an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

phosphoenolpyruvate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

CO₂

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

N-acetyl-D-muramate 6-phosphate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3-dehydroshikimate

shikimate

5-enolpyruvoyl-shikimate 3-phosphate

xanthine

oxaloacetate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

α-D-glucopyranosyl-diphosphoundecaprenol

(S)-2-amino-6-oxohexanoate

nicotinate adenine dinucleotide

L-histidinol phosphate

imidazole acetol-phosphate

histidinol

histidinal

enol-phenylpyruvate

(S)-dihydroorotate

prephenate

(lipoyl)adenylate

lipoamide

dihydrolipoamide

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

2-isopropylmaleate

glycerone phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

2-C-methyl-D-erythritol 4-phosphate

β-nicotinate D-ribonucleotide

1,4-dihydroxy-2-naphthoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

lipid IV_A

lipid A disaccharide (E. coli)

thiamine diphosphate

thiamine phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

nigerose

N-acetylglutamyl-phosphate

4-guanidinobutyramide

shikimate 3-phosphate

butanoyl phosphate

4-amino-4-deoxychorismate

3'-phosphoadenylyl-sulfate

D-erythro-imidazole-glycerol-phosphate

2-dehydro-3-deoxy-D-gluconate

4'-phosphopantetheine

isopentenyl diphosphate

2-dehydropantoate

chloramphenicol

preuroporphyrinogen

estrone 3-sulfate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

quinolinate

hydrogen peroxide

3-deoxy-D-glycero-2,5-hexodiulosonate

5-dehydro-D-gluconate

4-methylumbelliferyl glucoside

cis-coumarinic acid-β-D-glucoside

4-hydroxybenzaldehyde

scopolin

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

O-acetyl-L-serine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

coenzyme F₃₉₀-A

4-pyridoxolactone

autoinducer 2

S-ribosyl-L-homocysteine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

3-dehydroquinate

orotidine 5'-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

3-keto-β-D-galactose

2-phenylethanol

3-methylbutanal

3-methylbutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

isobutanol

2-methylbutanal

2-methylbutanol

indole-3-glycol aldehyde

indole-3-glycol

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

2,5-didehydro-D-gluconate

2-keto-D-gluconate

O-ureido-L-homoserine

N-acetyl-L-glutamate 5-semialdehyde

γ-L-glutamyl 5-phosphate

carbamoyl phosphate

lipid X

acetyl phosphate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

4-aminobutanoate

hydroxypyruvate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

anthranilate

N-(5-phosphoribosyl)-anthranilate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

coproporphyrinogen III

(L-threonylcarbamoyl)adenylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

DNA without lesion

prenyl diphosphate

β-D-ribosylnicotinate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

hydroxylamine

(R)-pantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

2-oleoylglycerol

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

hydrogen selenide

glutathionylspermidine

carbon monoxide

2-iminoacetate

norspermidine

carboxynorspermidine

3-phosphonopyruvate

H₂

glutathione disulfide

3-deoxy-α-D-manno-2-octulosonate

urea

3-phosphooxypyruvate

3-ureidopropanoate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

α-ribazole

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

glycolate

2-phosphoglycolate

oxalosuccinate

citrate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-methylcytosine

β-D-fructose 2,6-bisphosphate

glutarate

(7R)-7-(4-carboxybutanamido)cephalosporanate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

carbonic acid

urocanate

4-imidazolone-5-propanoate

3-deoxy-D-manno-octulosonate 8-phosphate

7-carboxy-7-deazaguanine

acetoacetate

2-(α-hydroxyethyl)thiamine diphosphate

formamide

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

glutathioselenol

selenodiglutathione

(R)-1-amino-2-propanol O-2-phosphate

dialurate

4-amino-2-methyl-5-pyrimidinemethanol

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

pimelate

1,6-anhydro-N-acetyl-β-muramate

α-D-glucosamine 1-phosphate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate

2-keto-L-gulonate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

1-(methylsulfanyl)xylulose 5-phosphate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-amino-3-carboxymuconate-6-semialdehyde

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

ammonia

pyruvic oxime

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

aminoacetone

1-piperideine 6-carboxylate

4-oxoglutaramate

5-hydroxyindole thiazolidine carboxylate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

L-α-amino-ε-keto-pimelate

L-citrulline

L-methionine

L-cysteine

L-valine

L-aspartate

L-threonine

L-serine

L-alanine

L-glutamate

L-glutamine

L-histidine

L-phenylalanine

L-asparagine

L-arginine

glycine

L-lysine

L-tyrosine

L-leucine

L-proline

L-tryptophan

L-isoleucine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-homoserine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-canaline

L-ornithine

L-allo-threonine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-aspartyl-4-phosphate

L,L-diaminopimelate

L-cystathionine

L-isoglutamine

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-carbamoyl-L-aspartate

L-saccharopine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

N-acetyl-L-glutamate

3-phospho-L-serine

D-glutamate

D-alanine

D-aspartate

β-alanine

(R)-3-amino-2-methylpropanoate

L-threo-3-phenylserine

AMP

GDP

GTP

ADP

ATP

GMP

hypoxanthine

IMP

XMP

1-(5-phospho-β-D-ribosyl)-ATP

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

adenylo-succinate

5'-deoxyadenosine

cyclic-AMP

2'-deoxyguanosine

dGTP

IDP

ITP

dADP

dATP

dGDP

dITP

dIDP

ppGpp

pppGpp

2'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyinosine

dGMP

dAMP

1-(5-phospho-β-D-ribosyl)-AMP

guanine

adenine

uracil

thymine

cytosine

preQ₁

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dCDP

dUDP

dTDP

dTTP

dUTP

dCTP

dUMP

dCMP

dTMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

UMP

CMP

UDP

CDP

UTP

CTP

NADH

NADPH

NAD⁺

NADP⁺

cytidine-3'-monophosphate

uridine 3'-monophosphate

5,6-dihydrouracil

5,6-dihydrothymine

UDP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

cyclic ADP-ribose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-tyvelose

CDP-α-D-paratose

CDP-4-dehydro-6-deoxy-α-D-glucose

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

5-fluorouracil

adenosine

inosine

guanosine

xanthosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

cytidine

uridine

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

orotate

(S)-1-pyrroline-5-carboxylate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

cyclic pyranopterin phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

FADH₂

FMNH₂

FAD

riboflavin

FMN

precorrin-4

precorrin-3B

precorrin-5

precorrin-2

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

cobyrinate

sirohydrochlorin

adenosylcobalamin

cob(I)alamin

scopoletin

coumarin

4-methylumbelliferone

chloramphenicol 3-acetate

4-tyrosol

urate

4-hydroxybenzoate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

protocatechuate

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

3-demethylubiquinol-8

menaquinol-8

ubiquinol-8

demethylmenaquinol-8

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

4-methylphenol

4-aminobenzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

coumarinate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

3-methoxy-4-hydroxyphenylglycol

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

cephalosporin C

(7R)-7 aminocephalosporanate

deacetylcephalosporin C

L-galactono-1,4-lactone

malonyl-CoA

acetyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

succinyl-CoA

3'-dephospho-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

phytenoyl-CoA

oleoyl-CoA

decanoyl-CoA

octanoyl-CoA

cerotoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

propanoyl-CoA

butanoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

acetoacetyl-CoA

(S)-malyl-CoA

D-mannonate

D-gluconate

D-altronate

L-idonate

aldehydo-L-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

XXXG xyloglucan oligosaccharide

β-D-cellobiose

unsaturated gellan tetrasaccharide

allolactose

sucrose

melibiose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

isoprimeverose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate

α-lactose

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

stachyose

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

α-D-xylopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

β-L-rhamnopyranose

α-L-rhamnopyranose

D-glyceraldehyde

glycolaldehyde

D-xylulose

L-ribulose

keto-D-fructose

β-D-fructofuranose

L-fuculose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-neuraminate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-galactosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

glycerol

L-iditol

D-sorbitol

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

1-O-acetyl-α-maltose

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-rhamnulose 1-phosphate

L-fuculose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

sucrose 6^F-phosphate

aldehydo-D-galacturonate

(R)-lactaldehyde

(S)-lactaldehyde

isobutanal

1-propanal

acetaldehyde

butan-1-al

formaldehyde

phytenal

methylglyoxal

diacetyl

5-chloro-5-deoxy-D-ribonate

acetate

(R)-pantoate

D-tagaturonate

aldehydo-D-glucuronate

pristanate

palmitate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

(15Z)-tetracosenoate

phytenate

sophorosyloxydocosanoate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

decanoate

octanoate

butanoate

pyruvate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxoglutarate

glyoxylate

3-phenyl-2-oxopropanoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-glycerate

3-(carbamoylamino)-2-methylpropanoate

chorismate

fumarate

succinate

(S)-malate

(2S,3S)-2-methylcitrate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

nicotinamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

testosterone

17-β-hydroxy-5-α-androstan-3-one

estrone

progesterone

phenylacetate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

5-α-pregnane-3,20-dione

cortisone

4,5α-dihydrocortisone

cholest-4-en-3-one

coprostanone

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

ethylene glycol

(R)-propane-1,2-diol

(S)-propane-1,2-diol

myo-inositol

phytate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

1D-myo-inositol 3-monophosphate

ethanol

phytol

propan-1-ol

butan-1-ol

glycine betaine

choline

choline sulfate

agmatine

cadaverine

putrescine

spermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

3-(methylsulfanyl)propanal

methionol

dimethyl sulfide

methanethiol

glutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

N-acetyl-D-galactosamine 6-O-sulfate

(R)-S-lactoylglutathione

sulfate

hydrogencarbonate

sulfite

thiosulfate

superoxide

selenate

molybdate

selenite

hydrogensulfite

phosphate

diphosphate

triphosphate

Fe³⁺

Cd²⁺

Zn²⁺

Mg²⁺

Fe²⁺

Co²⁺

H⁺

ammonium

K⁺

trimethyl sulfonium

thiamine

nicotinate

L-ascorbate

pyridoxal

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxine

(S)-NADHX

(R)-NADHX

coenzyme A

(R)-lipoate

oxidized coenzyme F₄₂₀-2

hydrogen cyanide

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

2-iminobutanoate

2-iminosuccinate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

monodehydroascorbate radical

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

uroporphyrinogen-III

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

cobalt-sirohydrochlorin

cobalt-factor III

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

DNA with lesion