an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
S-ribosyl-L-homocysteine
autoinducer 2
selenodiglutathione
glutathioselenol
glutathione disulfide
pseudouridine
4-amino-2-methyl-5-pyrimidinemethanol
L-dehydro-ascorbate
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate
(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA
5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
(2Z,4Z)-2-hydroxyhexa-2,4-dienoate
(S)-4-hydroxy-2-oxohexanoate
(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate
L-xylo-hex-3-ulono-1,4-lactone
N5-carboxyaminoimidazole ribonucleotide
2-amino-3-carboxymuconate-6-semialdehyde
α-D-galacturonate 1-phosphate
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
3-amino-1-hydroxyacetone 1-phosphate
ammonia
1-deoxy-L-glycero-tetrulose 4-phosphate
3-methyl-2-oxobutanoate
2-dehydropantoate
nicotinate adenine dinucleotide
α-ribazole
5,6-dimethylbenzimidazole
β-nicotinate D-ribonucleotide
α-ribazole 5'-phosphate
N-(5-phosphoribosyl)-anthranilate
3-oxo-5,6-didehydrosuberyl-CoA semialdehyde
3-oxo-5,6-didehydrosuberyl-CoA
2-oxepin-2(3H)-ylideneacetyl-CoA
S-adenosyl-4-methylsulfanyl-2-oxobutanoate
2-(α-hydroxyethyl)thiamine diphosphate
7,8-diaminopelargonate
dethiobiotin
pimeloyl-CoA
chlorate
8-amino-7-oxononanoate
histidinal
histidinol
L-histidinol phosphate
D-erythro-imidazole-glycerol-phosphate
imidazole acetol-phosphate
anthranilate
3-oxopropanoate
4-aminobutanoate
succinate semialdehyde
5-carboxymethyl-2-hydroxymuconate
6-phospho D-glucono-1,5-lactone
L-canavanine
O-ureido-L-homoserine
canavaninosuccinate
L-arginino-succinate
N-acetylglutamyl-phosphate
5-amino-6-(D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribitylamino)uracil
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribosylamino)uracil
(R)-4'-phosphopantothenate
(R)-4'-phosphopantothenoyl-L-cysteine
(S)-dihydroorotate
carbamoyl phosphate
3-deoxy-D-arabino-heptulosonate 7-phosphate
3-dehydroquinate
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
shikimate
3-dehydroshikimate
oxalosuccinate
mercuriphenyl acetate
1-phosphatidyl-myo-inositol
1-phosphatidyl-myo-inositol 2-mannose
coproporphyrinogen III
dialurate
(R)-1-amino-2-propanol O-2-phosphate
citrate
N-acetyl-D-muramate 6-phosphate
1,4-dihydroxy-2-naphthoate
2-maleylacetate
pseudouridine 5'-phosphate
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
2-C-methyl-D-erythritol 4-phosphate
4'-phosphopantetheine
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
thiamine phosphate
vanillin
thiamine diphosphate
(2S)-2-isopropylmalate
2-isopropylmaleate
(2R,3S)-3-isopropylmalate
adenosine 5'-phosphoselenate
adenosine 5'-phosphosulfate
carbon monoxide
xanthine
(E)-glutaconate
(2R,3S)-2,3-dimethylmalate
oxaloacetate
cis-coumarinic acid-β-D-glucoside
scopolin
(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate
4-hydroxybenzaldehyde
4-methylumbelliferyl glucoside
4-prenylphlorisobutyrophenone
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
hydrogen selenide
O-acetyl-L-serine
preuroporphyrinogen
D-gluconate 6-phosphate
(2S)-lactyl-2-diphospho-5'-guanosine
2,3-didehydroadipyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
(E)-4-coumaroyl-CoA
2-oleoylglycerol
diethylthiophosphate
(S)-2,3,4,5-tetrahydrodipicolinate
dimethylthiophosphate
diethylphosphate
N-succinyl-L,L-2,6-diaminopimelate
N-succinyl-2-amino-6-ketopimelate
prenyl diphosphate
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
isopentenyl diphosphate
phosphoenolpyruvate
α-D-galactosyl-diphosphoundecaprenol
α-D-glucosamine 1-phosphate
7,8-didemethyl-8-hydroxy-5-deazariboflavin
oxalate
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
3'-phosphoadenylyl-sulfate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
hydrogen peroxide
prephenate
CO2
methylamine
N-ethylglycine
ethylamine
H2O
2-iminoacetate
N-acetyl-L-glutamate 5-semialdehyde
orotidine 5'-phosphate
glycerone phosphate
5-phospho-β-D-ribosylamine
N1-(5-phospho-β-D-ribosyl)glycinamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
DNA without lesion
2-dehydro-3-deoxy-D-gluconate 6-phosphate
N2-succinyl-L-glutamate 5-semialdehyde
N2-succinylglutamate
4-acetamidobutanal
4-acetamidobutanoate
chlorite
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA
acrylamide
acrylate
4-guanidinobutyramide
4-guanidinobutanoate
(indol-3-yl)acetamide
propionamide
H2
carbonic acid
presqualene diphosphate
prephytoene diphosphate
squalene
hop-22(29)-ene
4-amino-4-deoxychorismate
nigerose
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
2-carboxy-L-threo-pentonate
3-methoxy-4-hydroxyphenylglycolaldehyde
2-carboxy-L-xylonolactone
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
2,3-dioxo-L-gulonate
cyclic- 3,4-O-oxalyl-L-threonate
indole-3-glycol
indole-3-glycol aldehyde
isobutanol
3-methylbutanol
3-methylbutanal
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
2-methylbutanol
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
2-methylbutanal
5-hydroxyindole thiazolidine carboxylate
bisorganyltrisulfane
2-phenylethanol
dehydroascorbate (bicyclic form)
cyclic-2,3-O-oxalyl-L-threonate
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
1,6-anhydro-N-acetyl-β-muramate
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
4-phosphooxy-L-threonine
5-deoxy-α-ribose 1-phosphate
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
quinolinate
(R)-pantothenate
5-aminolevulinate
porphobilinogen
(S)-4-amino-5-oxopentanoate
acetoacetate
acetyl phosphate
N-acetyl-D-galactosamine 6-phosphate
D-galactosamine-6-phosphate
urea
urea-1-carboxylate
L-gulono-1,4-lactone
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-aceto-2-hydroxybutanoate
(S)-2-acetolactate
3-phosphooxypyruvate
(2S)-2-isopropyl-3-oxosuccinate
3-ethylmalate
2-oxovalerate
4-methyl-2-oxopentanoate
(S)-3-methyl-2-oxopentanoate
γ-L-glutamyl 5-phosphate
betaine aldehyde
glycine betaine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
2-iminopropanoate
2-aminoprop-2-enoate
(2Z)-2-aminobut-2-enoate
acetamide
phosphoribulosylformimino-AICAR-phosphate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
nicotinamide
DNA with lesion
phenylacetate
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
9α-hydroxyandrosta-1,4-diene-3,17-dione
androst-4-ene-3,17-dione
androsta-1,4-diene-3,17-dione
(indol-3-yl)acetate
cobalt-factor III
cobalt-precorrin-3
cobalt-sirohydrochlorin
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-5B
cobalt-precorrin-6A
cobalt-precorrin-4
cobalt-precorrin-5A
131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester
3,8-divinyl protochlorophyllide a
magnesium-protoporphyrin IX 13-monomethyl ester
131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester
chlorophyllide a
protochlorophyllide a
adenosylcobalamin
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
adenosylcobinamide
adenosyl-cobinamide phosphate
adenosylcobyrate
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)inamide
cob(I)alamin
Mg-protoporphyrin
cob(II)yrinate c-monoamide
cob(II)yrinate a,c-diamide
cobyrinate
protoheme
hydrogen cyanide
monodehydroascorbate radical
hydroxyl radical
superoxide
D-glucono-1,5-lactone
L-galactono-1,4-lactone
trans-dienelactone
cis-dienelactone
2-methylbutanoyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
2-trans, 4-trans-undecadienoyl-CoA
2-trans, 4-cis-undecadienoyl-CoA
(3E)-undec-3-enoyl-CoA
(2E,4E)-tetradeca-2,4-dienoyl-CoA
(3E)-tetradec-3-enoyl-CoA
3'-dephospho-CoA
(R)-2-hydroxyglutaryl-CoA
(E)-glutaconyl-CoA
3-hydroxyisovaleryl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
(E)-2-methylcrotonoyl-CoA
(3S)-hydroxyadipyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
methylacrylyl-CoA
succinyl-CoA
isobutanoyl-CoA
acetyl-CoA
phenylacetyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
2-methylacetoacetyl-CoA
(R)-methylmalonyl-CoA
(S)-methylmalonyl-CoA
crotonyl-CoA
trans-Δ2, cis-Δ4-decadienoyl-CoA
(2E)-oct-2-enoyl-CoA
(2E)-dec-2-enoyl-CoA
phytanoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
cerotoyl-CoA
2-carboxy-cerotoyl-CoA
propanoyl-CoA
butanoyl-CoA
2-hydroxyphytanoyl-CoA
3-oxoadipyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
3-oxooctanoyl-CoA
3-oxohexanoyl-CoA
3-oxodecanoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
FMN
FAD
FMNH2
FADH2
(S)-NADHX
(R)-NADHX
NADH
NADPH
NAD+
NADP+
caldariellaquinol
ubiquinol-8
menaquinol-8
menaquinol-7
menaquinol-9
menaquinol-6
menaquinol-10
menaquinol-11
menaquinol-12
menaquinol-13
demethylmenaquinol-8
demethylmenaquinol-7
demethylmenaquinol-9
demethylmenaquinol-6
demethylmenaquinol-10
demethylmenaquinol-11
demethylmenaquinol-12
demethylmenaquinol-13
3-demethylubiquinol-8
caldariellaquinone
parathion
paraoxon
4-nitrophenol
molybdopterin
coenzyme A
oxidized coenzyme F420-0
MoO2-molybdopterin cofactor
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
7,8-dihydrofolate monoglutamate
N10-formyldihydrofolate
nicotinate
L-ascorbate
riboflavin
pyridoxine
pyridoxal
pyridoxamine
pyridoxine 5'-phosphate
pyridoxamine 5'-phosphate
pyridoxal 5'-phosphate
menadione
dimethyl sulfide
methionol
S-(hydroxymethyl)glutathione
3-(methylsulfanyl)propanal
glutathione
thiocyanate
S-sulfanylglutathione
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
L-cysteate
3-sulfopyruvate
(S)-1-pyrroline-5-carboxylate
precorrin-1
precorrin-2
sirohydrochlorin
6,7-dimethyl-8-(1-D-ribityl)lumazine
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
molybdopterin adenine dinucleotide
6-(hydroxymethyl)-7,8-dihydropterin
7,8-dihydroneopterin 3'-triphosphate
cyclic pyranopterin phosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydroneopterin 2',3'-cyclic phosphate
7,8-dihydropteroate
adenine
guanine
2'-deoxyguanosine
2'-deoxyadenosine
2'-deoxyinosine
xanthosine
guanosine
inosine
adenosine
hypoxanthine
dGMP
dAMP
dIMP
dGTP
dATP
dITP
dGDP
dADP
dIDP
GDP
ADP
IDP
GMP
IMP
AMP
XMP
ITP
GTP
ATP
XTP
uracil
dUDP
dCDP
CDP
dTTP
dUMP
dCMP
UDP
dTMP
dTDP
UTP
dCTP
dUTP
orotate
CTP
UDP-α-D-galacturonate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-α-D-galactofuranose
UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
UDP-α-D-galactose
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-α-D-sulfoquinovopyranose
UDP-N-acetyl-α-D-mannosamine
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
dTDP-α-D-glucose
dTDP-β-L-rhamnose
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
dTDP-4-dehydro-β-L-rhamnose
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
CMP
UMP
isoguanine
scopoletin
coumarin
4-methylumbelliferone
selenite
sulfate
perchlorate
molybdate
selenate
thiosulfate
nitrate
hydrogencarbonate
sulfite
nitrite
selenide
OH-
hydrogensulfite
phosphate
triphosphate
diphosphate
chloride
Fe3+
H+
Na+
ammonium
Co2+
Fe2+
Hg2+
Mg2+
trimethyl sulfonium
acrylonitrile
neolinustatin
lotaustralin
linustatin
linamarin
taxiphyllin
(indole-3-yl)acetonitrile
2-hydroxy-2-methylpropanenitrile
(2R)-2-hydroxy-2-methylbutanenitrile
salicylaldehyde
actinorhodin intermediate
actinorhodin
benzene
4-hydroxybenzoate
urate
4-tyrosol
protocatechuate
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
3-methoxy-4-hydroxyphenylglycol
amino-parathion
methyl parathion
benzaldehyde
(4-hydroxyphenyl)acetaldehyde
phenylacetaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
menadiol
6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
4-aminophenol
4-methylphenol
coumarinate
salicylate
benzoate
4-aminobenzoate
chorismate
succinate
fumarate
L-aspartate
(S)-malate
(2R,3S)-2-methylisocitrate
(3E,5R)-5-carboxy-2-oxohept-3-enedioate
3-carboxy-cis,cis-muconate
cis-aconitate
cis-2-methylaconitate
(2S,3S)-2-methylcitrate
D-threo-isocitrate
(S)-lactate
(R)-lactate
(R)-2-hydroxyglutarate
propanoate
formate
pyruvate
acetate
butanoate
octanoate
(R)-pantoate
D-gluconate
aldehydo-D-galacturonate
aldehydo-D-glucuronate
3-oxoadipate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
2-oxobutanoate
glyoxylate
2-oxoglutarate
apo-4'-lycopenoate
phytenate
L-α-amino-ε-keto-pimelate
L-cysteine
L-tyrosine
L-threonine
L-glutamine
L-serine
glycine
L-arginine
L-histidine
L-lysine
L-glutamate
L-tryptophan
L-phenylalanine
D-aspartate
D-glutamate
D-alanine
S-sulfanyl-L-cysteine
seleno-L-homocysteine
L-selenomethionine
L-aspartyl-4-phosphate
sarcosine
N-acetyl-L-ornithine
N-acetyl-L-methionine
N-acetyl-L-glutamate
N-carbamoyl-L-aspartate
3-phospho-L-serine
L-citrulline
L-ornithine
L-homoserine
L-cystine
S-sulfo-L-cysteine
L-homocysteine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-aspartate 4-semialdehyde
L-4-hydroxyglutamate semialdehyde
O-phospho-L-homoserine
L-glutamate-5-semialdehyde
O-succinyl-L-homoserine
meso-diaminopimelate
L-selenocysteine
L-methionine
L-isoleucine
L-alanine
L-proline
L-valine
L-leucine
L-cystathionine
L,L-diaminopimelate
β-alanine
(S)-3-amino-2-methylpropanoate
methylglyoxal
diacetyl
acetone
6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone
3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone
glycolaldehyde
butan-1-al
formaldehyde
acetaldehyde
1-octanal
1-propanal
isobutanal
phytenal
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
aldehydo-D-mannose
β-D-mannopyranose
β-D-galactopyranose
α-D-galactopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
butan-1-ol
methanol
ethanol
propan-1-ol
phytol
D-mannitol
myo-inositol
scyllo-inosose
1D-myo-inositol 2-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 3-monophosphate
(3R)-linalool
(3S)-linalool
1-oleoyl-sn-glycerol 3-phosphate
mono-trans,octa-cis-decaprenyl diphosphate
trans,octacis-decaprenyl phosphate
(2E,6E)-farnesyl diphosphate
phytyl diphosphate
apo-4'-lycopenal
15-cis-phytoene
all-trans-phytoene
geranyl diphosphate
3-octaprenyl-4-hydroxybenzoate
di-trans,octa-cis-undecaprenyl phosphate
all-trans-undecaprenyl diphosphate
all-trans-decaprenyl diphosphate
all-trans-octaprenyl diphosphate
geranylgeranyl diphosphate
all-trans-heptaprenyl diphosphate
2-cis,6-trans,10-trans-geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
5-deoxy-dihydrokalafungin
(S)-DNPA
2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate
(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate
4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate
phlorisovalerophenone
dihydrokalafungin
deoxyhumulone
4-prenylphlorisovalerophenone
deoxycohumulone
vanillylamine
maltotriose
maltotetraose
maltohexaose
maltopentaose
maltoheptaose
sucrose
α,α-trehalose
β-D-cellobiose
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetylmuramate
N-acetyl-β-D-glucosamine
N-acetyl-α-D-glucosamine 1-phosphate
keto-D-fructose
β-D-fructofuranose
D-xylulose
D-ribulose
L-ribulose
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
a peptidoglycan dimer (mycobacteria)
a peptidoglycan dimer (E. faeciums)
a peptidoglycan dimer (E. faecium, tetrapeptide)
a peptidoglycan dimer (S. aureus)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
sucrose 6F-phosphate
α,α-trehalose 6-phosphate
ADP-α-D-glucose
GDP-α-D-mannose
GDP-4-dehydro-α-D-rhamnose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
4-phospho-D-erythronate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-erythrose 4-phosphate
D-sedoheptulose 7-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
β-D-glucose 6-phosphate
α-D-glucose 6-phosphate
D-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
D-ribulose 5-phosphate
L-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
α-D-ribose-1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
aldehydo-L-galactonate
L-gulonate
5'-deoxyadenosine
1-(5-phospho-β-D-ribosyl)-AMP
1-(5-phospho-β-D-ribosyl)-ATP
pppGpp
ppGpp
adenylo-succinate
8-oxo-GTP
8-oxo-dGTP
2-hydroxy-dATP
5-hydroxy-CTP
5-hydroxy-CMP
reduced β-nicotinamide D-ribonucleotide
β-nicotinamide D-ribonucleotide
cyclic di-3',5'-guanylate
2-iminobutanoate
2-iminosuccinate
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
D-alanyl-D-alanine
uroporphyrinogen-I
coproporphyrinogen I
protoporphyrin IX
uroporphyrinogen-III
protoporphyrinogen IX
hydrogen sulfide
Hg0
oxygen
S0
sn-glycerol 3-phosphate
sn-glycerol 1-phosphate
3-phospho-D-glyceroyl-phosphate
2,3-diphospho-D-glycerate
3-phospho-D-glycerate
2-phospho-D-glycerate
(2S)-2-phospholactate
(2R)-2,3-dihydroxy-3-methylbutanoate
α-D-glucosamine 6-phosphate
(S)-methylmalonate-semialdehyde
(R)-methylmalonate-semialdehyde
5,10-methenyltetrahydrofolate mono-L-glutamate
3-(all-trans-octaprenyl)benzene-1,2-diol
(S)-3-hydroxy-isobutanoate
2-octaprenylphenol
2-methoxy-6-(all-trans-octaprenyl)phenol