an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

1-pyrroline

xanthine

histidinol

N⁵-carboxyaminoimidazole ribonucleotide

(2S)-lactyl-2-diphospho-5'-guanosine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(S)-2,3,4,5-tetrahydrodipicolinate

salicyl alcohol

D-gluconate 6-phosphate

2-dehydropantoate

nicotinate adenine dinucleotide

4-hydroxy-2-nonenal

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(2R,3S)-3-methylmalate

citraconate

L-canavanine

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

N-isopropylammelide

hydroxyatrazine

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-ureidoglycolate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

5-methylcytosine

2-hydroxy-5-carboxymethylmuconate semialdehyde

isoquinolin-2(1H)-one

isoquinoline

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

gallate

digallate

3-ureidopropanoate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

β-D-fructose 2,6-bisphosphate

3-α(S)-strictosidine

tryptamine

secologanin

N-Formyl-L-kynurenine

3-hydroxyanthranilate

oxalate

5-amino-6-(D-ribitylamino)uracil

3-hydroxypropanoate

4-methylsalicylate

5-methylsalicylate

coproporphyrinogen III

(S)-5-amino-3-oxohexanoate

hexulose 6-phosphate

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

DNA without lesion

5-dehydro-D-gluconate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

2-pyrone-4,6-dicarboxylate

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

5-enolpyruvoyl-shikimate 3-phosphate

muconolactone

3-methylmuconolactone

cis,cis-muconate

(R)-mandelate

(S)-mandelate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

aminoacetone

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

S-(hydroxymethyl)mycothiol

methylsalicylate

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

5-hydroxyindole thiazolidine carboxylate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

(3E)-2-oxopent-3-enoate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

carbamoyl phosphate

shikimate 3-phosphate

2-methyl-4-chlorophenol

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

3-(4-deoxy-β-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

nicotine-1'-N-oxide

2,6-dioxo-6-phenylhexa-3-enoate

6-phospho D-glucono-1,5-lactone

acetyl phosphate

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

3-methoxy-4-hydroxyphenylglycolaldehyde

5-methoxyindoleacetaldehyde

5-methoxytryptamine

4-acetamidobutanal

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetaldehyde

2-hydroxy-7-methyl-6-oxo-2,4-octadienoate

2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate

hydroxypyruvate

carboxyphosphate

L-β-lysine

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

ε-caprolactone

cyclohexanone

S-Inosyl-L-homocysteine

12-α-hydroxy-3 oxochola-4,6-dienoate

7-α,12-α-dihydroxy-3-oxochol-4-enoate

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

selenophosphate

(L-seryl)adenylate

dethiobiotin

pimeloyl-CoA

mercuriphenyl acetate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

creatinine

hop-22(29)-ene

squalene

(R)-4-phosphopantoate

3-dehydroshikimate

3-dehydroquinate

shikimate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

deoxycholoyl-CoA

allopregnanolone

3-oxocholoyl-CoA

D-erythro-imidazole-glycerol-phosphate

histidinal

(lipoyl)adenylate

mycothione

5-guanidino-2-oxopentanoate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

(S)-4-hydroxy-2-oxohexanoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

propan-2-ol

vanillin

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

2-dehydro-3-deoxy-D-gluconate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

isopropylamine

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

formamide

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

autoinducer 2

S-ribosyl-L-homocysteine

2-dehydro-3-deoxy-D-galactonate 6-phosphate

H₂O

CO₂

succinate semialdehyde

phosphoenolpyruvate

α-D-glucosamine 1-phosphate

urea

citrate

oxaloacetate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

(R)-4'-phosphopantothenate

(R)-pantothenate

5-phospho-β-D-ribosylamine

4-amino-4-deoxychorismate

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

2-chloroethanol

1,2-dichloroethane

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

acetoacetate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

oxalosuccinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

preuroporphyrinogen

4-aminobutanoate

urocanate

4-imidazolone-5-propanoate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

glycerone phosphate

4'-phosphopantetheine

1-deoxy-L-glycero-tetrulose 4-phosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

isopentenyl diphosphate

(E)-3-(methoxycarbonyl)pent-2-enedioate

tartronate semialdehyde

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

3'-phosphoadenylyl-sulfate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

(S)-dihydroorotate

3-deoxy-D-arabino-heptulosonate 7-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

anthranilate

N-(5-phosphoribosyl)-anthranilate

L-histidinol phosphate

imidazole acetol-phosphate

quinolinate

β-nicotinate D-ribonucleotide

hydrogen peroxide

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

glutathione disulfide

3-oxopropanoate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

glycolate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

(2-hydroxyphenyl)acetate

homogentisate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

ethanolamine

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

2-ketocyclohexane-1-carbonyl-CoA

2-hydroxy-cyclohexane-1-carbonyl-CoA

isochorismate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

thiamine phosphate

ectoine

(2S)-4-acetamido-2-aminobutanoate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

2-C-methyl-D-erythritol 4-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

D-erythritol 4-phosphate

carbonic acid

5-oxo-L-proline

N-acetyl-D-muramate 6-phosphate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

2-aminoacetaldehyde

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-dehydro-3-deoxy-D-galactonate

(4-hydroxyphenyl)acetate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

orotidine 5'-phosphate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

chloroacetaldehyde

coenzyme F₃₉₀-A

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

prephenate

glutathionylspermidine

γ-L-glutamyl 5-phosphate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

2-maleylacetate

4-(3-methylbut-2-enyl)-L-tryptophan

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

porphobilinogen

1,4-dihydroxy-2-naphthoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

hydrogen selenide

glutathioselenol

selenodiglutathione

3-fumarylpyruvate

3-maleylpyruvate

glycine betaine

FADH₂

FAD

FMN

FMNH₂

caldariellaquinol

3-demethylubiquinol-10

3-demethylubiquinol-8

demethylmenaquinol-11

demethylmenaquinol-13

demethylmenaquinol-12

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-10

demethylmenaquinol-9

demethylmenaquinol-8

menaquinol-11

menaquinol-13

menaquinol-12

menaquinol-7

menaquinol-6

menaquinol-10

menaquinol-9

menaquinol-8

ubiquinol-10

ubiquinol-8

caldariellaquinone

NADP⁺

NAD⁺

NADPH

NADH

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

riboflavin

menadione

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

all-trans-retinol

androsterone

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

phenylacetate

campest-4-en-3-one

17-β-hydroxy-5-α-androstan-3-one

testosterone

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholest-dien-3-one

5-α-pregnane-3,20-dione

cholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

7α-hydroxy-5β-cholestan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

campest-4-en-3β-ol

5α-androstane-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

5β-cholestane-3α,7α,12α-triol

cholest-5-en-3-one

cholesterol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

3-dehydrocholate

cholate

deoxycholate

1,2-dibutyrin

tributyrin

phenylacetyl-CoA

(S)-3-aminobutanoyl-CoA

oxalyl-CoA

formyl-CoA

4-hydroxybenzoyl-CoA

3-hydroxypropanoyl-CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

choloyl-CoA

acryloyl-CoA

2-methylbutanoyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

malonyl-CoA

4-trans-undecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

(5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-cis-undecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

gentisyl-CoA

salicyl-CoA

benzoyl-CoA

dihomo γ-linolenoyl-CoA

isobutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

cis-vaccenoyl-CoA

palmitoyl-CoA

stearoyl-CoA

icosanoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

propanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

trans-dienelactone

cis-dienelactone

all-trans-retinyl palmitate

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

S-(hydroxymethyl)glutathione

S-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

3-sulfino-L-alanine

glutathione

3-sulfocatechol

sulfoacetaldehyde

taurine

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

mycothiol

deacetylmycothiol

methanethiol

thiocyanate

S-sulfanylglutathione

choline

betaine aldehyde

betaine aldehyde hydrate

3-amino-4-hydroxybenzaldehyde

3-amino-4-hydroxybenzoate

2-phenylethylamine

tyramine

serotonin

3-acetylamino-4-hydroxybenzaldehyde

3-acetylamino-4-hydroxybenzoate

spermidine

putrescine

N-acetylputrescine

4-aminobutanal

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

(2E,6E)-farnesyl diphosphate

pristanate

hydroxyl radical

superoxide

hydrogensulfite

sulfate

selenide

nitrate

OH^-

selenate

hydrogencarbonate

molybdate

sulfite

thiosulfate

selenite

phosphonate

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Mg²⁺

Hg²⁺

Mo²⁺

Co²⁺

Fe²⁺

ammonium

H⁺

K⁺

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

3-chloro-cis,cis-muconate

2-chloroacetate

4-chlorocatechol

5-chlorosalicylate

4-chlorosalicylate

2,5-dichlorophenol

5-chloro-3-methylcatechol

3,5-dichlorocatechol

2,4-dichlorophenol

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

N-acetyl-β-neuraminate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

4-nitrophenol

paraoxon

parathion

acrylonitrile

hydrogen cyanide

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

2-methoxy-6-(all-trans-octaprenyl)phenol

CMP-N-acetyl-β-neuraminate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

(R)-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-O-(α-D-glucopyranosyl)-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

hydrogen sulfide

oxygen

2-iminobutanoate

2-iminosuccinate

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoheme

cob(I)alamin

adenosylcobalamin

cob(I)yrinate a,c-diamide

cobalt-precorrin-6A

cobalt-precorrin-6B

cobyrinate

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

cob(II)yrinate a,c-diamide

(glutathion-S-yl)-4-hydroxy-2-nonenal

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

(S)-2-hydroxyglutarate

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

ethylphosphate

DNA with lesion

(S)-ureidoglycine

4-methylphenol

L-homocysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

L-kynurenine

L-α-amino-ε-keto-pimelate

carbamate

L-2-aminoadipate

D-nopaline

iminoarginine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

N-carbamoylglycine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

N-carbamoyl-L-aspartate

S-methyl-L-cysteine

2-methyl-L-tryptophan

3-phospho-L-serine

L-ornithine

L-tyrosine

L-isoglutamine

L-cysteine

L-methionine

L-tryptophan

L-serine

L-aspartate

L-threonine

L-glutamate

L-2,4-diaminobutanoate

L-glutamine

L,L-diaminopimelate

L-lysine

L-isoleucine

L-arginine

L-valine

L-leucine

L-alanine

L-proline

L-asparagine

L-phenylalanine

L-histidine

D-proline

D-arginine

D-ornithine

D-glutamate

D-alanine

glycine

N-carbamoylsarcosine

creatine

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-citrulline

L-canaline

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

O-phospho-L-homoserine

S-adenosyl-L-methionine

1-aminocyclopropane-1-carboxylate

L-homoserine

L-glutamate-5-semialdehyde

hypoglycin A

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

butanoate

palmitate

stearate

decanoate

octanoate

laurate

7-hydroxylaurate

arachidate

myristate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

di-homo-γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate

leukotriene-E4

leukotriene-D4

gentisate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

(S)-lactate

(R)-3-hydroxybutanoate

acetate

pyruvate

formate

propanoate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-oxoglutarate

2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

trans-aconitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

chorismate

(3E)-2-oxohex-3-enedioate

D-glucarate

α,ω-9Z-octadecenedioate

fumarate

succinate

maleate

(S)-malate

protocatechuate

salicylate

trans-cinnamate

vanillate

2,3-dihydroxybenzoate

benzoate

4-aminobenzoate

D-gluconate

allantoate

5-deoxy-D-glucuronate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-erythro-hex-4-enopyranuronate

4-deoxy-L-threo-hex-4-enopyranuronate

acetamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

6-aminopenicillanate

isopenicillin N

penicillin G

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

(S)-DNPA

5-deoxy-dihydrokalafungin

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

enterobactin

(S)-nicotine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

dihydrokalafungin

actinorhodin

actinorhodin intermediate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

L-idonate

D-galactonate

5-dehydro-4-deoxy-D-glucuronate

isoprimeverose

α,α-trehalose

maltopentaose

maltohexaose

maltotriose

maltotetraose

maltoheptaose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

arbutin-6-phosphate

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

UDP-α-D-galactose

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

GDP-α-D-glucose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

glycerol

D-mannitol

erythritol

β-D-fructofuranose

β-L-rhamnopyranose

α-L-rhamnopyranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

keto-D-fructose

β-D-galactopyranose

α-D-galactopyranose

α-D-xylopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-L-arabinopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

glycolaldehyde

keto-L-rhamnulose

D-ribulose

D-xylulose

L-ribulose

hydroxyquinol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

hydroquinone

3,4-dihydroxyphenylacetate

4-methylcatechol

3-methylcatechol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3,4-dihydroxyphenylglycolaldehyde

(R)-noradrenaline

(R)-adrenaline

dopamine

catechol

ethylene glycol

(R)-propane-1,2-diol

(S)-propane-1,2-diol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

sphingosine

sphingosine 1-phosphate

1-octanol

ethanol

methanol

benzaldehyde

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

(R)-lactaldehyde

(S)-lactaldehyde

1-propanal

formaldehyde

acetaldehyde

1-octanal

methylglyoxal

diacetyl

acetone

4-hydroxyacetophenone

3-methyl-6-methoxy-2-octaprenyl-1,4-benzoquinone

6-methoxy-2-all-trans-octaprenyl-1,4-benzoquinone

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

benzene

cyanuric acid

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

4-aminophenol

phenol

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

normetanephrine

metanephrine

atrazine

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

cyclic pyranopterin phosphate

molybdopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropteroate

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

adenine

guanine

inosine

guanosine

xanthosine

adenosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

AMP

XMP

IMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dIDP

dGDP

dADP

dITP

dGTP

dATP

dAMP

dGMP

hypoxanthine

hydantoin

precorrin-3B

precorrin-3A

precorrin-4

precorrin-5

precorrin-7

precorrin-6B

precorrin-6A

precorrin-2

precorrin-1

precorrin-8x

thymine

cytosine

uracil

isoguanine

N¹-methyladenine

N3-methylcytosine

N¹-ethyladenine

5,6-dihydrothymine

5,6-dihydrouracil

dTMP

dUMP

dTDP

CDP

dCDP

UDP

dUDP

UTP

CTP

dUTP

dCMP

dCTP

dTTP

CMP

UMP

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

5-fluorouracil

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-0

oxidized coenzyme F₄₂₀-2

ppGpp

pppGpp

8-oxo-dGMP

8-oxo-dGTP

8-oxo-GMP

8-oxo-GTP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

cyclic-AMP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorocytosine

2-hydroxy-dATP

5-hydroxy-CMP

5-hydroxy-CTP

cyclic di-3',5'-guanylate

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA