an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-hydroxyindole thiazolidine carboxylate

pyruvic oxime

4-oxoglutaramate

CDP-glycerol

pseudouridine

1,4-dihydroxy-2-naphthoate

selenodiglutathione

glutathioselenol

formamide

2-amino-3-carboxymuconate-6-semialdehyde

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

2-iminoacetate

propan-2-ol

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

crotonate

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

dihydrophloroglucinol

phloroglucinol

pyrogallol

1,2,3,5-tetrahydroxybenzene

gallate

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

5-amino-6-(5-phospho-D-ribitylamino)uracil

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-amino-2-methyl-5-pyrimidinemethanol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

dialurate

3,5-dihydro-4H-imidazol-4-one

4-aminoimidazole

5-aminoimidazole-4-carboxylate

5-ureidoimidazole-4-carboxylate

S-ribosyl-L-homocysteine

autoinducer 2

2-(α-hydroxyethyl)thiamine diphosphate

glutathione disulfide

N⁵-carboxyaminoimidazole ribonucleotide

hydroxypyruvate

itaconate

coenzyme F₃₉₀-A

3-ureidopropanoate

anthranilate

2-dehydro-3-deoxy-D-gluconate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

(lipoyl)adenylate

glutathionylspermidine

γ-butyrobetaine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

serotonin O-sulfate

5-hydroxytryptophol sulfate

6-hydroxymelatonin

6-sulfatoxymelatonin

N-acetyl-serotonin sulfate

3'-phosphoadenylyl-sulfate

dopamine 3-O-sulfate

carboxynorspermidine

norspermidine

thiamine phosphate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

(S)-ureidoglycolate

2-isopropylmaleate

5-hydroxytryptophol

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

L-selenocystathionine

β-D-fructose 2,6-bisphosphate

4-amino-4-deoxychorismate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(E)-2-benzylidenesuccinyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

acetoacetate

hydrogen selenide

O-acetyl-L-serine

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

4-acetamidobutanal

4-acetamidobutanoate

dimethylsulfoniopropanoate

5-methylcytosine

thiamine diphosphate

3-keto-β-D-galactose

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-β-D-glucuronide

4,8,12-trimethyltridecanoyl-CoA

3-oxopristanoyl-CoA

2-oleoylglycerol

dimethyl sulfoxide

M_LPS

core oligosaccharide-lipid A (E. coli K-12 core type)

L-histidinol phosphate

(R)-mevalonate

(R)-5-phosphomevalonate

coproporphyrinogen III

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

adenosine 3',5'-bisphosphate

oxaloacetate

cyclohex-1,5-diene-1-carbonyl-CoA

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

hydroxylamine

carbonic acid

chloroacetaldehyde

phosphocholine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

DNA without lesion

hydrogen peroxide

quinolinate

(R)-pantothenate

urea

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

α-D-glucosamine 1-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

histidinal

histidinol

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

N-Formyl-L-kynurenine

ammonia

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

3-phosphooxypyruvate

shikimate

3-dehydroquinate

3-dehydroshikimate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

prenyl diphosphate

isopentenyl diphosphate

S-adenosyl 3-(methylsulfanyl)propylamine

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

xanthine

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

N-(5-phosphoribosyl)-anthranilate

oxalosuccinate

butanoyl phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

ethanolamine

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(R)-1-aminopropan-2-ol

(R)-1-amino-2-propanol O-2-phosphate

carbon monoxide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

β-D-ribosylnicotinate

prephenate

enol-phenylpyruvate

γ-L-glutamyl 5-phosphate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(R)-2,3-dihydroxy-3-methylpentanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

citrate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N-carbamoylputrescine

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

2-dehydropantoate

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

pseudouridine 5'-phosphate

L-β-lysine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

ectoine

acetyl phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

orotidine 5'-phosphate

(S)-dihydroorotate

carbamoyl phosphate

CO₂

selenophosphate

phosphoenolpyruvate

H₂

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

4-imidazolone-5-propanoate

urocanate

mesaconate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

glycerone phosphate

H₂O

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

L-α-amino-ε-keto-pimelate

L-kynurenine

L-citrulline

L-methionine

L-phenylalanine

L-tyrosine

L-alanine

L-tryptophan

L-histidine

L-threonine

L-asparagine

L-lysine

L-proline

L-serine

L-isoleucine

glycine

L-leucine

L-valine

L-glutamate

L-arginine

L-glutamine

L-aspartate

L-cysteine

S-sulfo-L-cysteine

L-canaline

L-ornithine

O-succinyl-L-homoserine

L-homocysteine

L-glutamate-5-semialdehyde

L-homoserine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-isoglutamine

L-cystathionine

L-aspartyl-4-phosphate

L,L-diaminopimelate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

D-serine

β-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-glutamate

D-aspartate

D-cysteine

D-alanine

seleno-L-homocysteine

N^ω-phospho-L-arginine

L-threonine 3-O-phosphate

3-phospho-L-serine

(2S, 3S)-3-methylaspartate

N-formimino-glycine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

O-acetyl-L-homoserine

L-proline betaine

3,5,3'-triiodo-L-thyronine

DNA with lesion

phenylacetate

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-4

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

cobalt-precorrin-6A

cobalt-precorrin-2

cobalt-precorrin-3

cobalt-sirohydrochlorin

cobalt-factor III

cobalt-precorrin-5A

cobalt-precorrin-5B

adenosyl-cobinamide phosphate

adenosylcobyrate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

protoheme

nitrous oxide

N₂

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

uroporphyrinogen-III

siroheme

oxygen

hydrogen sulfide

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

1-oleoyl-2-lyso-glycerone phosphate

(S)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

(R)-2-hydroxyglutarate

(2E,6E)-farnesyl diphosphate

pristanate

2-iminobutanoate

2-iminosuccinate

2-iminopropanoate

cyanophycin primer-L-aspartate

cyanophycin primer

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

superoxide

nitric oxide

S-(hydroxymethyl)glutathione

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

coenzyme M

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

Fe³⁺

K⁺

ammonium

Na⁺

H⁺

Co²⁺

Fe²⁺

Mo²⁺

Mn²⁺

Zn²⁺

Cu²⁺

Ni²⁺

trimethyl sulfonium

selenite

nitrate

thiosulfate

trithionate

OH^-

hydrogensulfite

hydrogencarbonate

nitrite

selenate

sulfite

tungstate

molybdate

selenide

sulfate

phosphate

triphosphate

diphosphate

4-methylphenol

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

spermine

cadaverine

putrescine

spermidine

choline

glycine betaine

N-acetyl-serotonin

serotonin

sn-glycero-3-phosphocholine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

thyroxine sulfate

triiodothyronine sulfate

L-thyroxine

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

allantoate

acetamide

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(indol-3-yl)acetate

2-methylbutanoyl-CoA

(S)-3-aminobutanoyl-CoA

glutaryl-CoA

itaconyl-CoA

γ-butyrobetainyl-CoA

L-carnitinyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

benzoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

succinyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

phenylacetyl-CoA

isobutanoyl-CoA

acetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

FADH₂

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinol

menaquinol-13

menaquinol-12

menaquinol-11

menaquinol-10

menaquinol-6

menaquinol-9

menaquinol-7

menaquinol-8

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-11

demethylmenaquinol-10

demethylmenaquinol-6

demethylmenaquinol-9

demethylmenaquinol-7

demethylmenaquinol-8

caldariellaquinone

(R)-lipoate

methyl-CoM

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-2

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

N⁵-methyltetrahydromethanopterin

tetrahydromethanopterin

5,10-methenyltetrahydromethanopterin

5-formyl-tetrahydromethanopterin

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

thiamine

nicotinate

riboflavin

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

L-carnitine

(S)-1-pyrroline-5-carboxylate

precorrin-3B

precorrin-4

precorrin-6A

precorrin-1

precorrin-7

precorrin-8x

precorrin-6B

precorrin-2

precorrin-3A

sirohydrochlorin

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

guanine

adenine

2'-deoxyadenosine

2'-deoxyinosine

2'-deoxyguanosine

guanosine

inosine

xanthosine

adenosine

purine

hypoxanthine

dGMP

dAMP

dIMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

ADP

GDP

XMP

GMP

IMP

AMP

XTP

ITP

ATP

GTP

CDP-choline

5,6-dihydrouracil

5,6-dihydrothymine

cytosine

dUDP

dTDP

dTTP

dUMP

dTMP

dUTP

dCTP

dCMP

dCDP

CDP

uridine 3'-monophosphate

cytidine-3'-monophosphate

orotate

UDP

uracil

UTP

CTP

UDP-α-D-galactofuranose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-fluorouracil

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

CMP

UMP

preQ₁

luteolin

preQ₀

salicylaldehyde

8-hydroxypurine

6,8-dihydroxypurine

4-tyrosol

futalosine

dehypoxanthine futalosine

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

urate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

protocatechuate

dopamine

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

salicylate

benzoate

4-aminobenzoate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

(3E)-2-oxohex-3-enedioate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

cis-homoaconitate

3-carboxy-cis,cis-muconate

(2R)-homocitrate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

propanoate

acetate

formate

pyruvate

butanoate

octanoate

decanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

(R)-pantoate

D-tagaturonate

aldehydo-D-galacturonate

β-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

2-oxoglutarate

2-oxobutanoate

diacetyl

acetone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

glycolaldehyde

(2E,6E)-farnesal

butan-1-al

1-propanal

formaldehyde

1-octanal

isobutanal

acetaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

butan-1-ol

propan-1-ol

ethanol

methanol

phytol

glycerol

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

dioleoyl phosphatidate

2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-(β-D ribofuranosyl)nicotinamide

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

sucrose

allolactose

α-lactose

β-D-cellobiose

colanic acid

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

D-xylulose

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

D-altronate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

5'-deoxyadenosine

adenylo-succinate

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

two adjacent thymidines in DNA

5-fluorocytosine

β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate