an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

phosphoenolpyruvate

histidinol

histidinal

H₂O

L-histidinol phosphate

imidazole acetol-phosphate

4-amino-4-deoxychorismate

CO₂

N-acetylglutamyl-phosphate

hydrogen peroxide

6-amino-2-oxohexanoate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

porphobilinogen

5-aminolevulinate

3-oxopropanoate

4-hydroxy-2-nonenal

3'-phosphoadenylyl-sulfate

succinate semialdehyde

4-aminobutanoate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinylglutamate

4-methyl-3-oxoadipate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-dehydroshikimate

3-dehydroquinate

L-quinate

shikimate

acetoacetate

D-glucurono-6,3-lactone

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

4-imidazoleacetate

imidazole acetaldehyde

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

propynoate

prop-2-ynal

3,4-dihydroxyphenylacetaldehyde

arsenite

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

(2-hydroxyphenyl)acetate

homogentisate

carbonic acid

N-succinyl-L,L-2,6-diaminopimelate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

glycerone phosphate

oxaloacetate

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

4-methyl-2-oxopentanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(S)-dihydroorotate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

3-phosphooxypyruvate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

formamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

coproporphyrinogen III

3-amino-1-hydroxyacetone 1-phosphate

DNA without lesion

γ-L-glutamyl 5-phosphate

propane-1,3-diamine

2-dehydropantoate

pseudouridine 5'-phosphate

glutathione disulfide

N¹-(5-phospho-β-D-ribosyl)glycinamide

glycolate

citrate

3-deoxy-D-arabino-heptulosonate 7-phosphate

lipid A disaccharide (E. coli)

lipid X

β-D-fructose 2,6-bisphosphate

S-formylglutathione

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

D-gluconate 6-phosphate

O-acetyl-L-serine

hydrogen selenide

urea-1-carboxylate

urea

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

muconolactone

cis,cis-muconate

(+)-muconolactone

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

propionamide

acrylate

acrylamide

5-enolpyruvoyl-shikimate 3-phosphate

5-phospho-β-D-ribosylamine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

α-ribazole 5'-phosphate

α-ribazole

β-nicotinate D-ribonucleotide

5,6-dimethylbenzimidazole

ammonia

2-keto-D-gluconate

dethiobiotin

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

carbamoyl phosphate

shikimate 3-phosphate

prephenate

anthranilate

N-(5-phosphoribosyl)-anthranilate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

ethanolamine

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

chloramphenicol

itaconate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

4'-phosphopantetheine

(S)-4-amino-5-oxopentanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

2-phenylethanol

3-methylbutanal

3-methylbutanol

isobutanol

2-methylbutanal

2-methylbutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxytryptophol

isopentenyl diphosphate

4-pyridoxolactone

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

(S)-2-amino-6-oxohexanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

γ-butyrobetaine

benzoylsuccinyl-CoA

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

5-amino-6-(D-ribitylamino)uracil

L-canavanine

preuroporphyrinogen

2-phosphoglycolate

hydroxypyruvate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

oxalosuccinate

coniferaldehyde

3-methyl-2-oxobutanoate

acetyl phosphate

tartronate semialdehyde

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(R)-pantothenate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

orotidine 5'-phosphate

lipid IV_A

prenyl diphosphate

trans-O-hydroxybenzylidenepyruvate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

N-acetyl-L-glutamate 5-semialdehyde

2-C-methyl-D-erythritol 4-phosphate

D-erythro-imidazole-glycerol-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

L-selenocystathionine

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

xanthine

α-D-glucosamine 1-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-maleylacetate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

quinolinate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

glutathionylspermidine

salicyl alcohol

methylsalicylate

gallate

digallate

vanillin

nicotinate adenine dinucleotide

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

dialurate

6-phospho D-glucono-1,5-lactone

H₂

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(R)-1-amino-2-propanol O-2-phosphate

mesaconate

(2S)-2-isopropyl-3-oxosuccinate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

pseudouridine

glutathioselenol

selenodiglutathione

autoinducer 2

S-ribosyl-L-homocysteine

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

L-dehydro-ascorbate

(4-hydroxyphenyl)acetate

5-aminopentanoate

1-piperideine 6-carboxylate

1-piperideine-2-carboxylate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(2E,6E)-farnesyl diphosphate

(2E,6E)-farnesol

pristanate

riboflavin

nicotinate

nicotinamide

thiamine

L-ascorbate

menadione

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

all-trans-retinol

pyridoxine 5'-phosphate

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine

4-pyridoxate

L-carnitine

FMN

FMNH₂

FADH₂

FAD

NADH

NADPH

NAD⁺

NADP⁺

3-demethylubiquinol-8

menaquinol-8

ubiquinol-8

demethylmenaquinol-8

(R)-NADHX

(S)-NADHX

glycine betaine

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

hydrogen cyanide

(indole-3-yl)acetonitrile

preQ₀

acrylonitrile

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

nitric oxide

superoxide

hydroxyl radical

monodehydroascorbate radical

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-citramalate

1-oleoyl-2-lyso-glycerone phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

oxygen

hydrogen sulfide

protoporphyrinogen IX

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

siroheme

protoheme

N₂

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobalamin

cobyrinate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(I)alamin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobyrate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

ethylphosphate

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-homocysteine

4-methylphenol

L-glutamine

L-alanine

glycine

L-serine

L-proline

L-leucine

L-histidine

L-arginine

L-lysine

L-glutamate

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

L-citrulline

L-valine

L-isoleucine

L-tyrosine

L-aspartate

L-phenylalanine

L-asparagine

L-tryptophan

L-threonine

L-methionine

L-cysteine

L-ornithine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

L-canaline

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

L-selenocysteine

L,L-diaminopimelate

L-2,4-diaminobutanoate

L-cystathionine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

seleno-L-homocysteine

3-phospho-L-serine

O-acetyl-L-homoserine

sarcosine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

(2S, 3S)-3-methylaspartate

D-alanine

D-lysine

ATP

1-(5-phospho-β-D-ribosyl)-ATP

ADP

GMP

XMP

GTP

GDP

IDP

ITP

adenylo-succinate

5'-deoxyadenosine

2'-deoxyguanosine

dGTP

IMP

2'-deoxyinosine

2'-deoxyadenosine

dADP

dGDP

1-(5-phospho-β-D-ribosyl)-AMP

dIMP

dITP

XTP

ppGpp

pppGpp

cyclic-AMP

hypoxanthine

dIDP

dATP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

AMP

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP-3-deoxy-β-D-manno-octulosonate

adenosine

inosine

guanosine

xanthosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

preQ₁

adenine

guanine

uracil

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

dTDP

dCDP

dUDP

dUTP

dCTP

dTTP

dUMP

dTMP

dCMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UMP

CMP

UDP

CDP

UTP

CTP

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

precorrin-2

precorrin-1

sirohydrochlorin

orotate

(S)-1-pyrroline-5-carboxylate

(+)-dihydromyricetin

(+)-taxifolin

(+)-dihydrokaempferol

(2R,3S,4S)-leucodelphinidin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

2-hydroxychromene-2-carboxylate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

salicylaldehyde

menadiol

2,5-dichloro-p-quinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

protocatechuate

salicylate

vanillate

2,3-dihydroxybenzoate

4-aminobenzoate

benzoate

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

ferulate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

catechol

3,4-dihydroxyphenylglycol

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

apo-4'-lycopenal

zeinoxanthin

apo-4'-lycopenoate

α-carotene

all-trans-retinyl palmitate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

dioleoyl phosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dodecyl icosanoate

malonyl-CoA

acetyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-hydroxybenzoyl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

itaconyl-CoA

3'-dephospho-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

2-methylacetoacetyl-CoA

dihomo γ-linolenoyl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

crotonobetainyl-CoA

phenylacetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

cerotoyl-CoA

pristanoyl-CoA

icosanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

hexadecanedioyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-palmitoyl-CoA

(S)-malyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

D-gluconate

aldehydo-L-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

aldehydo-D-galacturonate

sucrose

α,α-trehalose

glycolaldehyde

L-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-fructofuranose

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

glycerol

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

a coenzyme-A group

2,5-dichloro-p-quinone

methylglyoxal

diacetyl

(2E,6E)-farnesal

3-(N-morpholino)propanal

(S)-lactaldehyde

acetaldehyde

1-octanal

isobutanal

1-propanal

formaldehyde

butan-1-al

phytenal

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

cis-aconitate

(2R)-homocitrate

cis-homoaconitate

D-threo-isocitrate

2-oxoglutarate

pyruvate

glyoxylate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

3-oxoadipate

octanoate

decanoate

(2E,6E)-farnesoate

acetate

formate

propanoate

butanoate

(S)-lactate

(R)-lactate

(R)-3-hydroxybutanoate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

aldehydo-D-glucuronate

oleate

palmitate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

(3E,5Z)-tetradecadienoate

stearate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

acetamide

estrone

ethene

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3-β-hydroxyandrost-5-en-17-one

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,5-cyclohexadiene-1,2-diol-1-carboxylate

myo-inositol

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 3-monophosphate

1-dodecanol

1-octanol

ethanol

phytol

propan-1-ol

butan-1-ol

methanol

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

betaine aldehyde

choline

betaine aldehyde hydrate

spermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

3-dimethylsulfoniopropionaldehyde

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

methanesulfonate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

(R)-S-lactoylglutathione

Fe³⁺

Zn²⁺

Fe²⁺

Co²⁺

K⁺

H⁺

ammonium

molybdate

sulfite

thiosulfate

hydrogencarbonate

selenate

nitrite

hydrogensulfite

OH^-

trithionate

nitrate

selenite

sulfate

chloride

phosphate

diphosphate

triphosphate

trimethyl sulfonium