ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C2354

α-D-glucopyranosyl-diphosphoundecaprenol

C4676

glutathionylspermidine

C1371

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

C1367

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

C13759

7-α,12-α-dihydroxy-3-oxochol-4-enoate

C13758

12-α-hydroxy-3 oxochola-4,6-dienoate

C12390

D-erythro-imidazole-glycerol-phosphate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C1078

(S)-2-amino-6-oxohexanoate

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C12254

ethanolamine

C12325

1,4-dihydroxy-2-naphthoate

C1305

4-fumaryl-acetoacetate

C6361

acetoacetate

C7865

urea

C12230

formamide

C1325

4-amino-4-deoxychorismate

C15056

salicyl alcohol

C2580

methylsalicylate

C4883

2-oleoylglycerol

C13627

DNA without lesion

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C15215

(L-threonylcarbamoyl)adenylate

C12096

isochorismate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C13257

carboxynorspermidine

C11849

norspermidine

C1440

nigerose

C1445

adenosine 3',5'-bisphosphate

C873

coproporphyrinogen III

C927

carbon monoxide

C352

2-iminoacetate

C11826

oxalosuccinate

C891

citrate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C12218

α-D-glucosamine 1-phosphate

C11800

(R)-pantothenate

C8364

indole-3-ethanol

C12352

(S)-dihydroorotate

C13913

N-carbamoylputrescine

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C3482

dihydroxyacetone

C14184

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

C13909

CDP-glycerol

C1268

(R)-4'-phosphopantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1528

2-dehydropantoate

C12048

γ-L-glutamyl 5-phosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C949

lipid X

C1353

3-phosphooxypyruvate

C12178

histidinal

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C12176

histidinol

C11838

2-succinylbenzoate

C939

butanoyl phosphate

C1108

acetyl phosphate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C9422

nicotinate adenine dinucleotide

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C15207

(2S,5S)-hexanediol

C15208

2,5-hexanedione

C3295

2-keto-D-gluconate

C1454

2,5-didehydro-D-gluconate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C142

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

C933

L-canavanine

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C7349

chloramphenicol

C11748

pseudouridine 5'-phosphate

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C11802

4'-phosphopantetheine

C13798

2-phenylethanol

C13799

2-methylbutanol

C11976

2-methylbutanal

C13800

3-methylbutanol

C13801

3-methylbutanal

C12102

isobutanol

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C12162

hydrogen peroxide

C1208

5-dehydro-D-gluconate

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C10794

lipid A disaccharide (E. coli)

C6099

lipid IVA

C11539

xanthine

C11606

thiamine phosphate

C11604

thiamine diphosphate

C14145

3-deoxy-D-glycero-2,5-hexodiulosonate

C10349

glycerone phosphate

C15306

2,3-didehydroadipyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C13950

pimeloyl-CoA

C1130

8-amino-7-oxononanoate

C12350

7,8-diaminopelargonate

C12355

dethiobiotin

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C12192

carbonic acid

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C13738

cis-coumarinic acid-β-D-glucoside

C11662

scopolin

C1297

4-hydroxybenzaldehyde

C451

4-methylumbelliferyl glucoside

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C11760

prephenate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C191

L-selenocystathionine

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C5991

3-keto-β-D-galactose

C13635

β-D-ribosylnicotinate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12492

1,6-anhydro-N-acetyl-β-muramate

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C11794

3'-phosphoadenylyl-sulfate

C11653

shikimate

C11930

N-acetylglutamyl-phosphate

C13768

all-trans-13,14-dihydroretinol

C6444

oxaloacetate

C11493

2-phosphoglycolate

C11483

glycolate

C3262

3-methyl-2-oxobutanoate

C3319

4-methyl-2-oxopentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11857

β-nicotinate D-ribonucleotide

C11715

quinolinate

C11832

orotidine 5'-phosphate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11479

phosphoenolpyruvate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C3850

5-amino-6-(D-ribitylamino)uracil

C1184

5-phospho-β-D-ribosylamine

C928

CO2

C2191

carbamoyl phosphate

C3344

2-dehydro-3-deoxy-D-gluconate

C11543

H2O

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C12274

enol-phenylpyruvate

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C446

5-hydroxyindole thiazolidine carboxylate

C1010

ammonia

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C1271

4-oxoglutaramate

C13702

1-piperideine 6-carboxylate

C12054

L-dehydro-ascorbate

C13983

α-D-galacturonate 1-phosphate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C4690

selenodiglutathione

C4688

glutathioselenol

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C13986

pseudouridine

C3255

2-keto-L-gulonate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C335

7-epicholate

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C6574

(S)-ureidoglycolate

C12848

N5-carboxyaminoimidazole ribonucleotide

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C4674

glutathione disulfide

C1285

4-imidazolone-5-propanoate

C11557

urocanate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C3656

D-gluconate 6-phosphate

C4198

deoxycholoyl-CoA

C10512

12α-hydroxy-3-oxocholan-24-oyl-CoA

C1369

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

C10510

3-oxocholoyl-CoA

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C12164

H2

C12494

N-acetyl-D-muramate 6-phosphate

C10799

DNA with lesion

C11480

phenylacetate

C803

ethylphosphate

C3865

phosphonoacetaldehyde

C12116

(2-aminoethyl)phosphonate

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9865

Mg-protoporphyrin

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9845

cobalt-sirohydrochlorin

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C6624

protoheme

C13422

hydrogen cyanide

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7121

oxygen

C7118

hydrogen sulfide

C8419

sn-glycerol 3-phosphate

C6427

2,3-diphospho-D-glycerate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6744

CMP-N-acetyl-β-neuraminate

C6755

(R)-citramalate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C8958

superoxide

C8959

monodehydroascorbate radical

C12958

4-nitrobenzyl alcohol

C12956

4-nitrobenzaldehyde

C13088

chloramphenicol 3-acetate

C4960

N-acetyl-β-neuraminate

C6596

2-iminosuccinate

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4734

dimethyl sulfide

C4678

glutathione

C4644

S-sulfanylglutathione

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C7864

Fe3+

C11009

Mg2+

C11023

Fe2+

C11019

Ca2+

C11011

Cu2+

C11006

Co2+

C4328

ammonium

C4320

H+

C1689

trimethyl sulfonium

C7016

sulfite

C7022

selenide

C7014

sulfate

C7020

selenate

C7024

thiosulfate

C7036

hydrogencarbonate

C7034

hydrogensulfite

C7017

selenite

C6762

phosphonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1434

D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3574

spermidine

C3548

putrescine

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C7685

allantoate

C9539

(S)-(+)-allantoin

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C10996

nicotinamide

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C11720

testosterone

C10542

androst-4-ene-3,17-dione

C10555

5α-androstane-3,17-dione

C6358

glycocholate

C6332

cholate

C6306

3-dehydrocholate

C6352

isocholate

C6362

deoxycholate

C12556

androsterone

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C4922

isobutanoyl-CoA

C5014

phenylacetyl-CoA

C4981

CoA-disulfide

C5056

linoleoyl-CoA

C4915

α-linolenoyl-CoA

C4937

3'-dephospho-CoA

C4901

succinyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5298

acetyl-CoA

C4927

(E)-glutaconyl-CoA

C4913

malonyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5281

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

C5313

2-methylbutanoyl-CoA

C5314

2-methylacetoacetyl-CoA

C4196

choloyl-CoA

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C1337

crotonyl-CoA

C11400

phytenoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C7162

cerotoyl-CoA

C7169

2-carboxy-cerotoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C5892

palmitoyl-CoA

C2873

pristanoyl-CoA

C10758

3-oxoadipyl-CoA

C2008

acetoacetyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C3727

all-trans-retinyl palmitate

C10076

L-galactono-1,4-lactone

C2598

D-glucono-1,5-lactone

C10049

FMNH2

C10052

FMN

C10053

FAD

C10050

FADH2

C5392

(S)-NADHX

C5394

(R)-NADHX

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C1680

menaquinol-8

C1679

menaquinol-6

C1672

menaquinol-7

C1863

demethylmenaquinol-8

C1857

demethylmenaquinol-6

C1860

demethylmenaquinol-7

C10614

coenzyme A

C7129

5,6,7,8-tetrahydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10982

nicotinate

C10994

thiamine

C10988

riboflavin

C10986

L-ascorbate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C4208

pyridoxine

C4200

pyridoxal

C4216

pyridoxamine

C10143

menadione

C10966

all-trans-retinol

C4985

(S)-1-pyrroline-5-carboxylate

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C12742

7,8-dihydrolumazine

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12714

7,8-dihydropterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C10609

7,8-dihydropteroate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C9455

guanine

C9454

adenine

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C15085

guanosine

C15091

inosine

C15094

xanthosine

C15088

adenosine

C7785

hypoxanthine

C7743

dAMP

C7840

dGMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7807

dGDP

C7823

dADP

C7817

IDP

C7795

GDP

C7757

ADP

C7827

GMP

C7741

IMP

C7811

XMP

C7809

AMP

C7759

ITP

C7745

GTP

C7844

ATP

C8752

dUDP

C8720

dTDP

C8764

dTTP

C8750

cytidine 2',3'-cyclic monophosphate

C6460

cytidine-3'-monophosphate

C8747

uridine 2'3'-cyclic monophosphate

C6462

uridine 3'-monophosphate

C11481

orotate

C8739

uracil

C8724

dUTP

C8760

UTP

C8772

dCTP

C8744

dTMP

C8770

dUMP

C8755

dCMP

C8733

dCDP

C8732

CDP

C8761

CTP

C8714

UDP

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7804

UDP-α-D-galactofuranose

C8666

UDP-α-D-galactose

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7722

UDP-α-D-glucuronate

C7780

UDP-α-D-glucose

C7764

UDP-α-D-galacturonate

C7738

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5640

UDP-N-acetyl-α-D-galactosamine

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1939

dTDP-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C2702

cytidine

C2706

uridine

C2519

thymidine

C2527

2'-deoxyuridine

C2523

2'-deoxycytidine

C2245

CMP

C2241

UMP

C9540

preQ1

C4615

scopoletin

C4655

coumarin

C10621

4-methylumbelliferone

C13366

(indole-3-yl)acetonitrile

C13354

preQ0

C13404

neolinustatin

C13376

lotaustralin

C13380

linustatin

C13392

linamarin

C13426

taxiphyllin

C4190

2-hydroxy-2-methylpropanenitrile

C13330

(2R)-2-hydroxy-2-methylbutanenitrile

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C7139

4-tyrosol

C3093

urate

C8490

3-methoxy-4-hydroxyphenylglycol

C3647

phenylacetaldehyde

C3641

(4-hydroxyphenyl)acetaldehyde

C8335

(indol-3-yl)acetaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C6043

4-methylphenol

C2768

catechol

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C11421

protocatechuate

C2569

coumarinate

C11429

salicylate

C8974

4-aminobenzoate

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8534

cis-aconitate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C6186

(S)-lactate

C6185

(R)-lactate

C3421

formate

C3308

pyruvate

C11517

acetate

C3420

propanoate

C3418

butanoate

C3412

decanoate

C3409

octanoate

C6371

3-oxoadipate

C13266

(15Z)-tetracosenoate

C13210

oleate

C6379

linoleate

C10572

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

C10590

α-linolenate

C13260

phytenate

C3383

palmitate

C2774

pristanate

C13300

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

C11482

(R)-pantoate

C11485

D-gluconate

C11487

D-mannonate

C2137

D-tagaturonate

C2021

aldehydo-D-galacturonate

C2047

aldehydo-D-glucuronate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3536

L-α-amino-ε-keto-pimelate

C5579

L-serine

C11441

β-alanine

C5581

L-proline

C12067

glycine

C5597

L-alanine

C5588

L-leucine

C5609

L-glutamine

C8797

D-glutamate

C5607

L-glutamate

C5584

L-lysine

C5605

L-histidine

C5642

L-arginine

C5577

L-threonine

C5573

L-tyrosine

C5643

L-asparagine

C5612

L-cysteine

C5575

L-tryptophan

C2469

L-phenylalanine

C8790

D-phenylalanine

C8799

D-alanine

C12065

L-saccharopine

C12063

seleno-L-homocysteine

C12073

L-aspartyl-4-phosphate

C5476

formyl-L-isoglutamine

C5466

N-formimino-L-glutamate

C14988

N-acetyl-L-citrulline

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C3402

3-phospho-L-serine

C12303

L-citrulline

C5571

L-valine

C5603

L-isoleucine

C12231

L-ornithine

C12237

L-canaline

C12245

L-homoserine

C12227

O-succinyl-L-homoserine

C12229

O-phospho-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12247

L-homocysteine

C2426

S-sulfo-L-cysteine

C12239

L-aspartate 4-semialdehyde

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5583

L-methionine

C5580

L,L-diaminopimelate

C5595

L-cystathionine

C5601

L-isoglutamine

C6090

methylglyoxal

C2040

diacetyl

C2858

glycolaldehyde

C3483

formaldehyde

C3494

isobutanal

C3523

1-propanal

C3500

acetaldehyde

C3485

butan-1-al

C6245

(R)-lactaldehyde

C6246

(S)-lactaldehyde

C14804

phytenal

C9494

D-glyceraldehyde

C5533

L-glyceraldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2141

aldehydo-D-mannose

C2140

β-D-mannopyranose

C2108

β-D-galactopyranose

C2109

α-D-galactopyranose

C6134

α-L-rhamnopyranose

C6133

β-L-rhamnopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C6190

aldehydo-L-arabinose

C3447

propan-1-ol

C3450

ethanol

C3448

methanol

C3449

butan-1-ol

C14807

phytol

C3731

glycerol

C427

L-arabinitol

C6561

D-mannitol

C6555

galactitol

C11919

ethylene glycol

C2022

(R)-propane-1,2-diol

C2023

(S)-propane-1,2-diol

C10527

myo-inositol

C13576

1D-myo-inositol 1-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C9077

(2E,6E)-farnesyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C5383

all-trans-octaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C668

iron(III) dicitrate

C666

ferric-enterobactin complex

C4086

1-(β-D ribofuranosyl)nicotinamide

C4068

5-dehydro-4-deoxy-D-glucuronate

C3685

XLLG xyloglucan oligosaccharide

C3687

XLXG xyloglucan oligosaccharide

C3689

XXLG xyloglucan oligosaccharide

C3694

XXXG xyloglucan oligosaccharide

C5727

raffinose

C5718

selaginose

C10688

maltotriose

C6899

stachyose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10694

melibiose

C10693

sucrose

C6823

α,α-trehalose

C6821

α-lactose

C6917

β-D-cellobiose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C14474

N-acetyl-α-D-mannosamine

C5286

N-acetyl-β-D-glucosamine

C6153

β-L-fucopyranose

C6154

α-L-fucopyranose

C2012

keto-D-fructose

C8835

β-D-fructofuranose

C7957

L-fuculose

C7089

keto-L-rhamnulose

C2143

D-xylulose

C7173

L-ribulose

C11625

1-O-acetyl-α-maltose

C11627

3'-ketolactose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C10263

ADP-α-D-glucose

C1015

GDP-α-D-glucose

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10340

D-erythrose 4-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10356

4-phospho-D-erythronate

C10326

β-D-fructose 1,6-bisphosphate

C2989

β-D-fructofuranose 6-phosphate

C15303

D-fructose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C10607

L-ribulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8817

L-rhamnulose 1-phosphate

C8819

L-fuculose 1-phosphate

C8815

α-D-galactose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3675

D-altronate

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C3676

L-idonate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7652

cyclic-AMP

C7841

adenosine 2',3'-cyclic monophosphate

C7641

adenosine 3'-monophosphate

C7645

guanosine 2',3'-cyclic monophosphate

C7653

guanosine 3'-monophosphate

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10267

pppGpp

C10266

ppGpp

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C4240

reduced β-nicotinamide D-ribonucleotide

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA