an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

oxamate

selenodiglutathione

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

pyrazine-2-carboxylate

L-tartrate

dehydroascorbate (bicyclic form)

2,5-dioxopentanoate

octadecanal

L-dehydro-ascorbate

2-hydroxy-5-carboxymethylmuconate semialdehyde

naphthalene-1,2-diol

(enterobacterial common antigen)-undecaprenyl diphosphate

glutathioselenol

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

dialurate

2-oxopent-4-enoate

1,2-dihydro-β-NADP

cyclic-2,3-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

2-carboxy-L-xylonolactone

(3E)-2-oxopent-3-enoate

2-carboxy-L-threo-pentonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

bisorganyltrisulfane

H₂O

phosphoenolpyruvate

5-amino-6-(D-ribitylamino)uracil

dethiobiotin

CO₂

7,8-diaminopelargonate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-4-amino-5-oxopentanoate

L-canavanine

canavaninosuccinate

L-arginino-succinate

tartronate semialdehyde

5-dehydro-4-deoxy-D-glucarate

S-ribosyl-L-homocysteine

5-aminolevulinate

citrate

S-acetyldihydrolipoamide

dihydrolipoamide

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

carboxyphosphate

carbamoyl phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

urea

3-deoxy-D-arabino-heptulosonate 7-phosphate

oxaloacetate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

anthranilate

3-demethylubiquinol-6

D-gluconate 6-phosphate

hydroxypyruvate

glycolate

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

α-D-glucosamine 1-phosphate

lipid A disaccharide (E. coli)

lipid X

2-C-methyl-D-erythritol 4-phosphate

N-succinyl-2-amino-6-ketopimelate

2,3-dioxo-L-gulonate

3-keto-L-gulonate

3-keto-L-gulonate 6-phosphate

4'-phosphopantetheine

xanthine

(S)-dihydroorotate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-dehydro-3-deoxy-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

3-keto-β-D-galactose

(R)-1-amino-2-propanol O-2-phosphate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

5-enolpyruvoyl-shikimate 3-phosphate

glycerone phosphate

dihydroxyacetone

glutathionylspermidine

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

thiamine diphosphate

thiamine phosphate

5-phospho-β-D-ribosylamine

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

selenophosphate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

O-acetyl-L-serine

5-dehydro-D-gluconate

hydrogen peroxide

N-(5-phosphoribosyl)-anthranilate

preuroporphyrinogen

porphobilinogen

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

nicotinate adenine dinucleotide

prephenate

S-adenosyl 3-(methylsulfanyl)propylamine

carbonic acid

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

hydrogen selenide

autoinducer 2

3'-phosphoadenylyl-sulfate

adenosine 3',5'-bisphosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(E)-3-(methoxycarbonyl)pent-2-enedioate

N⁵-carboxyaminoimidazole ribonucleotide

H₂

coproporphyrinogen III

L-selenocystathionine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

lipid IV_A

3-deoxy-α-D-manno-2-octulosonate

succinate semialdehyde

acetyl phosphate

propanoyl phosphate

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

S-formylglutathione

orotidine 5'-phosphate

glutathione disulfide

ethanolamine

salicyl alcohol

methylsalicylate

shikimate 3-phosphate

shikimate

3-dehydroquinate

5-methylcytosine

N-succinyl-L,L-2,6-diaminopimelate

N-acetyl-L-glutamate 5-semialdehyde

4-hydroxy-2-nonenal

3-oxopropanoate

3-hydroxypropanoate

N-ethylsuccinimide

N-ethylmaleimide

2-maleylacetate

(R)-pantothenate

2-dehydropantoate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-methylmalate

citraconate

creatinine

(S)-2,3-dihydrodipicolinate

O-ureido-L-homoserine

L-gulono-1,4-lactone

(R)-mandelate

(S)-mandelate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

5-phospho-α-D-ribose 1,2-cyclic phosphate

α-D-ribose-1-methylphosphonate 5-phosphate

DNA without lesion

(lipoyl)adenylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

5-oxo-L-proline

acetoacetate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

γ-L-glutamyl 5-phosphate

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

N-carbamoyl-2-oxoglycine

(S)-ureidoglycolate

urea-1-carboxylate

(R)-3-(phenyl)lactoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

mesaconate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

α-ribazole

1-deoxy-L-glycero-tetrulose 4-phosphate

(4-hydroxyphenyl)acetate

N-acetyl-D-muramate 6-phosphate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

4-amino-4-deoxychorismate

1,4-dihydroxy-2-naphthoate

N-acetylglutamyl-phosphate

(S)-5-amino-3-oxohexanoate

S-methyl-5'-thioadenosine

4-amino-2-methyl-5-pyrimidinemethanol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

2-iminoacetate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(indol-3-yl)pyruvate

(4Z)-2-oxohept-4-enedioate

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-3-oxosuccinate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

urocanate

3-dehydroshikimate

2-phosphoglycolate

meso-tartrate

4-aminobutanoate

(4S)-4-hydroxy-2-oxoheptanedioate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

methyloxaloacetate

2-keto-L-gulonate

quinolinate

γ-butyrobetaine

trans-O-hydroxybenzylidenepyruvate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

3-(2,3-dihydroxyphenyl)propanoate

3-(3-hydroxyphenyl)propanoate

7-carboxy-7-deazaguanine

sulfate

selenite

hydrogensulfite

hydrogencarbonate

molybdate

nitrate

thiosulfate

sulfite

selenate

tetrathionate

superoxide

selenide

OH^-

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Mg²⁺

Mo²⁺

Ni²⁺

Zn²⁺

Cd²⁺

Fe²⁺

Co²⁺

Cu²⁺

ammonium

H⁺

K⁺

5'-chloro-5'-deoxyadenosine

2-chloroacetate

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

5-chloro-5-deoxyribose 1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

salicylaldehyde

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

6-aminopenicillanate

penicillin G

isopenicillin N

all-trans-retinyl palmitate

all-trans-retinol

geranyl diphosphate

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

nicotinamide

riboflavin

nicotinate

L-ascorbate

thiamine

L-carnitine

menadione

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine 5'-phosphate

pyridoxine

pyridoxal 5'-phosphate

pyridoxal

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

4-nitrophenol

paraoxon

parathion

glycine betaine

betaine aldehyde

choline

agmatine

putrescine

spermidine

spermine

cadaverine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

hydrogen cyanide

preQ₀

D-altronate

D-mannonate

D-gluconate

L-gulonate

D-galactonate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

sucrose

α-lactose

maltohexaose

maltotetraose

maltopentaose

maltotriose

maltoheptaose

unsaturated gellan tetrasaccharide

stachyose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

raffinose

XXXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

aldehydo-D-galacturonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

N,N'-diacetyl-α-D-bacillosaminyl-diphospho-tri-trans,hepta-cis-undecaprenol

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

keto-L-sorbose 1-phosphate

D-tagatofuranose 6-phosphate

keto-L-tagatose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

erythrulose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

CMP-3-deoxy-β-D-manno-octulosonate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactose

UDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N,N'-diacetylbacillosamine

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-galactosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ADP-α-D-glucose

glycerol

D-sorbitol 6-phosphate

D-mannitol 1-phosphate

D-ribitol

D-arabinitol

4-deoxy-L-threo-hex-4-enopyranuronate

β-D-fructofuranose

β-L-rhamnopyranose

α-L-rhamnopyranose

keto-D-fructose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

β-D-allopyranose

β-D-allofuranose

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

glycolaldehyde

keto-L-rhamnulose

D-xylulose

D-ribulose

L-ribulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-galactosamine

N-acetyl-β-D-glucosamine

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(R)-citramalate

(S)-ureidoglycine

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-3-(phenyl)lactate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

hemin

siroheme

protoheme

cob(II)alamin

aquacobalamin

cob(I)alamin

adenosylcobalamin

adenosylcobyrate

cobalt-precorrin-3

cobalt-precorrin-2

cobalt-factor III

cobalt-sirohydrochlorin

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cobyrinate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6B

adenosylcobalamin 5'-phosphate

cobalt-precorrin-8

cobalt-precorrin-7

ethylphosphate

phenylacetate

4-methylphenol

L-homocysteine

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

hypoglycin B

L-α-amino-ε-keto-pimelate

carbamate

L-2-aminoadipate

L-aspartyl-4-phosphate

seleno-L-homocysteine

O-acetyl-L-homoserine

N-α-acetyl lysine methyl ester

trans-4-hydroxy-L-proline

(2S, 3S)-3-methylaspartate

sarcosine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-carbamoyl-L-aspartate

L-cysteine

L-methionine

L-arginine

L-glutamate

L-glutamine

L-isoleucine

L-aspartate

L-serine

L-ornithine

L-leucine

L-lysine

L-proline

L-asparagine

L-alanine

L-threonine

L-phenylalanine

L-valine

L-2,4-diaminobutanoate

L-tryptophan

L-cystathionine

L,L-diaminopimelate

L-histidine

L-selenocysteine

L-tyrosine

D-proline

D-alanine

D-glutamate

D-serine

D-aspartate

glycine

creatine

β-alanine

L-citrulline

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homoserine

O-succinyl-L-homoserine

S-sulfo-L-cysteine

L-glutamate-5-semialdehyde

hypoglycin A

O-phospho-L-homoserine

L-canaline

3-sulfino-L-alanine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

7-hydroxylaurate

laurate

octanoate

decanoate

acetate

pyruvate

formate

propanoate

(R)-lactate

(S)-lactate

pentanoate

butanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxobutanoate

2-oxoglutarate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

cis-aconitate

trans-aconitate

cis-2-methylaconitate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

chorismate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

D-glucarate

D-galactarate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

salicylate

trans-cinnamate

2,3-dihydroxybenzoate

4-aminobenzoate

orotate

(R)-pantoate

allantoate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

pristanate

(15Z)-tetracosenoate

sophorosyloxydocosanoate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

stearate

palmitate

phytenate

oleate

linoleate

α-linolenate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

pyrazinamide

(S)-(+)-allantoin

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

tri-trans,hepta-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

1-18:1-2-18:1-phosphatidylethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1,2-dipalmitoyl-sn-glycero-3-phosphocholine

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-palmitoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

(S)-lactaldehyde

formaldehyde

acetaldehyde

methylglyoxal

diacetyl

caldariellaquinone

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

naphthalene

4-hydroxybenzoate

urate

phenol

4-aminophenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

quercetin

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-10

3-demethylubiquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

ubiquinol-6

ubiquinol-10

ubiquinol-8

ubiquinol-9

ubiquinol-7

demethylmenaquinol-8

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3,4-dihydroxyphenylacetate

2-hydroxychromene-2-carboxylate

adenine

guanine

ADP

GDP

IDP

AMP

GMP

IMP

XMP

ATP

GTP

ITP

dGTP

dATP

dITP

dGDP

dADP

dIDP

dGMP

dAMP

hypoxanthine

guanosine

adenosine

xanthosine

inosine

2'-deoxyguanosine

2'-deoxyinosine

2'-deoxyadenosine

7,8-dihydrolumazine

reduced riboflavin

FMNH₂

FADH₂

FMN

FAD

6-carboxy-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydropterin

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

7,8-dihydropteroate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

sirohydrochlorin

precorrin-2

precorrin-1

precorrin-8x

preQ₁

isoguanine

uracil

cytosine

thymine

UDP

CDP

dCDP

dUDP

CTP

UTP

dUTP

dCTP

dTMP

dTTP

dCMP

dUMP

uridine 3'-monophosphate

cytidine-3'-monophosphate

dTDP

dipicolinate

5-fluorouracil

uridine

cytidine

2'-deoxyuridine

2'-deoxycytidine

UMP

CMP

coenzyme A

(R)-lipoate

8-oxo-GTP

8-oxo-dGTP

5'-deoxyadenosine

adenylo-succinate

pppGpp

ppGpp

guanosine 3'-monophosphate

adenosine 3'-monophosphate

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

5-fluorocytosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

(S)-NADHX

(R)-NADHX

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

heptadecane

methane

trans-dienelactone

cis-dienelactone

D-glucono-1,5-lactone

acetyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

malonyl-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

crotonobetainyl-CoA

L-carnitinyl-CoA

(S)-3-aminobutanoyl-CoA

γ-butyrobetainyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

propanoyl-CoA

pentanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

S-(hydroxymethyl)glutathione

3-sulfopyruvate

L-cysteate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

glutathione

thiocyanate

S-sulfanylglutathione

(R)-S-lactoylglutathione

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

ethanol

methanol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

monodehydroascorbate radical

nitric oxide

hydroxyl radical