an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

selenophosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

urocanate

4-imidazolone-5-propanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

indole-3-ethanol

4-hydroxy-2-nonenal

(R)-2,3-dihydroxy-3-methylpentanoate

3-phosphooxypyruvate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

L-3-cyclohex-2'-enylalanine

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

dehydroprephenate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

4'-phosphopantetheine

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

α, α'-trehalose 6,6'-bismycolate

urea

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

D-glucurono-6,3-lactone

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

4-acetamidobutanal

4-acetamidobutanoate

dimethylsulfoniopropanoate

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

acetyl phosphate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

4-amino-4-deoxychorismate

hydrogen selenide

O-acetyl-L-serine

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

H₂

acrylamide

acrylate

propionamide

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

(R)-pantothenate

2-dehydropantoate

1,6-anhydro-N-acetyl-β-muramate

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

prenyl diphosphate

ethanolamine

formamide

4-methyl-3-oxoadipate

arsenite

phthalate

phthalate 4,5-cis-dihydrodiol

prephytoene diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

2-phenylethanol

carbonic acid

3-methylbutanol

3-methylbutanal

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

isobutanol

2-methylbutanol

2-methylbutanal

2-oleoylglycerol

indole-3-glycol

indole-3-glycol aldehyde

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(L-threonylcarbamoyl)adenylate

S-acetyldihydrolipoamide

S-adenosyl 3-(methylsulfanyl)propylamine

4-methyl-2-oxopentanoate

S-methyl-5'-thioadenosine

(S)-3-methyl-2-oxopentanoate

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

4-fumaryl-acetoacetate

acetoacetate

α-ribazole 5'-phosphate

2-iminoacetate

L-selenocystathionine

methylsalicylate

histidinal

histidinol

salicyl alcohol

D-erythro-imidazole-glycerol-phosphate

pimelate

pimeloyl-CoA

glutathione disulfide

pseudouridine 5'-phosphate

1-phosphatidyl-myo-inositol

1-phosphatidyl-myo-inositol 2-mannose

chlorite

β-D-ribosylnicotinate

shikimate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

3-dehydroshikimate

(S)-dihydroorotate

carbamoyl phosphate

orotidine 5'-phosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

6-phospho D-glucono-1,5-lactone

citrate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

ammonia

hydroxylamine

D-gluconate 6-phosphate

S-(hydroxymethyl)mycothiol

S-formylmycothiol

tartronate semialdehyde

anthranilate

N-(5-phosphoribosyl)-anthranilate

β-D-fructose 2,6-bisphosphate

1,4-dihydroxy-2-naphthoate

DNA without lesion

dihydroxyacetone

glycerone phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

dethiobiotin

2-aminomalonate semialdehyde

4-aminobutanoate

succinate semialdehyde

3-oxopropanoate

(S)-2-aceto-2-hydroxybutanoate

imidazole acetol-phosphate

L-histidinol phosphate

prephenate

carbon monoxide

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

dihydrolipoamide

lipoamide

S-ribosyl-L-homocysteine

autoinducer 2

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

preuroporphyrinogen

porphobilinogen

coproporphyrinogen III

hydrogen peroxide

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isopentenyl diphosphate

α-D-glucosamine 1-phosphate

oxalosuccinate

oxaloacetate

(S)-2-acetolactate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

xanthine

phosphoenolpyruvate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

H₂O

L-dehydro-ascorbate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

α-D-galacturonate 1-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

pyruvic oxime

4-oxoglutaramate

selenodiglutathione

glutathioselenol

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

urea-1-carboxylate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

chlorate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

pseudouridine

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

quinolinate

2-amino-3-carboxymuconate-6-semialdehyde

selenide

nitrite

nitrate

selenate

sulfate

superoxide

thiosulfate

hydrogencarbonate

sulfite

OH^-

hydrogensulfite

selenite

molybdate

perchlorate

phosphonate

phosphate

triphosphate

diphosphate

chloride

Fe³⁺

H⁺

ammonium

Cu²⁺

Cd²⁺

Fe²⁺

trimethyl sulfonium

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

methionol

3-(methylsulfanyl)propanal

S-(hydroxymethyl)glutathione

glutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

taurine

methanethiol

thiocyanate

mycothiol

S-sulfanylglutathione

acrylonitrile

preQ₀

(indole-3-yl)acetonitrile

hydrogen cyanide

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

putrescine

spermidine

glycine betaine

choline

betaine aldehyde

betaine aldehyde hydrate

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FMN

FAD

FADH₂

FMNH₂

(S)-NADHX

(R)-NADHX

demethylmenaquinol-7

demethylmenaquinol-8

ubiquinol-8

menaquinol-7

menaquinol-8

3-demethylubiquinol-8

NAD⁺

NADP⁺

NADH

NADPH

L-ascorbate

thiamine

nicotinamide

nicotinate

riboflavin

L-carnitine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

pyridoxamine 5'-phosphate

pyridoxamine

all-trans-retinol

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

glycerol

(2E,6E)-farnesol

propan-1-ol

methanol

ethanol

butan-1-ol

phytol

myo-inositol

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

phytate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

protocatechuate

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

ethylene glycol

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

lanosterol

chenodeoxycholate

cholate

ergosterol

lanosteryl oleate

ergosteryl oleate

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

chloroethylmalonyl-CoA

4-chloro-crotonyl-CoA

4-chloro-3-hydroxybutyryl-CoA

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

5-chloro-5-deoxy-D-ribose

5-chloro-5-deoxy-D-ribono-γ-lactone

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

acetamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

4-methylphenol

hippurate

L-homocysteine

2-iminosuccinate

2-iminobutanoate

salicylate

4-aminobenzoate

benzoate

orotate

(R)-pantoate

acetate

D-gluconate

(S)-1-pyrroline-5-carboxylate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

cis-aconitate

cis-2-methylaconitate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

L-α-amino-ε-keto-pimelate

L-tyrosine

L-phenylalanine

L-histidine

L-tryptophan

D-aspartate

D-glutamate

D-alanine

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

O-acetyl-L-homoserine

L-proline betaine

3-phospho-L-serine

L-selenocysteine

L-valine

L-isoleucine

L-leucine

glycine

L-proline

L-alanine

L-methionine

L-cysteine

L-ornithine

L-arginine

L-lysine

L-cystathionine

L-asparagine

L,L-diaminopimelate

L-threonine

L-serine

L-aspartate

L-glutamine

L-glutamate

L-isoglutamine

L-citrulline

S-sulfo-L-cysteine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

β-alanine

(S)-3-amino-2-methylpropanoate

chorismate

D-glucarate

fumarate

succinate

(S)-malate

(S)-lactate

(R)-glycerate

(R)-lactate

propanoate

formate

pyruvate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

glyoxylate

2-oxobutanoate

2-oxoglutarate

palmitate

pristanate

(15Z)-tetracosenoate

phytenate

oleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

diacetyl

(R)-acetoin

methylglyoxal

(2E,6E)-farnesal

glycolaldehyde

salicylaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

D-glyceraldehyde

L-glyceraldehyde

β-D-galactopyranose

α-D-galactopyranose

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

phytenal

1-octanal

isobutanal

1-propanal

formaldehyde

acetaldehyde

butan-1-al

a coenzyme-A group

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

UDP-α-D-galactose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-gulose

dTDP-6-deoxy-α-D-allose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

GDP-α-D-glucose

GDP-α-D-mannose

ADP-α-D-glucose

ADP-D-ribose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-glyceraldehyde 3-phosphate

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

maltotriose

maltotetraose

sucrose

α,α-trehalose

L-gulonate

aldehydo-L-galactonate

3'-dephospho-CoA

isobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

4-hydroxybenzoyl-CoA

chenodeoxycholoyl-CoA

choloyl-CoA

malonyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

acetyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

methylacrylyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

crotonyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytenoyl-CoA

oleoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

butanoyl-CoA

propanoyl-CoA

palmitoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

all-trans-retinyl palmitate

D-glucono-1,5-lactone

L-galactono-1,4-lactone

tributyrin

1,2-dibutyrin

all-trans phytofluene

15-cis-phytoene

all-trans-phytoene

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

phytyl diphosphate

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

urate

4-tyrosol

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

vanillyl mandelate

3-methoxy-4-hydroxyphenylglycol

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

adenine

guanine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

adenosine

inosine

xanthosine

guanosine

hypoxanthine

dAMP

dGMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

ITP

GTP

ATP

IDP

GDP

ADP

AMP

IMP

XMP

GMP

salinosporamide A

dCTP

dUTP

dUMP

CTP

cytosine

dCMP

dCDP

CDP

dUDP

UDP

dTTP

uracil

UTP

dTMP

dTDP

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

preQ₁

isoguanine

N3-methylcytosine

N¹-methyladenine

N¹-ethyladenine

precorrin-3A

precorrin-3B

precorrin-1

precorrin-2

adenylo-succinate

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-AMP

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

protoheme

N₂

nitrous oxide

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

(Z,Z)-biliverdin-IX α

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

monodehydroascorbate radical

hydroxyl radical

nitric oxide

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate