ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C12325

1,4-dihydroxy-2-naphthoate

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C13702

1-piperideine 6-carboxylate

C9431

1,2-dihydro-β-NADP

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C1010

ammonia

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C3290

4-oxalocrotonate

C446

5-hydroxyindole thiazolidine carboxylate

C3355

(3E)-2-oxopent-3-enoate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C435

bisorganyltrisulfane

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C12274

enol-phenylpyruvate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C11543

H2O

C15282

D-galactosamine-6-phosphate

C11932

N-acetyl-D-galactosamine 6-phosphate

C11604

thiamine diphosphate

C6444

oxaloacetate

C891

citrate

C3482

dihydroxyacetone

C13635

β-D-ribosylnicotinate

C11857

β-nicotinate D-ribonucleotide

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C10349

glycerone phosphate

C11930

N-acetylglutamyl-phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C1102

O-acetyl-L-serine

C13854

hydrogen selenide

C7865

urea

C933

L-canavanine

C1285

4-imidazolone-5-propanoate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C11539

xanthine

C12162

hydrogen peroxide

C11479

phosphoenolpyruvate

C3850

5-amino-6-(D-ribitylamino)uracil

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C3421

formate

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C928

CO2

C1196

S-methyl-5'-thioadenosine

C191

L-selenocystathionine

C15305

(2E,4Z)-2-hydroxymuconate

C13605

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

C1447

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

C13604

2-hydroxy-6-oxohepta-2,4-dienoate

C15304

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

C9422

nicotinate adenine dinucleotide

C1431

3-dehydroshikimate

C11653

shikimate

C11802

4'-phosphopantetheine

C1108

acetyl phosphate

C12494

N-acetyl-D-muramate 6-phosphate

C873

coproporphyrinogen III

C927

carbon monoxide

C2191

carbamoyl phosphate

C1268

(R)-4'-phosphopantothenate

C11800

(R)-pantothenate

C1325

4-amino-4-deoxychorismate

C1002

anthranilate

C11836

hydroxypyruvate

C11639

succinate semialdehyde

C1038

α-ribazole

C1036

α-ribazole 5'-phosphate

C15202

2-amino-2-deoxy-D-gluconate 6-phosphate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C12848

N5-carboxyaminoimidazole ribonucleotide

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C11976

2-methylbutanal

C13799

2-methylbutanol

C12102

isobutanol

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C13801

3-methylbutanal

C13800

3-methylbutanol

C8407

5-hydroxyindole acetaldehyde

C8399

5-hydroxytryptophol

C13798

2-phenylethanol

C8410

indole-3-glycol aldehyde

C8344

indole-3-glycol

C1353

3-phosphooxypyruvate

C15327

2,5-diaminohexanoate

C14218

L-β-lysine

C15181

(S)-5-amino-3-oxohexanoate

C623

(3S,5S)-3,5-diaminohexanoate

C11832

orotidine 5'-phosphate

C12352

(S)-dihydroorotate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C11760

prephenate

C11654

selenophosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C6361

acetoacetate

C1433

3-dehydrocarnitine

C1528

2-dehydropantoate

C13647

biuret

C4883

2-oleoylglycerol

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C3350

2-oxoadipate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C11838

2-succinylbenzoate

C15056

salicyl alcohol

C12218

α-D-glucosamine 1-phosphate

C6597

3-ureidopropanoate

C12176

histidinol

C12178

histidinal

C2580

methylsalicylate

C1538

2-C-methyl-D-erythritol 4-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C2586

(E)-4-coumaroyl-CoA

C11946

N-(5-phosphoribosyl)-anthranilate

C8191

5-dehydro-2-deoxy-D-gluconate 6-phosphate

C8210

5-dehydro-2-deoxy-D-gluconate

C11560

UDP-N-acetyl-α-D-glucosaminouronate

C3376

(S)-4-hydroxy-2-oxohexanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C6574

(S)-ureidoglycolate

C3262

3-methyl-2-oxobutanoate

C3417

(S)-3-methyl-2-oxopentanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C11557

urocanate

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C1096

acrylate

C1098

acrylamide

C8366

(indol-3-yl)acetamide

C11756

propionamide

C1156

6-hydroxynicotinate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C12044

L-histidinol phosphate

C14924

carboxyphosphate

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C12056

L-arginino-succinate

C12164

H2

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C15014

N-acetyl-L,L-2,6-diaminopimelate

C12369

3-dehydroquinate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11652

shikimate 3-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C3319

4-methyl-2-oxopentanoate

C11690

S-acetyldihydrolipoamide

C12333

dihydrolipoamide

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13946

5-(methylsulfanyl)-α-D-ribose

C1130

8-amino-7-oxononanoate

C13950

pimeloyl-CoA

C15208

2,5-hexanedione

C15207

(2S,5S)-hexanediol

C3259

2-oxovalerate

C506

3-ethylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C14467

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

C939

butanoyl phosphate

C13879

(R)-mevalonate diphosphate

C13985

(R)-5-phosphomevalonate

C11826

oxalosuccinate

C12315

5,6-dimethylbenzimidazole

C12048

γ-L-glutamyl 5-phosphate

C5558

S-methyl-5'-thioinosine

C12031

S-Inosyl-L-homocysteine

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C11715

quinolinate

C3656

D-gluconate 6-phosphate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11693

(indol-3 yl)acetyl-CoA

C8333

(indol-3-yl)pyruvate

C12125

imidazole acetol-phosphate

C12029

S-ribosyl-L-homocysteine

C12139

preuroporphyrinogen

C11767

porphobilinogen

C3269

(S)-4-hydroxy-2-oxopentanoate

C3279

2-oxopent-4-enoate

C574

2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate

C1391

3-mercaptopyruvate

C1555

(S)-2,3-dihydrodipicolinate

C11754

propanoyl phosphate

C12230

formamide

C12409

creatinine

C13552

dimethylthiophosphate

C12342

diethylphosphate

C12340

diethylthiophosphate

C12016

(lipoyl)adenylate

C12390

D-erythro-imidazole-glycerol-phosphate

C1688

phloretin

C13817

pinocembrin chalcone

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C3344

2-dehydro-3-deoxy-D-gluconate

C13627

DNA without lesion

C12407

crotonate

C1078

(S)-2-amino-6-oxohexanoate

C1024

aminoacetone

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C11483

glycolate

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C12104

2-methylpropanoyl phosphate

C12098

isobutanoate

C11964

(R)-mevalonate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C12096

isochorismate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C1112

ManNAc-GlcNAc-PP-undecaprenol

C4676

glutathionylspermidine

C106

(2Z,2E)-2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate

C13485

(2Z,2E)-2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate

C102

2,6-dioxo-6-phenylhexa-3-enoate

C13487

2,2',3-trihydroxybiphenyl

C107

2,2',3,3'-tetrahydroxybiphenyl

C11743

pyrogallol

C13909

CDP-glycerol

C12756

(2R)-2-amino-4-oxopentanoate

C1457

(2R,4S)-2, 4-diaminopentanoate

C1223

5-aminopentanoate

C3338

2-oxoglutaramate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C4674

glutathione disulfide

C12324

autoinducer 2

C12105

propan-2-ol

C10994

thiamine

C10988

riboflavin

C10982

nicotinate

C10996

nicotinamide

C10966

all-trans-retinol

C11515

L-carnitine

C5221

adenosylcobalamin

C9874

cob(I)alamin

C10143

menadione

C4210

pyridoxal 5'-phosphate

C10597

7,8-dihydrofolate monoglutamate

C14603

tetrahydromethanopterin

C14624

5,10-methylene-tetrahydromethanopterin

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C12545

ethene

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C6218

(+)-7-epi-jasmonate

C5298

acetyl-CoA

C5304

(3S)-citryl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C4937

3'-dephospho-CoA

C4901

succinyl-CoA

C4927

(E)-glutaconyl-CoA

C5092

(3R)-hydroxy-5-trans-dodecenoyl-CoA

C5096

(2E,5E)-dodeca-2,5-dienoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5102

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

C5104

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C4913

malonyl-CoA

C5246

sulfoacetyl-CoA

C5306

3-methylcrotonyl-CoA

C4920

isovaleryl-CoA

C4922

isobutanoyl-CoA

C4899

3-methylglutaconyl-CoA

C5296

acryloyl-CoA

C5309

3-hydroxypropanoyl-CoA

C4981

CoA-disulfide

C5314

2-methylacetoacetyl-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C5250

dihydro-4-coumaroyl-CoA

C5061

(2R)-ethylmalonyl-CoA

C4953

(2S)-ethylmalonyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C11398

(E)-cinnamoyl-CoA

C1337

crotonyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C5635

oleoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C6562

hexadecanedioyl-CoA

C5651

palmitoleoyl-CoA

C5885

stearoyl-CoA

C5637

cis-vaccenoyl-CoA

C5892

palmitoyl-CoA

C5890

myristoyl-CoA

C491

18-hydroxyoleoyl-CoA

C14674

lauroyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C1179

pentanoyl-CoA

C7162

cerotoyl-CoA

C11195

18-hydroxylinoleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7169

2-carboxy-cerotoyl-CoA

C3727

all-trans-retinyl palmitate

C10393

1-oleoyl-sn-glycerol

C4606

S-(hydroxymethyl)glutathione

C4768

3-(methylsulfanyl)propanal

C4704

methionol

C4678

glutathione

C8865

3-sulfocatechol

C7994

(2R)-phospho-3-sulfolactate

C12623

sulfoacetaldehyde

C12637

3-sulfopyruvate

C12587

L-cysteate

C4180

sulfoacetate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C3998

methanethiol

C3812

3-(methylsulfanyl)propanoate

C3978

thiocyanate

C4644

S-sulfanylglutathione

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C9077

(2E,6E)-farnesyl diphosphate

C8965

hydroxyl radical

C8958

superoxide

C7025

OH-

C7034

hydrogensulfite

C7024

thiosulfate

C7016

sulfite

C7028

nitrite

C7036

hydrogencarbonate

C7022

selenide

C7057

molybdate

C6762

phosphonate

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7006

chloride

C7864

Fe3+

C11019

Ca2+

C10999

Cd2+

C11023

Fe2+

C11005

Zn2+

C4328

ammonium

C4320

H+

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C11510

5-chloro-5-deoxy-D-ribonate

C11281

2-chloroacetate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C7306

5'-deoxy-5'-fluoroadenosine

C12862

4-nitrophenol

C12858

paraoxon

C12856

parathion

C10301

agmatine

C3548

putrescine

C3574

spermidine

C3576

cadaverine

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C13354

preQ0

C13422

hydrogen cyanide

C13366

(indole-3-yl)acetonitrile

C6287

2-octaprenylphenol

C6601

(S)-ureidoglycine

C6617

N-acetyl-D-mannosamine 6-phosphate

C2017

α-D-glucosamine 6-phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C7118

hydrogen sulfide

C7121

oxygen

C7662

uroporphyrinogen-I

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C6624

protoheme

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C1218

adenosylcobalamin 5'-phosphate

C9830

adenosylcobinamide-GDP

C9855

adenosyl-cobinamide phosphate

C9861

cobyrinate

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9871

cobalt-precorrin-5A

C9847

cobalt-precorrin-4

C2255

N2

C12247

L-homocysteine

C10799

DNA with lesion

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C1328

L-cysteinylglycine

C1248

L-alanyl-L-glutamate

C1264

L-alanyl-D-glutamate

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C11520

hypoglycin B

C3536

L-α-amino-ε-keto-pimelate

C3530

L-2-aminoadipate

C5032

carbamate

C12165

2-hydroxy-5-oxoproline

C12063

seleno-L-homocysteine

C12073

L-aspartyl-4-phosphate

C12201

L-2-amino-3-oxobutanoate

C12065

L-saccharopine

C11955

O-acetyl-L-homoserine

C4412

S-(2E,6E)-farnesyl-L-cysteine

C10821

trans-4-hydroxy-L-proline

C6532

(2S, 3S)-3-methylaspartate

C3628

sarcosine

C3402

3-phospho-L-serine

C13320

N-carbamoylglycine

C14973

N-acetyl-L-glutamate

C15000

N-acetyl-L-ornithine

C14988

N-acetyl-L-citrulline

C5473

L-2-acetamido-6-oxoheptanedioate

C5466

N-formimino-L-glutamate

C13322

N-carbamoyl-L-aspartate

C5612

L-cysteine

C5583

L-methionine

C5607

L-glutamate

C5609

L-glutamine

C5584

L-lysine

C5592

L-selenocysteine

C5575

L-tryptophan

C12231

L-ornithine

C5642

L-arginine

C5581

L-proline

C5577

L-threonine

C5595

L-cystathionine

C5579

L-serine

C5596

L-aspartate

C5597

L-alanine

C2469

L-phenylalanine

C5580

L,L-diaminopimelate

C5603

L-isoleucine

C5643

L-asparagine

C5605

L-histidine

C5571

L-valine

C5573

L-tyrosine

C5588

L-leucine

C5599

L-norvaline

C8799

D-alanine

C8797

D-glutamate

C8807

D-lysine

C12223

D-ornithine

C8796

D-proline

C12067

glycine

C11444

N-carbamoylsarcosine

C11443

creatine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C12303

L-citrulline

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C2426

S-sulfo-L-cysteine

C12237

L-canaline

C12239

L-aspartate 4-semialdehyde

C12261

hypoglycin A

C12245

L-homoserine

C12263

1-aminocyclopropane-1-carboxylate

C12229

O-phospho-L-homoserine

C12233

L-glutamate-5-semialdehyde

C12227

O-succinyl-L-homoserine

C9505

L-allo-threonine

C5585

meso-diaminopimelate

C6697

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

C3428

UDP-N-acetyl-α-D-galactosaminouronate

C3415

laurate

C3387

stearate

C3383

palmitate

C3418

butanoate

C3419

pentanoate

C15254

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

C1646

13-sophorosyloxydocosanoate 6',6''-diacetate

C2005

sophorosyloxydocosanoate

C13210

oleate

C6163

leukotriene-D4

C6165

leukotriene-E4

C3512

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

C3510

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C3514

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C3119

1,2-dicis-vaccenoyl-phosphatidate

C3542

1-palmitoyl-2-cis-vaccenoyl phosphatidate

C11212

(R)-3-hydroxybutanoate

C6185

(R)-lactate

C6186

(S)-lactate

C3420

propanoate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3308

pyruvate

C3351

glyoxylate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3345

3-phenyl-2-oxopropanoate

C8555

cis-homoaconitate

C8538

(2R)-homocitrate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C5463

3-(carbamoylamino)-2-methylpropanoate

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C11429

salicylate

C11409

2,3-dihydroxybenzoate

C8974

4-aminobenzoate

C8968

benzoate

C11503

5-deoxy-D-glucuronate

C11517

acetate

C11481

orotate

C11482

(R)-pantoate

C7685

allantoate

C4985

(S)-1-pyrroline-5-carboxylate

C2137

D-tagaturonate

C2021

aldehydo-D-galacturonate

C7869

acetamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C9539

(S)-(+)-allantoin

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C3826

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

C3816

1,2-dimyristoyl-sn-glycerol 3-phosphate

C3822

1-palmitoyl-2-myristoyl phosphatidate

C3117

dioleoyl phosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C6242

1-cis-vaccenoyl-sn-glycerol-3-phosphate

C6240

1-palmitoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C6239

1-myristoyl-sn-glycerol 3-phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C5778

dimeric urushiol peroxide

C5781

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

C668

iron(III) dicitrate

C666

ferric-enterobactin complex

C4815

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

C4817

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

C4655

coumarin

C3675

D-altronate

C4086

1-(β-D ribofuranosyl)nicotinamide

C15403

a (1→4)-β-D-mannooligosaccharide

C10693

sucrose

C10737

β-D-mannosyl-(1→4)-D-glucose

C7609

β-D-mannopyranosyl-(1→4)-β-D-mannopyranose

C6823

α,α-trehalose

C6899

stachyose

C5727

raffinose

C3731

glycerol

C6569

D-sorbitol

C6571

L-iditol

C8835

β-D-fructofuranose

C6134

α-L-rhamnopyranose

C6133

β-L-rhamnopyranose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C5286

N-acetyl-β-D-glucosamine

C13570

N-acetyl-β-D-mannosamine

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5458

keto-L-sorbose

C2012

keto-D-fructose

C2063

β-D-ribopyranose

C2108

β-D-galactopyranose

C2109

α-D-galactopyranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C9494

D-glyceraldehyde

C2061

α-D-ribofuranose

C2858

glycolaldehyde

C7089

keto-L-rhamnulose

C2143

D-xylulose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10331

salicin 6-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C10334

arbutin-6-phosphate

C8666

UDP-α-D-galactose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C8817

L-rhamnulose 1-phosphate

C8819

L-fuculose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C8815

α-D-galactose 1-phosphate

C8813

α-D-mannose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2116

β-D-galactose 6-phosphate

C2115

α-D-galactose 6-phosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C10323

D-tagatofuranose 6-phosphate

C10330

6-deoxy-5-ketofructose 1-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6671

N,N'-diacetylchitobiose 6'-phosphate

C6669

N-monoacetylchitobiose 6'-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C973

D-ribulose-1,5-bisphosphate

C10368

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10366

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

C10360

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

C10375

a mature peptidoglycan(n) (meso-DAP containing)

C10377

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

C10358

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C358

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C355

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1939

dTDP-α-D-glucose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1930

dTDP-β-L-rhamnose

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7780

UDP-α-D-glucose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7790

UDP-N-acetyl-α-D-mannosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C7444

UDP-N-acetyl-α-D-glucosamine

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C975

GDP-α-D-perosamine

C2903

hydroquinone

C2770

4-methylcatechol

C2764

3-methylcatechol

C2768

catechol

C2758

3,4-dihydroxyphenylglycolaldehyde

C2763

3,4-dihydroxyphenylglycol

C2761

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

C10525

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

C10522

scyllo-inosose

C14807

phytol

C3450

ethanol

C3447

propan-1-ol

C3449

butan-1-ol

C3448

methanol

C2824

(2E,6E)-farnesal

C2817

hydroxypyruvaldehyde phosphate

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C6246

(S)-lactaldehyde

C3500

acetaldehyde

C3494

isobutanal

C3523

1-propanal

C3483

formaldehyde

C3485

butan-1-al

C14804

phytenal

C6090

methylglyoxal

C2040

diacetyl

C2028

acetone

C15317

2',4,4',6'-tetrahydroxychalcone

C2542

isoliquiritigenin

C10048

caldariellaquinone

C7139

4-tyrosol

C6918

cyanuric acid

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C6934

4-hydroxybenzoate

C3093

urate

C7051

2,2'-dihydroxybiphenyl

C12836

phenol

C12814

4-aminophenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C3475

methyl parathion

C3477

amino-parathion

C8490

3-methoxy-4-hydroxyphenylglycol

C2133

6-isobutyl-4-hydroxy-2-pyrone

C2569

coumarinate

C2915

menadiol

C1869

caldariellaquinol

C9454

adenine

C9455

guanine

C7795

GDP

C7757

ADP

C7817

IDP

C7809

AMP

C7811

XMP

C7827

GMP

C7741

IMP

C7844

ATP

C7745

GTP

C7759

ITP

C7807

dGDP

C7823

dADP

C7747

dIDP

C7743

dAMP

C7840

dGMP

C7751

dGTP

C7783

dATP

C7749

dITP

C7785

hypoxanthine

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7755

2'-deoxyinosine

C12742

7,8-dihydrolumazine

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C10050

FADH2

C10049

FMNH2

C15044

reduced riboflavin

C10053

FAD

C10052

FMN

C12708

7,8-dihydroneopterin 3'-phosphate

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12702

cyclic pyranopterin phosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12714

7,8-dihydropterin

C12668

molybdopterin adenine dinucleotide

C12718

molybdopterin

C6006

adenylyl molybdenum cofactor

C6007

MoO2-molybdopterin cofactor

C6009

bis(guanylyl molybdopterin) cofactor

C6000

bis(molybdenum cofactor)

C6003

guanylyl molybdenum cofactor

C10609

7,8-dihydropteroate

C2001

hydantoin

C2311

precorrin-2

C2305

precorrin-1

C2297

precorrin-8x

C2323

precorrin-7

C2317

precorrin-6B

C9540

preQ1

C7649

isoguanine

C8739

uracil

C10601

thymine

C8770

dUMP

C8755

dCMP

C8720

dTDP

C8744

dTMP

C8714

UDP

C8760

UTP

C8733

dCDP

C8732

CDP

C8764

dTTP

C8772

dCTP

C8724

dUTP

C8761

CTP

C4012

5,6-dihydrouracil

C7801

5,6-dihydrothymine

C8752

dUDP

C8741

dipicolinate

C2706

uridine

C2702

cytidine

C2519

thymidine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C2241

UMP

C2245

CMP

C10614

coenzyme A

C10611

(R)-lipoate

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C5552

5'-deoxyadenosine

C10267

pppGpp

C10266

ppGpp

C10288

adenylo-succinate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7652

cyclic-AMP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C1817

cyclic di-3',5'-guanylate

C1816

cyclic di-3',5'-adenylate

C4020

NAD+

C4018

NADP+

C14500

NADH

C14497

NADPH

C14494

(S)-NADPHX

C14491

(R)-NADPHX

C5392

(S)-NADHX

C5394

(R)-NADHX