an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

acetoacetate

CO₂

orotidine 5'-phosphate

glycerone phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

oxaloacetate

glycolate

ethanolamine

hydrogen peroxide

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

urea

L-β-lysine

phosphoenolpyruvate

coproporphyrinogen III

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

carboxyphosphate

carbamoyl phosphate

O-ureido-L-homoserine

L-arginino-succinate

canavaninosuccinate

L-canavanine

DNA without lesion

histidinol

histidinal

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

formate

acetyl phosphate

2-dehydropantoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

isopentenyl diphosphate

prenyl diphosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

γ-L-glutamyl 5-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(R)-4'-phosphopantothenate

(R)-pantothenate

urocanate

4-imidazolone-5-propanoate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

(2-hydroxyphenyl)acetate

homogentisate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

citrate

3-deoxy-D-arabino-heptulosonate 7-phosphate

S-ribosyl-L-homocysteine

xanthine

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

tartronate semialdehyde

N-acetyl-D-muramate 6-phosphate

1,6-anhydro-N-acetyl-β-muramate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

oxalate

(S)-2-amino-6-oxohexanoate

2,5-dihydroxypyridine

6-hydroxynicotinate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(S)-dihydroorotate

thiamine diphosphate

3-phosphonopyruvate

4'-phosphopantetheine

propanoyl phosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

nicotinate adenine dinucleotide

2-(α-hydroxyethyl)thiamine diphosphate

2-maleylacetate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(E)-4-coumaroyl-CoA

phloretin

pinocembrin chalcone

(lipoyl)adenylate

2-iminoacetate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(S)-4-hydroxy-2-oxopentanoate

4-amino-4-deoxychorismate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(R)-mevalonate

6-deoxyerythronolide B

hop-22(29)-ene

squalene

N-carbamoyl-2-oxoglycine

(S)-ureidoglycolate

dihydroxyacetone

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

(R)-1-aminopropan-2-ol

α-ribazole

α-ribazole 5'-phosphate

(R)-1-amino-2-propanol O-2-phosphate

5,6-dimethylbenzimidazole

salicyl alcohol

formamide

glutathionylspermidine

(2R,3S)-3-methylmalate

citraconate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

N-ethylammeline

deethylsimazine

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

L-histidinol phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

prephenate

3-dehydroquinate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

4-methyl-2-oxopentanoate

3-phosphooxypyruvate

3-dehydroshikimate

shikimate

3-mercaptopyruvate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

porphobilinogen

preuroporphyrinogen

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3'-phosphoadenylyl-sulfate

L-selenocystathionine

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

oxalosuccinate

ethylamine

N-ethylglycine

methylamine

7-carboxy-7-deazaguanine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

carbonic acid

3-hydroxypropanoate

6-aminohexanoate

6-aminohexanoate linear dimer

α-D-glucosamine 1-phosphate

O-acetyl-L-serine

quinolinate

5'-phosphoguanylyl(3'→5')guanosine

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

pimelate

2-amino-3-carboxymuconate-6-semialdehyde

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

hydrogen selenide

adipate

6-oxohexanoate

6-aminohexanoate cyclic dimer

2-oxoglutaramate

glutathione disulfide

dialurate

L-quinate

N-succinyl-L,L-2,6-diaminopimelate

oxamate

autoinducer 2

glutathioselenol

selenodiglutathione

4-oxoglutaramate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

aminoacetone

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-α-amino-ε-keto-pimelate

L-citrulline

L-cysteine

L-methionine

glycine

L-serine

L-aspartate

L-alanine

L-glutamine

L-lysine

L-glutamate

L-arginine

L-histidine

L-proline

L-tyrosine

L-phenylalanine

L-isoleucine

L-threonine

L-asparagine

L-tryptophan

L-leucine

L-valine

O-succinyl-L-homoserine

L-homocysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-canaline

L-ornithine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

L-homoserine

meso-diaminopimelate

L-aspartyl-4-phosphate

L-saccharopine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

sarcosine

N-carbamoyl-L-aspartate

L-threonine 3-O-phosphate

3-phospho-L-serine

L-cystathionine

L,L-diaminopimelate

L-isoglutamine

D-phenylalanine

D-alanine

D-glutamate

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

protocatechuate

2,3-dihydroxybenzoate

4-aminobenzoate

acetate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

orotate

allantoate

(S)-1-pyrroline-5-carboxylate

pristanate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

(2R,3S)-2-methylisocitrate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

propanoate

2-oxoglutarate

pyruvate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

phlorisovalerophenone

daunorubicin

erythromycin D

3-α-mycarosylerythronolide B

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

ferrichrome

enterobactin

iron(III) dicitrate

erythronolide B

betanidin quinone

betanidin

4-prenylphlorisovalerophenone

deoxycohumulone

deoxyhumulone

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

CDP-4-dehydro-6-deoxy-α-D-glucose

GDP-α-D-mannose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-β-L-mycarose

dTDP-D-desosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

arbutin-6-phosphate

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-ribopyranose

β-D-glucopyranose

α-D-glucopyranose

β-D-allopyranose

β-D-allofuranose

D-glyceraldehyde

α-L-arabinopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

keto-D-fructose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

D-mannitol 1-phosphate

hydroquinone

myo-inositol

1D-myo-inositol 3-monophosphate

ethanol

butan-1-ol

methanol

methylglyoxal

acetaldehyde

formaldehyde

butan-1-al

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

2,5-piperidinedione

menadione

caldariellaquinone

diacetyl

4-hydroxybenzoate

urate

6,7-dehydrobaicalein

baicalein

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

phenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6-isobutyl-4-hydroxy-2-pyrone

adenine

guanine

AMP

IMP

GMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dATP

dITP

dGTP

dGMP

dAMP

hypoxanthine

xanthosine

adenosine

inosine

guanosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

(6R)-4a-hydroxy-tetrahydrobiopterin

tetrahydromethanopterin

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-triphosphate

molybdopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

cyclic pyranopterin phosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

MoO₂-molybdopterin cofactor

reduced riboflavin

FMNH₂

FADH₂

riboflavin

FMN

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

thymine

preQ₁

isoguanine

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

CTP

UTP

dUMP

dTMP

UDP

CDP

dUTP

dUDP

dCDP

dTTP

dCTP

dTDP

dCMP

UMP

CMP

cytidine

uridine

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosylcobalamin

cobyrinate

sirohydrochlorin

precorrin-3A

precorrin-2

precorrin-4

precorrin-3B

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

precorrin-8x

precorrin-7

precorrin-6B

cobalt-precorrin-6A

cobalt-precorrin-5B

precorrin-6A

cobalt-precorrin-2

coenzyme A

(R)-lipoate

adenylo-succinate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

ppGpp

pppGpp

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5'-deoxy-5'-fluoroadenosine

glycine betaine

(S)-NADHX

(R)-NADHX

thiamine

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

cob(I)alamin

ethene

(indol-3-yl)acetate

(+)-7-epi-jasmonate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

cholate

glycocholate

acetyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

malonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

isovaleryl-CoA

dihydro-4-coumaroyl-CoA

CoA-disulfide

5-aminolevulinyl-CoA

(2R)-ethylmalonyl-CoA

(2S)-ethylmalonyl-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

3-hydroxypropanoyl-CoA

methylacrylyl-CoA

acryloyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

trans-dienelactone

cis-dienelactone

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

S-(hydroxymethyl)glutathione

glutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

thiocyanate

S-sulfanylglutathione

agmatine

spermidine

putrescine

spermine

N¹-acetylspermine

N-acetylputrescine

N¹-acetylspermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

sulfate

nitrate

tungstate

selenate

molybdate

hydrogencarbonate

nitrite

sulfite

OH^-

selenite

hydrogensulfite

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Zn²⁺

Mn²⁺

Mo²⁺

Ni²⁺

Fe²⁺

Co²⁺

Mg²⁺

ammonium

K⁺

Na⁺

H⁺

2-chloroacetate

(indole-3-yl)acetonitrile

hydrogen cyanide

preQ₀

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

Mg-protoporphyrin

uroporphyrinogen-I

siroheme

protoheme

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobyrate

adenosylcobinamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cob(III)yrinate a,c-diamide

cobalt-sirohydrochlorin

cob(I)inamide

adenosyl-cobinamide phosphate

phosphonoacetaldehyde

ethylphosphate

DNA with lesion