an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
glutathione disulfide
L-dehydro-ascorbate
L-xylo-hex-3-ulono-1,4-lactone
L-gulono-1,4-lactone
α-D-galacturonate 1-phosphate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
8-amino-7-oxononanoate
(S)-2-amino-6-oxohexanoate
S-adenosyl-4-methylsulfanyl-2-oxobutanoate
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
7-epicholate
3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate
5,6-dimethylbenzimidazole
dialurate
(R)-1-amino-2-propanol O-2-phosphate
adenosine 5'-phosphosulfate
2-amino-3-carboxymuconate-6-semialdehyde
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribosylamino)uracil
(S)-2-acetolactate
4-amino-2-methyl-5-pyrimidinemethanol
hydroxypyruvate
3,5-dihydro-4H-imidazol-4-one
4-aminoimidazole
5-aminoimidazole-4-carboxylate
5-ureidoimidazole-4-carboxylate
acetoacetate
(S)-5-amino-3-oxohexanoate
(3S,5S)-3,5-diaminohexanoate
3-ureidopropanoate
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate
(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA
5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
(2Z,4Z)-2-hydroxyhexa-2,4-dienoate
(S)-4-hydroxy-2-oxohexanoate
(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate
3-hydroxy-5- oxohexanoyl-CoA
3-hydroxy-5-oxohexanoate
dihydrophloroglucinol
phloroglucinol
pyrogallol
1,2,3,5-tetrahydroxybenzene
gallate
2-(α-hydroxyethyl)thiamine diphosphate
urea
D-gluconate 6-phosphate
6-phospho D-glucono-1,5-lactone
(S)-2-aceto-2-hydroxybutanoate
(2R,4S)-2, 4-diaminopentanoate
(2R)-2-amino-4-oxopentanoate
1,6-anhydro-N-acetyl-β-muramate
chloroacetaldehyde
nigerose
thiamine diphosphate
oxalosuccinate
acrylamide
acrylate
4-guanidinobutyramide
4-guanidinobutanoate
(indol-3-yl)acetamide
propionamide
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
N5-(L-1-carboxyethyl)-L-ornithine
salicyl alcohol
methylsalicylate
propanoyl phosphate
2-iminoacetate
crotonate
cyclohex-1,5-diene-1-carbonyl-CoA
carbon monoxide
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
indole-3-glycol
indole-3-glycol aldehyde
isobutanol
3-methylbutanol
3-methylbutanal
2-methylbutanol
2-methylbutanal
2-phenylethanol
2-dehydro-3-deoxy-D-gluconate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
(R)-2,3-dihydroxy-3-methylpentanoate
trans-O-hydroxybenzylidenepyruvate
2-oleoylglycerol
creatinine
ammonia
prephenate
5-aminopentanoate
4-amino-4-deoxychorismate
DNA without lesion
N-acetyl-D-galactosamine 6-phosphate
D-galactosamine-6-phosphate
1-deoxy-L-glycero-tetrulose 4-phosphate
D-phenylhydantoin
N-carbamoyl-D-phenylglycine
(L-threonylcarbamoyl)adenylate
coenzyme F390-A
ethanolamine
(indol-3-yl)pyruvate
glycolate
N2-succinyl-L-glutamate 5-semialdehyde
N2-succinylglutamate
4-acetamidobutanal
4-acetamidobutanoate
3-phosphooxypyruvate
N-acetyl-D-muramate 6-phosphate
quinolinate
L-β-lysine
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
diethylthiophosphate
dimethylthiophosphate
diethylphosphate
chloramphenicol
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
4-aminobutanoate
shikimate
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
α-ribazole 5'-phosphate
α-ribazole
isochorismate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
heteropyrithiamine
dihydrolipoate
arsenite
hydrogen selenide
O-acetyl-L-serine
(lipoyl)adenylate
H2
coproporphyrinogen III
selenophosphate
7,8-diaminopelargonate
5-methylcytosine
3-deoxy-D-arabino-heptulosonate 7-phosphate
3-dehydroquinate
3-dehydroshikimate
dethiobiotin
O-ureido-L-homoserine
canavaninosuccinate
L-canavanine
L-arginino-succinate
α-D-glucosamine 1-phosphate
butanoyl phosphate
5-amino-6-(D-ribitylamino)uracil
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
5-phospho-β-D-ribosylamine
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
S-methyl-5'-thioadenosine
poly(ribitol phosphate)
O-D-alanyl-poly(ribitol phosphate)
4-phosphooxy-L-threonine
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
3-amino-1-hydroxyacetone 1-phosphate
S-adenosyl 3-(methylsulfanyl)propylamine
prenyl diphosphate
(R)-4'-phosphopantothenate
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
dihydroxyacetone
5-aminolevulinate
porphobilinogen
preuroporphyrinogen
4-methyl-2-oxopentanoate
(S)-3-methyl-2-oxopentanoate
autoinducer 2
glycerone phosphate
β-nicotinate D-ribonucleotide
β-D-ribosylnicotinate
isopentenyl diphosphate
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
2-C-methyl-D-erythritol 4-phosphate
hydrogen peroxide
S-ribosyl-L-homocysteine
phosphoenolpyruvate
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
histidinal
histidinol
D-erythro-imidazole-glycerol-phosphate
imidazole acetol-phosphate
L-histidinol phosphate
citrate
(R)-pantothenate
3-methyl-2-oxobutanoate
2-dehydropantoate
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
thiamine phosphate
carbamoyl phosphate
CO2
(S)-dihydroorotate
orotidine 5'-phosphate
oxaloacetate
acetyl phosphate
xanthine
H2O
nicotinate adenine dinucleotide
2-carboxy-L-threo-pentonate
2-carboxy-L-xylonolactone
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
bisorganyltrisulfane
2,3-dioxo-L-gulonate
cyclic- 3,4-O-oxalyl-L-threonate
enol-phenylpyruvate
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
5-hydroxyindole thiazolidine carboxylate
dehydroascorbate (bicyclic form)
cyclic-2,3-O-oxalyl-L-threonate
1-piperideine 6-carboxylate
(2E,6E)-farnesyl diphosphate
2-iminopropanoate
2-iminobutanoate
2-iminosuccinate
cyanophycin primer-L-aspartate
cyanophycin primer
N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine
N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
D-alanyl-D-alanine
DNA with lesion
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-4
cobalt-precorrin-5A
131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester
3,8-divinyl protochlorophyllide a
magnesium-protoporphyrin IX 13-monomethyl ester
131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester
chlorophyllide a
protochlorophyllide a
Mg-protoporphyrin
cobalt-precorrin-5B
cobalt-precorrin-6A
cob(II)yrinate c-monoamide
cob(II)yrinate a,c-diamide
cobyrinate
adenosylcobyrate
adenosylcobalamin 5'-phosphate
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)alamin
adenosylcobalamin
cob(I)inamide
adenosylcobinamide
cobalt-precorrin-2
cobalt-precorrin-3
cobalt-sirohydrochlorin
cobalt-factor III
adenosyl-cobinamide phosphate
adenosylcobinamide-GDP
protoheme
hydrogen cyanide
N2
protoporphyrin IX
uroporphyrinogen-I
coproporphyrinogen I
uroporphyrinogen-III
protoporphyrinogen IX
hydrogen sulfide
oxygen
2-chloroacetate
sn-glycerol 3-phosphate
(R)-glycerate
2,3-diphospho-D-glycerate
3-phospho-D-glyceroyl-phosphate
3-phospho-D-glycerate
2-phospho-D-glycerate
(2R)-2,3-dihydroxy-3-methylbutanoate
α-D-glucosamine 6-phosphate
1-oleoyl-2-lyso-glycerone phosphate
5,10-methenyltetrahydrofolate mono-L-glutamate
(R)-2-hydroxyglutarate
superoxide
nitric oxide
monodehydroascorbate radical
parathion
paraoxon
4-nitrophenol
chloramphenicol 3-acetate
dimethyl sulfide
methionol
3-(methylsulfanyl)propanal
S-(hydroxymethyl)glutathione
thiocyanate
glutathione
methanethiol
S-sulfanylglutathione
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
L-cysteate
3-sulfopyruvate
(2R)-3-sulfolactate
(2R)-phospho-3-sulfolactate
(R)-S-lactoylglutathione
ammonium
H+
Co2+
Fe2+
Cd2+
Mg2+
selenide
nitrate
nitrite
selenite
selenate
sulfite
thiosulfate
hydrogencarbonate
hydrogensulfite
sulfate
phosphonate
phosphate
triphosphate
diphosphate
chloride
trimethyl sulfonium
2-aminoprop-2-enoate
(2Z)-2-aminobut-2-enoate
N1-acetylspermidine
N-acetylputrescine
N1-acetylspermine
spermine
putrescine
spermidine
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
fluoroacetaldehyde
fluoroacetate
5'-deoxy-5'-fluoroadenosine
5-fluoro-5-deoxy-D-ribose 1-phosphate
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
5'-chloro-5'-deoxyadenosine
5-chloro-5-deoxyribose 1-phosphate
acetamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
nicotinamide
3α,7α,12β-trihydroxy-5β-cholan-24-oate
3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
9α-hydroxyandrosta-1,4-diene-3,17-dione
androsta-1,4-diene-3,17-dione
androst-4-ene-3,17-dione
3-dehydrocholate
isocholate
glycocholate
cholate
methyl (indol-3-yl)acetate
(indol-3-yl)acetate
2-methylbutanoyl-CoA
(E)-2-methylcrotonoyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
(S)-3-aminobutanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
(3S)-hydroxyadipyl-CoA
benzoyl-CoA
(R)-2-hydroxyglutaryl-CoA
(E)-glutaconyl-CoA
succinyl-CoA
malonyl-CoA
isobutanoyl-CoA
3'-dephospho-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
2-methylacetoacetyl-CoA
acetyl-CoA
crotonyl-CoA
(S)-malyl-CoA
oleoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
butanoyl-CoA
propanoyl-CoA
3-oxoadipyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
3-oxodecanoyl-CoA
3-oxohexanoyl-CoA
3-oxooctanoyl-CoA
all-trans-retinyl palmitate
L-galactono-1,4-lactone
D-glucono-1,5-lactone
FAD
FADH2
FMNH2
FMN
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
(R)-lipoate
coenzyme A
oxidized coenzyme F420-2
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
7,8-dihydrofolate monoglutamate
L-ascorbate
nicotinate
thiamine
riboflavin
pyridoxal
pyridoxal 5'-phosphate
pyridoxamine
pyridoxamine 5'-phosphate
pyridoxine
pyridoxine 5'-phosphate
all-trans-retinol
(S)-1-pyrroline-5-carboxylate
pyridine
precorrin-1
precorrin-3B
precorrin-4
precorrin-5
precorrin-7
precorrin-8x
precorrin-2
precorrin-6B
precorrin-6A
sirohydrochlorin
7,8-dihydrolumazine
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
7,8-dihydropterin
6-(hydroxymethyl)-7,8-dihydropterin
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydropteroate
(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin
guanine
adenine
2'-deoxyguanosine
2'-deoxyadenosine
2'-deoxyinosine
guanosine
xanthosine
adenosine
inosine
purine
hypoxanthine
dIMP
dITP
dGTP
dATP
dGDP
dADP
GDP
ADP
GMP
IMP
XMP
AMP
XTP
GTP
ATP
dTTP
dTDP
cytosine
dUDP
5,6-dihydrothymine
5,6-dihydrouracil
dCMP
dCDP
CDP
dUTP
dCTP
UTP
UDP
dUMP
dTMP
CTP
uracil
orotate
UDP-α-D-galacturonate
UDP-α-D-galactose
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-4-amino-4-deoxy-β-L-arabinopyranose
UDP-β-L-threo-pentapyranos-4-ulose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
CDP-α-D-glucose
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
5-fluorouracil
cytidine
uridine
2'-deoxycytidine
thymidine
2'-deoxyuridine
thymine
CMP
UMP
preQ1
2-hydroxychromene-2-carboxylate
preQ0
salicylaldehyde
6,8-dihydroxypurine
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
4-tyrosol
urate
3-methoxy-4-hydroxyphenylglycol
amino-parathion
methyl parathion
benzaldehyde
(4-hydroxyphenyl)acetaldehyde
phenylacetaldehyde
4-aminophenol
4-methylphenol
2,3-dihydroxybenzoate
protocatechuate
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
salicylate
benzoate
4-aminobenzoate
chorismate
(4S)-4-hydroxy-2-oxoglutarate
fumarate
succinate
L-aspartate
(S)-malate
3-carboxy-cis,cis-muconate
cis-aconitate
D-threo-isocitrate
(S)-lactate
(R)-lactate
propanoate
pyruvate
acetate
formate
butanoate
octanoate
3-oxoadipate
apo-4'-lycopenoate
phytenate
palmitate
D-gluconate
(R)-pantoate
aldehydo-D-galacturonate
aldehydo-D-glucuronate
3-phenyl-2-oxopropanoate
glyoxylate
4-(methylsulfanyl)-2-oxobutanoate
2-oxobutanoate
2-oxoglutarate
L-threo-3-phenylserine
L-serine
creatine
β-alanine
L-alanine
glycine
L-leucine
L-proline
L-glutamine
D-glutamate
L-glutamate
L-lysine
L-histidine
L-arginine
L-threonine
L-asparagine
L-tyrosine
L-cysteine
L-tryptophan
L-phenylalanine
D-aspartate
D-ornithine
D-proline
D-alanine
D-lysine
S-sulfanyl-L-cysteine
L-aspartyl-4-phosphate
sarcosine
N-formimino-glycine
N-carbamoyl-L-aspartate
O-acetyl-L-homoserine
3-phospho-L-serine
L-citrulline
L-isoleucine
L-valine
L-glutamate-5-semialdehyde
L-canaline
L-cystine
O-succinyl-L-homoserine
S-sulfo-L-cysteine
L-ornithine
L-homocysteine
O-phospho-L-homoserine
L-homoserine
L-aspartate 4-semialdehyde
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
meso-diaminopimelate
L-selenocysteine
L-allo-threonine
L-methionine
L-cystathionine
L,L-diaminopimelate
methylglyoxal
diacetyl
glycolaldehyde
1-propanal
isobutanal
1-octanal
butan-1-al
formaldehyde
acetaldehyde
(S)-lactaldehyde
phytenal
α-D-glucopyranose
β-D-glucopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
ethanol
propan-1-ol
methanol
butan-1-ol
phytol
glycerol
D-sorbitol
L-iditol
D-sorbitol 6-phosphate
1-oleoyl-sn-glycerol 3-phosphate
dioleoyl phosphatidate
trans,octacis-decaprenyl phosphate
di-trans,octa-cis-undecaprenyl phosphate
geranyl diphosphate
mono-trans,octa-cis-decaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
apo-4'-lycopenal
pyochelin
1-(β-D ribofuranosyl)nicotinamide
maltotriose
maltotetraose
sucrose
keto-D-fructose
keto-L-sorbose
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetylmuramate
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-α-D-mannosamine
N-acetyl-β-D-glucosamine
β-D-fructofuranose
D-xylulose
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
a peptidoglycan dimer (mycobacteria)
a peptidoglycan dimer (E. faecium, tetrapeptide)
a peptidoglycan dimer (S. aureus)
a peptidoglycan dimer (E. faeciums)
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
sucrose 6F-phosphate
GDP-α-D-glucose
GDP-α-D-mannuronate
GDP-α-D-mannose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
4-phospho-D-erythronate
5-phospho-α-D-ribose 1-diphosphate
D-sedoheptulose 7-phosphate
D-erythrose 4-phosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
β-D-fructofuranose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
D-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
D-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
α-D-ribose 5-phosphate
β-D-ribose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
erythrulose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
L-gulonate
aldehydo-L-galactonate
pppGpp
ppGpp
cyclic-AMP
adenylo-succinate
5'-deoxyadenosine
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)
two adjacent thymidines in DNA
5-fluorocytosine
β-nicotinamide D-ribonucleotide
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
cyclic di-3',5'-guanylate