an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

carbamoyl phosphate

CO₂

nicotinate adenine dinucleotide

phosphoenolpyruvate

L-selenocystathionine

3-mercaptopyruvate

urocanate

4-imidazolone-5-propanoate

N-acetyl-L-glutamate 5-semialdehyde

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

L-canavanine

canavaninosuccinate

L-arginino-succinate

prephenate

L-histidinol phosphate

imidazole acetol-phosphate

(E)-3-(methoxycarbonyl)pent-2-enedioate

2-aminoacetaldehyde

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

acetoacetate

oxaloacetate

5-aminolevulinate

N-acetylglutamyl-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

glycerone phosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

D-gluconate 6-phosphate

5-dehydro-D-gluconate

5-methylcytosine

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

hydroxypyruvate

4-maleyl-acetoacetate

homogentisate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

tartronate semialdehyde

γ-L-glutamyl 5-phosphate

4-methyl-2-oxopentanoate

6-phospho D-glucono-1,5-lactone

anthranilate

citrate

oxalosuccinate

3-dehydroshikimate

shikimate

5-dehydro-4-deoxy-D-glucarate

urea

acetyl phosphate

3-deoxy-D-glycero-2,5-hexodiulosonate

quinolinate

β-nicotinate D-ribonucleotide

shikimate 3-phosphate

5-phospho-β-D-ribosylamine

α-D-glucosamine 1-phosphate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

oxalate

O-ureido-L-homoserine

2,5-didehydro-D-gluconate

2-keto-D-gluconate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

N6'-acetylkanamycin-B

4-methylsalicylate

5-methylsalicylate

hydrogen peroxide

4-hydroxy-2-nonenal

(S)-dihydroorotate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

3-dehydroquinate

5-enolpyruvoyl-shikimate 3-phosphate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

xanthine

4-pyridoxolactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

adenosine 5'-phosphoselenate

4-fumaryl-acetoacetate

(S)-2-amino-6-oxohexanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

5-oxo-L-proline

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

β-D-ribosylnicotinate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

acrylamide

propionamide

butyramide

(indol-3-yl)acetamide

glycolate

creatinine

2-dehydropantoate

(R)-pantothenate

5-amino-6-(D-ribitylamino)uracil

N¹-(5-phospho-β-D-ribosyl)glycinamide

lipid IV_A

lipid A disaccharide (E. coli)

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

5-hydroxytryptophol glucuronide

5-hydroxytryptophol

cotinine-glucuronide

cotinine

L-thyroxine acyl β-D-glucuronide

N-acetyl-serotonin glucuronide

L-thyroxine phenolic β-D-glucuronide

nicotine-glucuronide

3-deoxy-D-arabino-heptulosonate 7-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

L-β-lysine

(2R,3S)-3-methylmalate

citraconate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

8-amino-7-oxononanoate

pimeloyl-CoA

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

ethanolamine

(R)-mandelate

(S)-mandelate

isoquinolin-2(1H)-one

isoquinoline

D-erythro-imidazole-glycerol-phosphate

coproporphyrinogen III

N-acetyl-D-muramate 6-phosphate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-maleylacetate

2-arylpropanoate

2-aryl-2-methylmalonate

S-formylglutathione

selenophosphate

6-amino-2-oxohexanoate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

hop-22(29)-ene

squalene

3-phosphonopyruvate

carbonic acid

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

dimethylamine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

histidinol

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

hydroxylamine

ammonia

glutathione disulfide

2-protocatechuoylphloroglucinolcarboxylate

dethiobiotin

porphobilinogen

1-deoxy-L-glycero-tetrulose 4-phosphate

thiamine phosphate

propanoyl phosphate

N-carbamoylputrescine

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

S-ribosyl-L-homocysteine

S-methyl-5'-thioadenosine

histidinal

3-deoxy-D-manno-octulosonate 8-phosphate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

7,8-diaminopelargonate

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

3-deoxy-α-D-manno-2-octulosonate

DNA without lesion

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-(5-phosphoribosyl)-anthranilate

lipid X

N²-succinylglutamate

(S)-5-amino-3-oxohexanoate

2,5-dioxopentanoate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

5-carboxymethyl-2-hydroxymuconate

L-gulono-1,4-lactone

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

carboxyphosphate

trans-O-hydroxybenzylidenepyruvate

preuroporphyrinogen

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

orotidine 5'-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(lipoyl)adenylate

6-hydroxynicotinate

6-oxo-1,4,5,6-tetrahydronicotinate

(S)-2-formylglutarate

(2-hydroxyphenyl)acetate

12α-hydroxy-3-oxocholan-24-oyl-CoA

deoxycholoyl-CoA

allopregnanolone

3-oxocholoyl-CoA

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

cis,cis-muconate

muconolactone

4-methyl-3-oxoadipate-enol-lactone

3-methylmuconolactone

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

N-Formyl-L-kynurenine

4-amino-4-deoxychorismate

D-galacto-hexodialdose

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

4-methyl-3-oxoadipate

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

quercitrin

7-carboxy-7-deazaguanine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-amino-3-carboxymuconate-6-semialdehyde

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

(S)-ureidoglycolate

autoinducer 2

3-hydroxypropanoate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

pyruvic oxime

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

acrylate

γ-butyrobetaine

hydrogen selenide

glutathioselenol

selenodiglutathione

protoanemonin

2-keto-L-gulonate

mercuriphenyl acetate

oxamate

N-carbamoyl-2-oxoglycine

4-oxoglutaramate

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

1-pyrroline

1-piperideine-2-carboxylate

5-aminopentanoate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

hypoglycin B

carbamate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-citrulline

L-arginine

L-glutamate

L-glutamine

L-serine

L-histidine

L-isoleucine

L-lysine

glycine

L-aspartate

L-phenylalanine

L-threonine

L-alanine

L-proline

L-leucine

L-valine

L-tryptophan

L-tyrosine

L-cysteine

L-methionine

L-ornithine

L-homocysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-canaline

O-succinyl-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

hypoglycin A

3-sulfino-L-alanine

1-aminocyclopropane-1-carboxylate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

seleno-L-homocysteine

L-saccharopine

L-aspartyl-4-phosphate

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

cis-4-hydroxy-D-proline

S-methyl-L-cysteine

sarcosine

N⁶,N⁶-dimethyl-L-arginine

3-phospho-L-serine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

L-cystathionine

L,L-diaminopimelate

S-trans-1-propenyl-L-cysteine

S-allyl-L-cysteine

L-isoglutamine

D-glutamate

D-alanine

D-lysine

D-aspartate

creatine

β-alanine

(R)-β-lysine

(S)-3-amino-2-methylpropanoate

3,5,3'-triiodo-L-thyronine

protocatechuate

salicylate

2,3-dihydroxybenzoate

4-aminobenzoate

D-gluconate

acetate

5-chloro-5-deoxy-D-ribonate

D-mannonate

allantoate

(R)-pantoate

mycophenolate

orotate

L-carnitine

5-deoxy-D-glucuronate

gentisate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

4-deoxy-L-threo-hex-4-enopyranuronate

aldehydo-D-galacturonate

pristanate

palmitate

stearate

decanoate

laurate

7-hydroxylaurate

octanoate

phytenate

(15Z)-tetracosenoate

oleate

linoleate

α-linolenate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

(S)-lactate

(R)-lactate

(R)-glycerate

pyruvate

propanoate

formate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxoglutarate

2-oxobutanoate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

3-oxoadipate

trans-aconitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

D-galactarate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

nicotinamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

6-aminopenicillanate

penicillin G

isopenicillin N

(S)-(+)-allantoin

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

α-Kdo-(2→6)-lipid IV_A

glucosyl-(heptosyl)₃-glucosyluronate-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

oleanolate 3 β-D-glucuronoside

oleanolate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

catechol

4-chlorocatechol

4-methylcatechol

enterobactin

myo-inositol

scyllo-inositol

1D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

glycerol

L-iditol

D-sorbitol

D-mannitol

ethanol

methanol

methylglyoxal

menadione

caldariellaquinone

diacetyl

acetone

glycolaldehyde

3-(N-morpholino)propanal

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-L-arabinopyranose

α-D-ribofuranose

β-L-rhamnopyranose

butan-1-al

acetaldehyde

formaldehyde

4-hydroxybenzoate

urate

7,8-dihydro-8-oxoguanine

benzene

quercetin

quercetin-3-glucoside

rutin

hesperidin

hesperitin-7-O-β-D-glucoside

prunin

naringin

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

menaquinol-8

ubiquinol-8

demethylmenaquinol-8

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

N-acetyl-serotonin

5-chlorosalicylate

4-chlorosalicylate

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

triiodothyroacetate ether glucuronide

3,3',5-triiodothyroacetate

tetraiodothyroacetate ether glucuronide

tetraiodothyroacetate

tetraiodothyroacetate ester glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

triiodothyroacetate ester glucuronide

L-thyroxine

4-nitrophenol

4-aminophenol

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

parathion

2-hydroxychromene-2-carboxylate

adenine

guanine

AMP

XMP

IMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dAMP

dGMP

dGTP

dITP

dATP

hypoxanthine

guanosine

adenosine

inosine

xanthosine

2'-deoxyguanosine

2'-deoxyinosine

2'-deoxyadenosine

7,8-dihydrolumazine

tetrahydromethanopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

thymine

uracil

cytosine

preQ₁

isoguanine

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

UTP

5,6-dihydrothymine

5,6-dihydrouracil

CDP

dCDP

UDP

dUDP

dUTP

dCTP

CTP

dTTP

dTDP

dUMP

dCMP

dTMP

CMP-N-acetyl-β-neuraminate

CMP

UMP

uridine

cytidine

2'-deoxyuridine

2'-deoxycytidine

thymidine

5-fluorouracil

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-tyvelose

CDP-α-D-paratose

CDP-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-β-L-iduronate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

adenosylcobalamin

cob(I)alamin

cobyrinate

sirohydrochlorin

cobalt-precorrin-6A

cobalt-precorrin-5B

precorrin-5

precorrin-4

precorrin-3A

precorrin-2

precorrin-8x

precorrin-7

precorrin-6B

cobalt-precorrin-2

precorrin-3B

precorrin-6A

precorrin-1

coenzyme A

(R)-lipoate

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-GMP

cyclic-AMP

5'-deoxyadenosine

ppGpp

pppGpp

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

NAD⁺

NADP⁺

NADH

NADPH

CMP-3-deoxy-β-D-manno-octulosonate

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

glycine betaine

(R)-NADHX

(S)-NADHX

androsterone

phenylacetate

(indol-3-yl)acetate

campest-4-en-3-one

17-β-hydroxy-5-α-androstan-3-one

testosterone

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

5-α-pregnane-3,20-dione

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

7α-hydroxy-5β-cholestan-3-one

7α,12α-dihydroxy-5β-cholestan-3-one

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

3-dehydrocholate

cholate

deoxycholate

methane

mycophenolic acid phenolic glucuronide

mycophenolic acid O-acyl-glucuronide

acetyl-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

succinyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

oxalyl-CoA

formyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

crotonobetainyl-CoA

L-carnitinyl-CoA

gentisyl-CoA

salicyl-CoA

(2R)-ethylmalonyl-CoA

(2S)-ethylmalonyl-CoA

isobutanoyl-CoA

(S)-3-aminobutanoyl-CoA

phenylacetyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

choloyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-methylglutaconyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

2-methylbutanoyl-CoA

γ-butyrobetainyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

phytanoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

decanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

octanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

trans-dienelactone

cis-dienelactone

D-galactono-1,4-lactone

D-glucono-1,5-lactone

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

taurine

3-sulfopyruvate

L-cysteate

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

ferrichrome

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

trans-3-hydroxycotinine-glucuronide

trans-3'-hydroxycotinine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

kanamycin B

(S)-nicotine

sulfite

hydrogencarbonate

selenate

nitrite

thiosulfate

selenide

molybdate

nitrate

OH^-

selenite

hydrogensulfite

sulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Hg²⁺

Mo²⁺

Fe²⁺

Ni²⁺

Zn²⁺

Co²⁺

ammonium

H⁺

K⁺

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxine

4-pyridoxate

2-chloroacetate

3-chloro-cis,cis-muconate

5-fluoro-5-deoxy-D-ribose 1-phosphate

N-acetyl-β-neuraminate

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

agmatine

putrescine

cadaverine

spermidine

N-acetylputrescine

4-aminobutanal

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

paraoxon

p-nitrophenyl-α-L-rhamnopyranoside

D-galactonate

L-gulonate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-arabinofuranose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

sucrose

α,α-trehalose

maltotetraose

maltohexaose

maltoheptaose

maltotriose

maltopentaose

stachyose

raffinose

β-D-fructofuranose

keto-D-fructose

keto-L-sorbose

D-xylulose

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-mannosamine

hydrogen cyanide

preQ₀

acrylonitrile

propionitrile

(indole-3-yl)acetonitrile

3-cyanopyridine

n-butyronitrile

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

Hg⁰

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

protoheme

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-sirohydrochlorin

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal