an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

N-methylethanolamine phosphate

O-phosphoethanolamine

N-dimethylethanolamine phosphate

phosphocholine

thiamine phosphate

hydrogen peroxide

(R)-pantothenate

5-phospho-β-D-ribosylamine

5-oxo-L-proline

2-C-methyl-D-erythritol 4-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

4-acetamidobutanal

5-hydroxyindole acetaldehyde

methylamine

3-methoxy-4-hydroxyphenylglycolaldehyde

5-methoxyindoleacetaldehyde

5-methoxytryptamine

3,4-dihydroxyphenylacetaldehyde

tryptamine

CO₂

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

phosphoenolpyruvate

oxaloacetate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

orotidine 5'-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

hydroxypyruvate

quinolinate

β-nicotinate D-ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-hydroxytryptophol

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

nicotinate adenine dinucleotide

porphobilinogen

5-aminolevulinate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-keto-D-gluconate

carbon monoxide

2-dehydropantoate

2-dehydro-3-deoxy-D-gluconate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

5-guanidino-2-oxopentanoate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

O-acetyl-L-serine

L-thyroxine phenolic β-D-glucuronide

L-thyroxine acyl β-D-glucuronide

5-hydroxytryptophol glucuronide

N-acetyl-serotonin glucuronide

cotinine-glucuronide

cotinine

nicotine-glucuronide

xanthine

(E)-4-coumaroyl-CoA

isopentenyl diphosphate

(4-hydroxyphenyl)acetate

(R)-mevalonate

N-Formyl-L-kynurenine

aminoacetone

succinate semialdehyde

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

5-carboxymethyl-2-hydroxymuconate

2-maleylacetate

3-keto-β-D-galactose

5-dehydro-D-gluconate

isoquinolin-2(1H)-one

isoquinoline

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

3-deoxy-α-D-manno-2-octulosonate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

hydrogen selenide

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

dimethylsulfoniopropanoate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

glycolate

2-phosphoglycolate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

3-dehydroshikimate

3-dehydroquinate

acetoacetate

4-fumaryl-acetoacetate

shikimate

1,6-anhydro-N-acetyl-β-muramate

N-carbamoylputrescine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

lipid IV_A

lipid A disaccharide (E. coli)

coproporphyrinogen III

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

anthranilate

L-gulono-1,4-lactone

S-ribosyl-L-homocysteine

carbonic acid

acetyl phosphate

2,5-didehydro-D-gluconate

salicyl alcohol

methylsalicylate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

4'-phosphopantetheine

lipid X

3-hydroxyanthranilate

histidinol

L-histidinol phosphate

4-amino-4-deoxychorismate

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

D-xylono-1,5-lactone

hexulose 6-phosphate

prenyl diphosphate

ethanolamine

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

urea

3-deoxy-D-arabino-heptulosonate 7-phosphate

dethiobiotin

oxalosuccinate

histidinal

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-demethylubiquinol-6

2-dehydro-3-deoxy-D-galactonate

N-acetyl-β-glucosaminylamine

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

β-D-ribosylnicotinate

isochorismate

5-amino-6-(D-ribitylamino)uracil

N¹-(5-phospho-β-D-ribosyl)glycinamide

γ-L-glutamyl 5-phosphate

(S)-dihydroorotate

homogentisate

(2-hydroxyphenyl)acetate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

2-oleoylglycerol

(S)-4-amino-5-oxopentanoate

7,8-diaminopelargonate

3'-ketosucrose

3-deoxy-D-manno-octulosonate 8-phosphate

N-(5-phosphoribosyl)-anthranilate

citrate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

α-D-galactosyl-diphosphoundecaprenol

6-deoxyerythronolide B

(S)-2-amino-6-oxohexanoate

1-piperideine 6-carboxylate

glycerone phosphate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

8-amino-7-oxononanoate

pimeloyl-CoA

tartronate semialdehyde

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

5-dehydro-4-deoxy-D-glucarate

preuroporphyrinogen

6-aminohexanoate

6-aminohexanoate linear dimer

(1R,2R)-1,2-diphenylethane-1,2-diol

cis-stilbene oxide

selenophosphate

D-galacto-hexodialdose

4-aminobutanoate

carbamoyl phosphate

DNA without lesion

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

D-erythro-imidazole-glycerol-phosphate

2-isopropylmaleate

(2S)-2-isopropylmalate

prephenate

(L-threonylcarbamoyl)adenylate

2-keto-L-gulonate

N6'-acetylkanamycin-B

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

nigerose

imidazole acetol-phosphate

4-maleyl-acetoacetate

1,4-dihydroxy-2-naphthoate

L-canavanine

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

norspermidine

carboxynorspermidine

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

1,4-dihydroxy-2-naphthoyl-CoA

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

itaconate

4-pyridoxolactone

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

benzoylsuccinyl-CoA

FK-506

31-O-desmethylFK-506

formamide

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

H₂

prephytoene diphosphate

presqualene diphosphate

squalene

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

glutathionylspermidine

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

N-succinyl-L,L-2,6-diaminopimelate

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

2-iminoacetate

autoinducer 2

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

D-xylonate

2-dehydro-3-deoxy-D-arabinonate

mercuriphenyl acetate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2,5-dioxopentanoate

2-amino-3-carboxymuconate-6-semialdehyde

glutathione disulfide

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

N-acetyl-D-muramate 6-phosphate

α-D-glucosamine 1-phosphate

octopamine

(R)-synephrine

glutathioselenol

selenodiglutathione

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

α-D-galacturonate 1-phosphate

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-dehydro-ascorbate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

L-homocysteine

hippurate

4-methylphenol

hypoglycin B

L-kynurenine

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-methionine

L-cysteine

L-alanine

glycine

L-proline

L-tryptophan

L-selenocysteine

L-phenylalanine

L-leucine

L-isoleucine

L-valine

L-glutamate

L-glutamine

L-aspartyl-4-phosphate

L-aspartate

L-tyrosine

L-arginine

L-serine

L-asparagine

L-threonine

L-histidine

L-cystathionine

L-lysine

L,L-diaminopimelate

L-ornithine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-formyl-L-methionine

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

L-homoserine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-cystine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-4-hydroxyglutamate semialdehyde

meso-diaminopimelate

L-2-amino-3-oxobutanoate

S-sulfanyl-L-cysteine

L-saccharopine

O-acetyl-L-homoserine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

D-alanine

D-glutamate

D-phenylalanine

β-alanine

3,5,3'-triiodo-L-thyronine

ADP

ATP

AMP

GTP

GDP

GMP

hypoxanthine

dATP

dADP

dGTP

dGDP

ITP

IDP

dITP

dIDP

5'-deoxyadenosine

adenylo-succinate

IMP

ppGpp

pppGpp

XMP

1-(5-phospho-β-D-ribosyl)-ATP

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

cyclic-AMP

8-oxo-dGMP

8-oxo-dGTP

1-(5-phospho-β-D-ribosyl)-AMP

dGMP

2'-deoxyguanosine

dAMP

2'-deoxyadenosine

cyclic-GMP

dIMP

XTP

8-oxo-GMP

8-oxo-GTP

isoguanine

CDP-4-dehydro-6-deoxy-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-tyvelose

CDP-α-D-paratose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-mycarose

dTDP-D-desosamine

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-acetamido-2,6-dideoxy-α-D-xylo-hex-4-ulose

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-fucosamine

UDP-N-acetyl-α-D-quinovosamine

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

guanine

adenine

uracil

preQ₁

NADP⁺

NAD⁺

NADPH

NADH

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dTMP

dUMP

dCMP

dCDP

dTDP

dUDP

dCTP

dTTP

dUTP

UDP

CDP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

2-hydroxy-dATP

5-hydroxy-CTP

uridine 3'-monophosphate

cytidine-3'-monophosphate

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosine

xanthosine

guanosine

inosine

uridine

cytidine

D-gluconate

D-mannonate

D-altronate

L-gulonate

D-galactonate

L-idonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

3'-ketolactose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

kanamycin B

D-galactosylononitol

galactinol

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-sorbosone

D-glyceraldehyde

D-xylulose

D-ribulose

L-ribulose

L-sorbosone 2,6-lactone

L-sorbosone 1,4-lactone

keto-D-fructose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-galactosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-sorbitol

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

unsaturated gellan tetrasaccharide

glucosyl-(heptosyl)₃-glucosyluronate-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

α-Kdo-(2→6)-lipid IV_A

melibiose

sucrose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate

α-lactose

α,α-trehalose

maltohexaose

maltotetraose

maltopentaose

maltoheptaose

stachyose

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

XXLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

aldehydo-D-galacturonate

trans-3-hydroxycotinine-glucuronide

trans-3'-hydroxycotinine

salicylaldehyde

4-methylumbelliferone

scopoletin

coumarin

phytyl diphosphate

all-trans-retinol

all-trans-retinyl palmitate

oleanolate 3 β-D-glucuronoside

oleanolate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(3S)-linalool

(3R)-linalool

geranyl diphosphate

apo-4'-lycopenal

spirilloxanthin

α-carotene

δ-carotene

β-carotene

γ-carotene

all-trans-lycopene

spheroiden-2-one

spheroidene

all-trans-phytoene

15-cis-phytoene

all-trans phytofluene

all-trans neurosporene

methoxyneurosporene

1-hydroxyneurosporene

demethylspheroidene

echinenone

2,2'-dioxospirilloxanthin

2-oxospirilloxanthin

canthaxanthin

adonixanthin

adonirubin

3-hydroxyechinenone

(3S,3'S)-astaxanthin

zeaxanthin

β-cryptoxanthin

apo-4'-lycopenoate

erythromycin D

3-α-mycarosylerythronolide B

ferric-enterobactin complex

iron(III) dicitrate

erythronolide B

(S)-nicotine

betanidin quinone

betanidin

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-oleoyl-2-lyso-glycerone phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1,2-dibutyrin

1-oleoyl-sn-glycerol

tributyrin

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

sn-glycero-3-phospho-1-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

D-ononitol

hydroquinone

3,4-dihydroxyphenylglycolaldehyde

(R)-noradrenaline

(R)-adrenaline

dopamine

3,4-dihydroxyphenylglycol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

protocatechuate

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

3-(N-morpholino)propanal

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

(S)-lactaldehyde

(R)-lactaldehyde

acetaldehyde

formaldehyde

1-propanal

isobutanal

1-octanal

butan-1-al

menadione

diacetyl

4-hydroxyacetophenone

2',4,4',6'-tetrahydroxychalcone

a coenzyme-A group

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

salicylate

4-aminobenzoate

benzoate

(R)-pantoate

acetate

mycophenolate

orotate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

aldehydo-D-glucuronate

leukotriene-D4

leukotriene-E4

pristanate

butanoate

octanoate

decanoate

palmitate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

γ-linolenate

(3E,5Z)-tetradecadienoate

(15Z)-tetracosenoate

phytenate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(S)-lactate

(R)-glycerate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

chorismate

D-glucarate

succinate

fumarate

(S)-malate

4-tyrosol

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-hydroxybenzoate

benzene

coumarinate

(+)-taxifolin

6,7-dehydrobaicalein

baicalein

(2R,3S,4S)-leucopelargonidin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucodelphinidin

(+)-dihydrokaempferol

(+)-dihydromyricetin

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

tetraiodothyroacetate ether glucuronide

tetraiodothyroacetate

tetraiodothyroacetate ester glucuronide

triiodothyroacetate ester glucuronide

3,3',5-triiodothyroacetate

triiodothyroacetate ether glucuronide

L-thyroxine

2-phenylethylamine

tyramine

serotonin

N-acetyl-serotonin

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

demethylmenaquinol-7

menaquinol-8

menaquinol-7

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

normetanephrine

metanephrine

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

hydrogen cyanide

(indole-3-yl)acetonitrile

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FAD

FMN

riboflavin

FADH₂

FMNH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

sirohydrochlorin

cobyrinate

precorrin-2

cobalt-precorrin-4

cobalt-precorrin-3

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

adenosylcobalamin

cob(I)alamin

thiamine

nicotinamide

nicotinate

L-ascorbate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal

pyridoxine

pyridoxamine

coenzyme A

(R)-NADHX

(S)-NADHX

mycophenolic acid O-acyl-glucuronide

mycophenolic acid phenolic glucuronide

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

L-galactono-1,4-lactone

succinyl-CoA

acetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

malonyl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

γ-linolenoyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

2-methylacetoacetyl-CoA

3'-dephospho-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(2E,5Z)-tetradecenoyl-CoA

cis-geranyl-CoA

citronellyll-CoA

itaconyl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

estrone

17β-estradiol

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

4α-carboxy-4β-methyl-5α-cholesta-8-en-3β-ol

episterol

ergosta-5,7,24(28)-trien-3β-ol

4α-methyl-5α-cholesta-8-en-3-one

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

6-caprolactam

acetamide

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

betaine aldehyde

choline

betaine aldehyde hydrate

agmatine

spermidine

putrescine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

sulfate

molybdate

hydrogencarbonate

selenate

sulfite

nitrite

thiosulfate

superoxide

nitrate

selenide

selenite

hydrogensulfite

OH^-

phosphate

diphosphate

triphosphate

Fe³⁺

Zn²⁺

Cu²⁺

Fe²⁺

Hg²⁺

Mg²⁺

Co²⁺

ammonium

H⁺

K⁺

trimethyl sulfonium

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

N-acetyl-D-galactosamine 6-O-sulfate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

(2R)-3-sulfolactate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

methanethiol

thiocyanate

S-sulfanylglutathione

nitric oxide

hydroxyl radical

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-β-neuraminate 9-phosphate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

Hg⁰

chlorophyllide a

protochlorophyllide a

3,8-divinyl protochlorophyllide a

chlorophyll a

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

(Z,Z)-biliverdin-IX α

(Z,Z)-bilirubin-IX α

protoheme

N₂

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

adenosyl-cobinamide phosphate

adenosylcobyrate

cobalt-sirohydrochlorin

cobalt-factor III

ethylphosphate

DNA with lesion

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

cyanophycin primer

cyanophycin primer-L-aspartate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminobutanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol