an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

pseudouridine

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

dihydrophloroglucinol

phloroglucinol

pyrogallol

1,2,3,5-tetrahydroxybenzene

N⁵-carboxyaminoimidazole ribonucleotide

8-amino-7-oxononanoate

(S)-2-amino-6-oxohexanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

2-iminoacetate

2-amino-3-carboxymuconate-6-semialdehyde

3,5-dihydro-4H-imidazol-4-one

4-aminoimidazole

5-aminoimidazole-4-carboxylate

5-ureidoimidazole-4-carboxylate

4-amino-2-methyl-5-pyrimidinemethanol

2-(α-hydroxyethyl)thiamine diphosphate

gallate

CDP-glycerol

S-methyl-5'-thioadenosine

N-succinyl-L,L-2,6-diaminopimelate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(2R,4S)-2, 4-diaminopentanoate

(2R)-2-amino-4-oxopentanoate

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

adenosine 5'-phosphosulfate

1,6-anhydro-N-acetyl-β-muramate

5,6-dimethylbenzimidazole

dialurate

(R)-1-amino-2-propanol O-2-phosphate

6-phospho D-glucono-1,5-lactone

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

D-gluconate 6-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(L-threonylcarbamoyl)adenylate

trans-O-hydroxybenzylidenepyruvate

(R)-2,3-dihydroxy-3-methylpentanoate

oxalosuccinate

autoinducer 2

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

pyruvic oxime

1-piperideine 6-carboxylate

α-ribazole

α-ribazole 5'-phosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

(indol-3-yl)pyruvate

pyrazine-2-carboxylate

histidinal

(lipoyl)adenylate

acetoacetate

ammonia

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

chloroacetaldehyde

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

carbon monoxide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

5-aminopentanoate

dihydrolipoate

thiamine diphosphate

histidinol

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-deoxy-α-D-manno-2-octulosonate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

hydroxylamine

1-deoxy-L-glycero-tetrulose 4-phosphate

2-oleoylglycerol

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

DNA without lesion

glycolate

nigerose

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

5-hydroxytryptophol

citrate

thiamine phosphate

N5-(L-1-carboxyethyl)-L-ornithine

H₂

L-selenocystathionine

arsenite

heteropyrithiamine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

3-mercaptopyruvate

oxalate

preuroporphyrinogen

5-aminolevulinate

porphobilinogen

2-keto-D-gluconate

2,5-didehydro-D-gluconate

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

hydroxypyruvate

3-phosphooxypyruvate

2-dehydropantoate

hydrogen selenide

O-acetyl-L-serine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

N-acetylmuramoyl-L-ala-D-glu-(L)-meso-diaminopimelate -(L)-D-ala

N-acetylmuramoyl-L-ala-D-glu

quinolinate

S-ribosyl-L-homocysteine

3-deoxy-D-manno-octulosonate 8-phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

dihydrolipoamide

S-acetyldihydrolipoamide

prenyl diphosphate

prephenate

3-dehydroshikimate

shikimate

shikimate 3-phosphate

4-aminobutanoate

chloramphenicol

5-methylcytosine

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

crotonate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

7,8-diaminopelargonate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

isopentenyl diphosphate

acetyl phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

L-canavanine

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

xanthine

3-ureidopropanoate

5-phospho-β-D-ribosylamine

coproporphyrinogen III

selenophosphate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

5-enolpyruvoyl-shikimate 3-phosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

ethanolamine

orotidine 5'-phosphate

(S)-dihydroorotate

carbamoyl phosphate

pseudouridine 5'-phosphate

oxaloacetate

hydrogen peroxide

salicyl alcohol

S-adenosyl 3-(methylsulfanyl)propylamine

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

dihydroxyacetone

glycerone phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

3-methyl-2-oxobutanoate

butanoyl phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-C-methyl-D-erythritol 4-phosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

α-D-glucosamine 1-phosphate

phosphoenolpyruvate

dethiobiotin

CO₂

H₂O

3-phenyl-2-oxopropanoate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

pyruvate

2-oxobutanoate

L-α-amino-ε-keto-pimelate

L-citrulline

L-methionine

L-isoleucine

L-leucine

L-histidine

L-arginine

L-phenylalanine

L-valine

L-serine

L-tyrosine

L-tryptophan

L-threonine

L-proline

glycine

L-lysine

L-asparagine

L-glutamate

L-glutamine

L-aspartate

L-alanine

L-cysteine

L-glutamate-5-semialdehyde

L-canaline

S-sulfo-L-cysteine

O-phospho-L-homoserine

O-succinyl-L-homoserine

L-homoserine

L-homocysteine

L-ornithine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

meso-diaminopimelate

L-selenocysteine

L-allo-threonine

D-ornithine

L-cystathionine

L,L-diaminopimelate

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

L-threo-3-phenylserine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

D-glutamate

D-aspartate

D-proline

D-alanine

seleno-L-homocysteine

3-phospho-L-serine

N-formimino-glycine

N-carbamoylglycine

O-acetyl-L-homoserine

chorismate

succinate

fumarate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

(R)-2-hydroxyglutarate

(R)-glycerate

propanoate

acetate

formate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

apo-4'-lycopenoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

pristanate

palmitate

fluoroacetate

D-gluconate

5-chloro-5-deoxy-D-ribonate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

protocatechuate

2,3-dihydroxybenzoate

salicylate

benzoate

4-aminobenzoate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

fluoroacetaldehyde

glycolaldehyde

salicylaldehyde

(2E,6E)-farnesal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

L-glyceraldehyde

butan-1-al

1-propanal

isobutanal

1-octanal

acetaldehyde

formaldehyde

phytenal

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

methylglyoxal

diacetyl

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

galactitol

D-sorbitol

L-iditol

D-sorbitol 6-phosphate

(2E,6E)-farnesol

hydroquinone

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

apo-4'-lycopenal

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

keto-D-fructose

β-D-fructofuranose

keto-L-sorbose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-neuraminate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

β-D-cellobiose 6'-phosphate

CMP-N-acetyl-β-neuraminate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

GDP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

UDP-α-D-galacturonate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannuronate

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

aldehydo-D-arabinose 5-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

erythrulose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

maltotriose

maltotetraose

sucrose

aldehydo-L-galactonate

L-gulonate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

pppGpp

ppGpp

XMP

dGTP

dGDP

dATP

dADP

hypoxanthine

GMP

AMP

5'-deoxyadenosine

ATP

ADP

GTP

IMP

adenylo-succinate

GDP

5,6-dihydrothymine

5,6-dihydrouracil

NADH

NADPH

NAD⁺

NADP⁺

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

two adjacent thymidines in DNA

5-fluorocytosine

5'-deoxy-5'-fluoroadenosine

5-fluorouracil

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

xanthosine

guanosine

inosine

adenosine

dCMP

dUMP

dTMP

CMP

UMP

dUTP

dCTP

dTTP

dTDP

dUDP

dCDP

CDP

UDP

CTP

UTP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

preQ₁

cytosine

thymine

uracil

purine

adenine

guanine

4-methylphenol

DNA with lesion

phenylacetate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

cobalt-factor III

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

adenosylcobalamin 5'-phosphate

adenosylcobyrate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

protoheme

N₂

hydrogen cyanide

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

2-chloroacetate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

monodehydroascorbate radical

nitric oxide

superoxide

chloramphenicol 3-acetate

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

thiocyanate

methanethiol

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

ammonium

H⁺

Co²⁺

Fe²⁺

Zn²⁺

Ca²⁺

Mg²⁺

trimethyl sulfonium

hydrogensulfite

nitrate

nitrite

selenite

selenate

sulfite

thiosulfate

sulfate

hydrogencarbonate

selenide

phosphate

triphosphate

diphosphate

chloride

cyanophycin primer-L-aspartate

cyanophycin primer

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

meso-diaminopimeloyl-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

spermidine

putrescine

spermine

cadaverine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

acetamide

pyrazinamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

(indol-3-yl)acetate

phenylacetyl-CoA

2-methylbutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

succinyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

isobutanoyl-CoA

acetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

D-glucono-1,5-lactone

FMNH₂

FMN

FAD

FADH₂

(S)-NADHX

(R)-NADHX

(R)-lipoate

coenzyme A

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

thiamine

riboflavin

L-ascorbate

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridine

precorrin-1

precorrin-7

precorrin-8x

precorrin-2

precorrin-3A

precorrin-5

precorrin-3B

precorrin-4

precorrin-6B

precorrin-6A

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

2-hydroxychromene-2-carboxylate

preQ₀

6,8-dihydroxypurine

4-tyrosol

urate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

(indol-3-yl)acetaldehyde