an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

4-amino-2-methyl-5-pyrimidinemethanol

2-dehydropantoate

2-phosphoglycolate

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

5-carboxymethyl-2-hydroxymuconate

3-maleylpyruvate

4-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

N-acetylglutamyl-phosphate

1,4-dihydroxy-2-naphthoate

2-dehydro-3-deoxy-D-galactonate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

L-gulono-1,4-lactone

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

hexulose 6-phosphate

α-ribazole

S-methyl-5'-thioadenosine

(indol-3-yl)pyruvate

GMP-N-ε-(N-α-acetyl lysine methyl ester) 5'-phosphoramidate

(lipoyl)adenylate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

3-hydroxypropanoate

3-oxopropanoate

4-hydroxy-2-nonenal

N-acetyl-D-muramate 6-phosphate

4-amino-4-deoxychorismate

propanoyl phosphate

(R)-pantothenate

DNA without lesion

coproporphyrinogen III

H₂

5-dehydro-D-gluconate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

preuroporphyrinogen

glutathionylspermidine

urea

3-keto-L-gulonate 6-phosphate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

xanthine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

β-D-ribosylnicotinate

5-enolpyruvoyl-shikimate 3-phosphate

O-ureido-L-homoserine

selenophosphate

succinate semialdehyde

2-dehydro-3-deoxy-D-gluconate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

thiamine phosphate

thiamine diphosphate

tartronate semialdehyde

5-dehydro-4-deoxy-D-glucarate

dihydrolipoamide

S-acetyldihydrolipoamide

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

carboxyphosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-tartrate

adenosine 3',5'-bisphosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

(E)-3-(methoxycarbonyl)pent-2-enedioate

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

3-demethylubiquinol-6

D-gluconate 6-phosphate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

lipid IV_A

3-deoxy-α-D-manno-2-octulosonate

S-ribosyl-L-homocysteine

autoinducer 2

hydrogen selenide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N¹-(5-phospho-β-D-ribosyl)glycinamide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

carbonic acid

S-adenosyl 3-(methylsulfanyl)propylamine

prephenate

nicotinate adenine dinucleotide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

carbamoyl phosphate

lipid X

lipid A disaccharide (E. coli)

isopentenyl diphosphate

2-C-methyl-D-erythritol 4-phosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-acetyl-L-glutamate 5-semialdehyde

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

5-methylcytosine

3-dehydroquinate

shikimate

shikimate 3-phosphate

methylsalicylate

salicyl alcohol

ethanolamine

5-aminolevulinate

porphobilinogen

4-methylsalicylate

5-methylsalicylate

glutathione disulfide

glycerone phosphate

O-acetyl-L-serine

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

L-arginino-succinate

canavaninosuccinate

L-canavanine

orotidine 5'-phosphate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

glycolate

hydroxypyruvate

3-methyl-2-oxobutanoate

α-D-glucosamine 1-phosphate

5-phospho-β-D-ribosylamine

acetyl phosphate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

citrate

3-deoxy-D-arabino-heptulosonate 7-phosphate

dihydroxyacetone

oxaloacetate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

(S)-dihydroorotate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

7,8-diaminopelargonate

dethiobiotin

5-amino-6-(D-ribitylamino)uracil

hydrogen peroxide

anthranilate

N-(5-phosphoribosyl)-anthranilate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

phosphoenolpyruvate

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-4-amino-5-oxopentanoate

oxalosuccinate

CO₂

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

H₂O

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

octadecanal

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

2-maleylacetate

quinolinate

selenodiglutathione

glutathioselenol

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2,5-dioxopentanoate

γ-butyrobetaine

oxamate

dialurate

(R)-1-amino-2-propanol O-2-phosphate

2-keto-L-gulonate

2-iminoacetate

(S)-mandelate

(R)-mandelate

coenzyme F₃₉₀-A

(S)-5-amino-3-oxohexanoate

acetoacetate

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

(R)-3-(phenyl)lactoyl-CoA

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

meso-tartrate

2-hydroxy-3-oxosuccinate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

(S)-ureidoglycolate

N-carbamoyl-2-oxoglycine

5-oxo-L-proline

3-dehydroshikimate

urocanate

γ-L-glutamyl 5-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

2-pyrone-4,6-dicarboxylate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

citraconate

(2R,3S)-3-methylmalate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

L-selenocystathionine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

aquacobalamin

cob(II)alamin

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

hemin

adenosylcobyrate

cob(II)yrinate a,c-diamide

protoheme

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-III

siroheme

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(R)-3-(phenyl)lactate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

dTDP-4-amino-4,6-dideoxy-α-D-galactose

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

preQ₀

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

3-chloro-cis,cis-muconate

5-chlorosalicylate

4-chlorosalicylate

4-chlorocatechol

Fe³⁺

K⁺

H⁺

ammonium

Fe²⁺

Cd²⁺

Zn²⁺

Mo²⁺

Mg²⁺

Ni²⁺

Cu²⁺

selenide

tetrathionate

superoxide

selenate

nitrate

thiosulfate

sulfite

hydrogencarbonate

molybdate

sulfate

hydrogensulfite

OH^-

selenite

phosphate

triphosphate

diphosphate

chloride

nitric oxide

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

glycine betaine

choline

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

cadaverine

spermine

spermidine

putrescine

S-(hydroxymethyl)glutathione

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

all-trans-retinyl palmitate

cis-dienelactone

D-glucono-1,5-lactone

2-methylacetoacetyl-CoA

3'-dephospho-CoA

malonyl-CoA

succinyl-CoA

acetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

γ-butyrobetainyl-CoA

(S)-3-aminobutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

L-carnitinyl-CoA

crotonobetainyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

butanoyl-CoA

pentanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

ethene

heptadecane

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

nicotinate

riboflavin

thiamine

nicotinamide

L-carnitine

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxal

pyridoxine

pyridoxamine

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FMNH₂

FMN

FAD

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-8

ubiquinol-10

ubiquinol-6

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-10

cyclic-AMP

adenosine 3'-monophosphate

guanosine 3'-monophosphate

ppGpp

pppGpp

dAMP

dGMP

IMP

hypoxanthine

XMP

GMP

IDP

ITP

dIDP

dITP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dATP

dADP

dGTP

dGDP

ADP

GTP

GDP

ATP

adenylo-succinate

AMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

2'-deoxyguanosine

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

inosine

xanthosine

adenosine

guanosine

cytidine

uridine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

CTP

UTP

dCMP

dTMP

dUMP

UMP

CMP

dTDP

dCDP

dUDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cytidine-3'-monophosphate

uridine 3'-monophosphate

ADP-α-D-glucose

preQ₁

thymine

cytosine

uracil

guanine

adenine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-glucuronate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

CDP-4-dehydro-6-deoxy-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-3,6-dideoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-2

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

(S)-1-pyrroline-5-carboxylate

precorrin-2

precorrin-1

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

cyclic pyranopterin phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

orotate

quercetin

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

3-(hydroxymethyl)-5-methylphenol

3,5-xylenol

catechol

4-methylcatechol

2,3-dihydroxybenzoate

protocatechuate

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

trans-cinnamate

4-aminobenzoate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

diacetyl

methylglyoxal

glycolaldehyde

formaldehyde

acetaldehyde

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-ribopyranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-allofuranose

β-D-allopyranose

methanol

ethanol

glycerol

D-ribitol

galactitol 1-phosphate

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1-(β-D ribofuranosyl)nicotinamide

aldehydo-D-galacturonate

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-xylulose

L-ribulose

D-ribulose

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

keto-L-tagatose 6-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-arabinofuranose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

L-gulonate

D-gluconate

D-mannonate

D-altronate

D-galactonate

L-idonate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

iron(III) dicitrate

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

allantoate

(S)-(+)-allantoin

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

chorismate

L-aspartate

succinate

fumarate

(S)-malate

D-glucarate

D-galactarate

α,ω-9Z-octadecenedioate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

3-carboxy-cis,cis-muconate

cis-aconitate

trans-aconitate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

D-threo-isocitrate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

glyoxylate

2-oxoglutarate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

acetate

formate

(R)-lactate

(S)-lactate

butanoate

pentanoate

decanoate

octanoate

laurate

7-hydroxylaurate

4-hydroxybutanoate

gentisate

sophorosyloxydocosanoate

13-sophorosyloxydocosanoate 6',6''-diacetate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

(15Z)-tetracosenoate

oleate

palmitate

stearate

α-linolenate

linoleate

phytenate

(R)-pantoate

D-tagaturonate

carbamate

L-α-amino-ε-keto-pimelate

L-serine

glycine

L-asparagine

L-tyrosine

L-threonine

L-glutamine

L-cysteine

L-lysine

L-arginine

L-histidine

L-glutamate

L-proline

L-isoleucine

L-selenocysteine

L-valine

L-alanine

L-leucine

L-phenylalanine

L-tryptophan

L-methionine

β-alanine

D-glutamate

D-alanine

D-aspartate

L,L-diaminopimelate

L-ornithine

L-aspartyl-4-phosphate

L-cystathionine

N-carbamoyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

seleno-L-homocysteine

3-phospho-L-serine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

N-α-acetyl lysine methyl ester

O-acetyl-L-homoserine

L-citrulline

L-canaline

S-sulfo-L-cysteine

L-homoserine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

S-adenosyl-L-homocysteine

hypoglycin A

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine