxyglutamate semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-isoglutamine

a coenzyme-A group

methylglyoxal

diacetyl

(R)-acetoin

3-(N-morpholino)propanal

glycolaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

acetaldehyde

butan-1-al

(S)-lactaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

β-D-galactopyranose

L-sorbosone

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

propan-1-ol

ethanol

methanol

1-octanol

1-dodecanol

phytol

glycerol

galactitol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

(R,R)-2,3-butanediol

myo-inositol

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

apo-4'-lycopenal

zeinoxanthin

α-carotene

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

betanidin

betanidin quinone

streptomycin

1-(β-D ribofuranosyl)nicotinamide

sucrose

1,5-anhydro-D-mannitol

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

keto-L-sorbose

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

ppGpp

pppGpp

adenylo-succinate

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

8-oxo-GTP

8-oxo-dGTP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-hydroxy-CTP

5-hydroxy-CMP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate