an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

theophylline

1,3-dimethylurate

3-methylxanthine

3-methylurate

1-methylxanthine

1-methylurate

(4-hydroxyphenyl)acetate

lipid X

lipid A disaccharide (E. coli)

lipid IV_A

selenodiglutathione

glutathioselenol

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

dihydrophloroglucinol

phloroglucinol

pyrogallol

1,2,3,5-tetrahydroxybenzene

gallate

3'-phosphoadenylyl-sulfate

2-amino-3-carboxymuconate-6-semialdehyde

5-oxo-L-proline

CDP-glycerol

1,6-anhydro-N-acetyl-β-muramate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

ammonia

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

dialurate

N-acetyl-L,L-2,6-diaminopimelate

N-(4-aminobenzoyl)-L-glutamate

(S)-2-amino-6-oxohexanoate

carboxyspermidine

carboxynorspermidine

norspermidine

N²-succinylglutamate

3-(1H-imidazol-4-yl)propanoate

urocanate

2-oleoylglycerol

thiamine diphosphate

propanoyl phosphate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

glycolate

(4S)-4-hydroxy-5-phosphooxypentane-2,3-dione

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

α-ribazole

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

glutathione disulfide

hydroxylamine

glutathionylspermidine

N-(2,3-dihydroxybenzoyl)-L-serine trimer

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

3-keto-L-gulonate 6-phosphate

vanillin

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

4-amino-4-deoxychorismate

γ-L-glutamyl 5-phosphate

α-D-glucosamine 1-phosphate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(R)-2,3-dihydroxy-3-methylpentanoate

L-selenocystathionine

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

prephenate

shikimate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

L-canavanine

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

4-amino-2-methyl-5-pyrimidinemethanol

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

carbonic acid

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

urea

4-aminobutanoate

succinate semialdehyde

3-phosphonopyruvate

quinolinate

hydroxypyruvate

oxalosuccinate

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

5-hydroxytryptophol

3-oxopropanoate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

(S)-dihydroorotate

orotidine 5'-phosphate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

nicotinate adenine dinucleotide

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

acetyl phosphate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

carbon monoxide

3-dehydroquinate

3-dehydroshikimate

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

7-carboxy-7-deazaguanine

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

arsenite

isochorismate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

selenophosphate

cis-coumarinic acid-β-D-glucoside

scopolin

4-hydroxybenzaldehyde

4-methylumbelliferyl glucoside

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

oxalate

(R)-pantothenate

3-methyl-2-oxobutanoate

N-(5-phosphoribosyl)-anthranilate

anthranilate

H₂

carbamoyl phosphate

2-iminoacetate

methylsalicylate

2-dehydropantoate

phenylglyoxylate

isopentenyl diphosphate

(S)-2,3,4,5-tetrahydrodipicolinate

coproporphyrinogen III

autoinducer 2

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

(S)-4-amino-5-oxopentanoate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

(R)-1-amino-2-propanol O-2-phosphate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

butanoyl phosphate

3-keto-β-D-galactose

4'-phosphopantetheine

acetoacetate

5'-phosphoguanylyl(3'→5')guanosine

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

chloramphenicol

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

citrate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

1,3-propanediol

3-hydroxypropanal

ethanolamine

xanthine

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

pseudaminate

oxaloacetate

hydrogen selenide

O-acetyl-L-serine

salicyl alcohol

2-oxoglutaramate

5-guanidino-2-oxopentanoate

hydrogen peroxide

α-D-glucopyranosyl-diphosphoundecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

CO₂

adenosine 3',5'-bisphosphate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

UDP-N-acetyl-α-D-glucosaminouronate

dethiobiotin

S-ribosyl-L-homocysteine

3-phosphooxypyruvate

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

dihydroxyacetone

glycerone phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

phosphoenolpyruvate

H₂O

phosphite

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

1-piperideine 6-carboxylate

L-dehydro-ascorbate

4-methylphenol

L-homocysteine

agmatine

spermidine

putrescine

choline

glycine betaine

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

acetamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3-dehydrocholate

isocholate

glycocholate

cholate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

all-trans-retinyl palmitate

D-glucono-1,5-lactone

tributyrin

1,2-dibutyrin

methylacrylyl-CoA

4-hydroxybutanoyl-CoA

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

isobutanoyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

formyl-CoA

oxalyl-CoA

CoA-disulfide

benzoyl-CoA

malonyl-CoA

succinyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(3S)-citryl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

FMNH₂

FMN

FAD

FADH₂

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

thiamine

riboflavin

nicotinate

L-ascorbate

all-trans-retinol

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

L-carnitine

(S)-1-pyrroline-5-carboxylate

guanine

adenine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

XMP

AMP

IMP

ITP

GTP

ATP

cytidine 2',3'-cyclic monophosphate

cytidine-3'-monophosphate

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

dUDP

dTDP

dCTP

orotate

dCMP

dCDP

CDP

CTP

dUTP

UTP

dTTP

UDP

uracil

dUMP

dTMP

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

CMP

UMP

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-acetamido-3-amino-2,3-dideoxy-α-D-glucuronate

UDP-2,3-diacetamido-2,3-dideoxy-α-D-glucuronate

UDP-2,3-diacetamido-2,3-dideoxy-α-D-mannuronate

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

UDP-4-amino-4,6-dideoxy-N-acetyl-β-L-altrosamine

UDP-2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

isoguanine

preQ₁

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

cobalt-precorrin-5A

cobalt-precorrin-5B

cobalt-precorrin-6A

precorrin-1

cobalt-precorrin-3

precorrin-2

cobalt-precorrin-2

cobyrinate

sirohydrochlorin

cob(I)alamin

adenosylcobalamin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

scopoletin

coumarin

4-methylumbelliferone

preQ₀

neolinustatin

lotaustralin

linustatin

linamarin

taxiphyllin

hydrogen cyanide

(indole-3-yl)acetonitrile

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

salicylaldehyde

urate

4-tyrosol

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

hydroquinone

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

coumarinate

salicylate

benzoate

4-aminobenzoate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

(15Z)-tetracosenoate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

oleate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

pristanate

palmitate

sophorosyloxydocosanoate

13-sophorosyloxydocosanoate 6',6''-diacetate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

D-gluconate

(R)-pantoate

acetate

5-deoxy-D-glucuronate

D-tagaturonate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

pyruvate

L-α-amino-ε-keto-pimelate

L-cysteine

L-asparagine

L-threonine

glycine

L-serine

L-tyrosine

L-glutamine

L-histidine

L-arginine

L-lysine

L-glutamate

L-aspartate

L-tryptophan

L-phenylalanine

D-phenylalanine

D-glutamate

D-aspartate

D-alanine

L-saccharopine

S-sulfanyl-L-cysteine

seleno-L-homocysteine

L-aspartyl-4-phosphate

2-hydroxy-5-oxoproline

L-threonine 3-O-phosphate

3-phospho-L-serine

S-methyl-L-methionine

L-2-acetamido-6-oxoheptanedioate

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

L-citrulline

L-glutamate-5-semialdehyde

L-cystine

L-ornithine

O-phospho-L-homoserine

L-homoserine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-allo-threonine

L-methionine

L-isoleucine

L-valine

L-leucine

L-proline

L-alanine

L-2-amino-5-phosphono-3-cis-pentenoate

L-cystathionine

L,L-diaminopimelate

β-alanine

(S)-3-amino-2-methylpropanoate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

cis-aconitate

D-threo-isocitrate

4-hydroxybutanoate

(R)-lactate

(S)-lactate

(R)-2-hydroxyglutarate

(R)-glycerate

propanoate

formate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

(R)-acetoin

methylglyoxal

diacetyl

acetone

glycolaldehyde

(2E,6E)-farnesal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

butan-1-al

isobutanal

1-propanal

1-octanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

phytenal

(R,R)-2,3-butanediol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

galactinol

D-galactosylononitol

D-ononitol

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

ferric-[N-(2,3-dihydroxybenzoyl)-L-serine trimer] complex

iron(III) dicitrate

ferric-enterobactin complex

vanillylamine

1-(β-D ribofuranosyl)nicotinamide

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose

D-xylulose

L-ribulose

3'-ketolactose

2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

arbutin-6-phosphate

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

β-D-cellobiose 6'-phosphate

α-lactose 6'-phosphate

CMP-pseudaminate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

L-ascorbate 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

raffinose

maltotriose

stachyose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

melibiose

sucrose

α-lactose

β-D-cellobiose

colanic acid

D-altronate

cyclic-AMP

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

5'-deoxyadenosine

adenylo-succinate

8-oxo-GTP

8-oxo-dGTP

(R)-NADPHX

(S)-NADPHX

5-hydroxy-CTP

5-hydroxy-CMP

2-hydroxy-dATP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

2-iminosuccinate

2-iminobutanoate

L-valyl-L-arginyl-4-hydroxy-5-phosphonopentanoate

rhizocticin B

L-arginyl-4-hydroxy-5-phosphonopentanoate

2-amino-4-hydroxy-5-phosphonopentanoate

2-keto-4-hydroxy-5-phosphopentanoate

rhizocticin A

2-keto-5-phospho-3-cis-pentenoate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

adenosyl-cobinamide phosphate

adenosylcobyrate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cobalt-factor III

cobalt-sirohydrochlorin

protoheme

nitrous oxide

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

siroheme

hydrogen sulfide

oxygen

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-D-glutamate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

glycyl-L-proline

glycyl-L-aspartate

glycyl-L-glutamate

glycyl-L-glutamine

glycyl-L-asparagine

L-alanyl-L-glutamate

L-alanyl-L-threonine

L-alanyl-L-leucine

L-alanyl-L-histidine

L-alanyl-glycine

L-alanyl-L-glutamine

L-alanyl-L-aspartate

glycyl-L-methionine

L-methionyl-L-alanine dipeptide

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hydroxyl radical

nitric oxide

superoxide

monodehydroascorbate radical

chloramphenicol 3-acetate

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

methanethiol

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

Fe³⁺

Fe²⁺

Zn²⁺

Cd²⁺

Co²⁺

Ca²⁺

Mn²⁺

Na⁺

ammonium

H⁺

trimethyl sulfonium

OH^-

selenite

sulfite

selenide

molybdate

nitrite

hydrogencarbonate

nitrate

selenate

thiosulfate

sulfate

hydrogensulfite

phosphonate

phosphate

triphosphate

diphosphate