an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(R)-pantothenate

2-dehydropantoate

3-methyl-2-oxobutanoate

O-acetyl-L-serine

hydrogen selenide

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

tartronate semialdehyde

hydroxypyruvate

citrate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

4-pyridoxolactone

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

γ-L-glutamyl 5-phosphate

acetyl phosphate

(2S)-2-isopropylmalate

coniferaldehyde

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

hydrogen peroxide

glycolate

2-phosphoglycolate

DNA without lesion

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-oxo-3-phenylpropanoyl-CoA

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

anthranilate

N-(5-phosphoribosyl)-anthranilate

preuroporphyrinogen

porphobilinogen

L-canavanine

canavaninosuccinate

L-arginino-succinate

5-amino-6-(D-ribitylamino)uracil

ethanolamine

(L-threonylcarbamoyl)adenylate

glutathione disulfide

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

3''-adenylylstreptomycin

carbon monoxide

oxaloacetate

α-D-galactosyl-diphosphoundecaprenol

nigerose

2-oxoglutaramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

β-nicotinate D-ribonucleotide

S-ribosyl-L-homocysteine

5-deoxy-α-ribose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

(S)-3-methyl-2-oxopentanoate

2-phenylethanol

2-methylbutanal

2-methylbutanol

3-methylbutanal

3-methylbutanol

isobutanol

indole-3-glycol aldehyde

indole-3-glycol

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

indole-3-ethanol

2-maleylacetate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

xanthine

(2-hydroxyphenyl)acetate

enol-phenylpyruvate

homogentisate

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

acetoacetate

urocanate

4-imidazolone-5-propanoate

formamide

thiamine diphosphate

thiamine phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

vanillin

urea

(S)-ureidoglycolate

orotidine 5'-phosphate

α-D-glucosamine 1-phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

3-oxopropanoate

succinate semialdehyde

4-aminobutanoate

D-erythro-imidazole-glycerol-phosphate

shikimate 3-phosphate

shikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

prenyl diphosphate

isopentenyl diphosphate

3-phosphooxypyruvate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinylglutamate

coproporphyrinogen III

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-phospho-β-D-ribosylamine

L-selenocystathionine

5-carboxymethyl-2-hydroxymuconate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

2-chloroethanol

1,2-dichloroethane

glutathionylspermidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

methylsalicylate

salicyl alcohol

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

3'-phosphoadenylyl-sulfate

N-succinyl-L,L-2,6-diaminopimelate

itaconate

chloramphenicol

carbamoyl phosphate

2-oleoylglycerol

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

nicotinate adenine dinucleotide

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

oxalosuccinate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

propane-1,3-diamine

2-(α-hydroxyethyl)thiamine diphosphate

L-β-lysine

histamine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-iminoacetate

(S)-dihydroorotate

2-keto-D-gluconate

2-aminoacetaldehyde

2-keto-L-gulonate

5-methylsalicylate

4-methylsalicylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

pseudouridine 5'-phosphate

lipid X

4-acetamidobutanoate

4-acetamidobutanal

prephenate

3-dehydroshikimate

O-ureido-L-homoserine

2-C-methyl-D-erythritol 4-phosphate

3-hydroxyanthranilate

N-Formyl-L-kynurenine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

L-quinate

cis,cis-muconate

3-methylmuconolactone

muconolactone

2,5-dioxopentanoate

4-methylbenzyl alcohol

3-methylbenzaldehyde

3-methylbenzyl alcohol

(S)-2-amino-6-oxohexanoate

L-gulono-1,4-lactone

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

iminodiacetate

nitrilotriacetate

S-formylglutathione

β-D-ribosylnicotinate

adenosine 5'-phosphosulfate

4'-phosphopantetheine

5-enolpyruvoyl-shikimate 3-phosphate

lipid A disaccharide (E. coli)

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

3-deoxy-α-D-manno-2-octulosonate

lipid IV_A

dethiobiotin

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

malonate

carbonic acid

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

urea-1-carboxylate

cyanamide

5-methylcytosine

L-tartrate

5-dehydro-4-deoxy-D-glucarate

adenosine 5'-phosphoselenate

6-amino-2-oxohexanoate

2-hydroxy-3-oxosuccinate

meso-tartrate

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

2-amino-3-carboxymuconate-6-semialdehyde

5-oxo-L-proline

glutathioselenol

selenodiglutathione

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(R)-1-amino-2-propanol O-2-phosphate

dialurate

2-dehydro-6-phospho-D-gluconate

L-xylo-hex-3-ulono-1,4-lactone

H₂

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

pseudouridine

crotonate

cyclohex-1,5-diene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

3-hydroxypimeloyl-CoA

3-oxopimeloyl-CoA

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

chloroacetaldehyde

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

autoinducer 2

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

pyruvic oxime

1,5-anhydro-D-fructose

α-D-galacturonate 1-phosphate

5-aminopentanoate

1-piperideine 6-carboxylate

1-piperideine-2-carboxylate

4-oxoglutaramate

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

hydroxylamine

ammonia

3-dehydrocarnitine

CO₂

quinolinate

glycerone phosphate

4-amino-4-deoxychorismate

L-histidinol phosphate

imidazole acetol-phosphate

histidinol

histidinal

phosphoenolpyruvate

4-hydroxy-2-nonenal

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

1-oleoyl-2-lyso-glycerone phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

Reactive Blue 5

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

hydrogen sulfide

oxygen

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

protoporphyrin IX

uroporphyrinogen-III

Mg-protoporphyrin

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

magnesium-protoporphyrin IX 13-monomethyl ester

protoheme

(Z,Z)-biliverdin-IX α

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

phosphonoacetaldehyde

ethylphosphate

phenylacetate

DNA with lesion

a properly matched DNA base pair

a mismatched DNA base pair

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

4-methylphenol

L-homocysteine

(2E,6E)-farnesyl diphosphate

pristanate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-arginine

N^ω-hydroxy-L-arginine

L-lysine

L-histidine

D-glutamate

L-glutamate

L-serine

L-leucine

glycine

L-alanine

L-glutamine

L-proline

β-alanine

(R)-β-lysine

(S)-3-amino-2-methylpropanoate

D-serine

L-selenocysteine

L-isoleucine

L-tryptophan

L-valine

L-methionine

L-cysteine

L-phenylalanine

L-cystathionine

L-aspartate

L-asparagine

L-ornithine

L-tyrosine

L,L-diaminopimelate

L-2,4-diaminobutanoate

L-aspartyl-4-phosphate

L-isoglutamine

L-threonine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

L-citrulline

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-canaline

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-saccharopine

L-selenomethionine

seleno-L-homocysteine

3-phospho-L-serine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N-acetyl-L-glutamate

S-methyl-L-methionine

D-alanine

D-aspartate

D-lysine

D-cysteine

ppGpp

GDP

pppGpp

GTP

dITP

dIDP

ITP

IDP

dGTP

dGDP

dATP

dADP

cyclic-AMP

GMP

XMP

5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

hypoxanthine

2'-deoxyguanosine

IMP

cyclic-GMP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

2'-deoxyinosine

2'-deoxyadenosine

AMP

ATP

1-(5-phospho-β-D-ribosyl)-ATP

ADP

GDP-α-D-mannuronate

GDP-α-D-mannose

CDP-4-dehydro-3,6-dideoxy-α-D-glucose

CDP-α-abequose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

adenine

guanine

uracil

thymine

cytosine

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

dTMP

dCMP

dUMP

dUDP

dCDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

UTP

CTP

CMP

UMP

2-hydroxy-dATP

5-hydroxy-CTP

xanthosine

guanosine

inosine

adenosine

cytidine

uridine

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

L-gulonate

D-gluconate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

streptomycin

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

6-deoxy-5-ketofructose 1-phosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

β-D-fructofuranose

1,5-anhydro-D-mannitol

keto-L-sorbose

glycolaldehyde

aldehydo-L-arabinose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

D-glyceraldehyde

L-glyceraldehyde

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

galactitol

D-sorbitol

L-arabinitol

sucrose

α,α-trehalose

aldehydo-D-galacturonate

salicylaldehyde

all-trans-retinal

all-trans-retinol

all-trans-retinyl palmitate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

apo-4'-lycopenoate

enterobactin

vanillylamine

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

1,2-dibutyrin

tributyrin

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

benzyl alcohol

myo-inositol

1-amino-1-deoxy-scyllo-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

2,3-dihydroxybenzoate

4-chlorocatechol

4-methylcatechol

catechol

protocatechuate

(R,R)-2,3-butanediol

phytol

propan-1-ol

ethanol

butan-1-ol

methanol

3-(N-morpholino)propanal

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

4-methylbenzaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

isobutanal

1-propanal

acetaldehyde

formaldehyde

1-octanal

butan-1-al

(R)-acetoin

menadione

diacetyl

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

2-oxoglutarate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

vanillate

4-aminobenzoate

benzoate

4-methylbenzoate

(R)-pantoate

acetate

5-chloro-5-deoxy-D-ribonate

allantoate

orotate

fluoroacetate

L-carnitine

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

leukotriene-E4

leukotriene-D4

octanoate

butanoate

stearate

palmitate

decanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

(3E,5Z)-tetradecadienoate

γ-linolenate

linoleate

oleate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(2R,3S)-2-methylisocitrate

(R)-3-hydroxybutanoate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

D-glucarate

D-galactarate

fumarate

succinate

(S)-malate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

4-hydroxybenzoate

ferulate

5-chlorosalicylate

4-chlorosalicylate

3-chlorobenzaldehyde

3-chlorobenzyl alcohol

2,5-dichlorophenol

phenol

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

preQ₀

acrylonitrile

(indole-3-yl)acetonitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

cyclic pyranopterin phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FAD

FMN

riboflavin

FADH₂

FMNH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

nicotinate

L-ascorbate

nicotinamide

thiamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine

pyridoxamine

4-pyridoxate

coenzyme A

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

α-linolenoyl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

3R-hydroxy-lesqueroloyl-CoA

3-oxo-lesqueroloyl-CoA

3R-hydroxy-(11Z)-eicos-11-enoyl-CoA

3-oxo-(11Z)-eicos-11-enoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

choloyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

3'-dephospho-CoA

(+)-7-epi-jasmonoyl-CoA

dihomo γ-linolenoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

benzoyl-CoA

chenodeoxycholoyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

γ-linolenoyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

itaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

trans-feruloyl-CoA

isobutanoyl-CoA

(S)-3-aminobutanoyl-CoA

2-methylbutanoyl-CoA

glutaryl-CoA

(E)-glutaconyl-CoA

malonyl-CoA

acetyl-CoA

linoleoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

decanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

estrone

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25R)-3α,7α,12α-trihydroxy-5β-cholestan-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

acetamide

bromochloromethane

3-chloro-cis,cis-muconate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphocholine

choline

betaine aldehyde

betaine aldehyde hydrate

spermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

Fe³⁺

ammonium

H⁺

Fe²⁺

Mg²⁺

trimethyl sulfonium

thiosulfate

superoxide

sulfite

nitrite

nitrate

selenate

selenite

molybdate

hydrogensulfite

OH^-

sulfate

hydrogencarbonate

bromide

chloride

phosphate

triphosphate

diphosphate

3-(methylsulfanyl)propanal

methionol

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

methanesulfonate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

thiocyanate

S-sulfanylglutathione

chloramphenicol 3-acetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-iminobutanoate

2-iminosuccinate

L-malic semialdehyde

trimethylamine