an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S)-lactyl-2-diphospho-5'-guanosine

2-phosphoglycolate

glycolate

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

urea-1-carboxylate

β-D-ribosylnicotinate

O-ureido-L-homoserine

2-maleylacetate

prephytoene diphosphate

urea

octadecanal

nicotine-glucuronide

cotinine-glucuronide

N-acetyl-serotonin glucuronide

5-hydroxytryptophol glucuronide

L-thyroxine acyl β-D-glucuronide

L-thyroxine phenolic β-D-glucuronide

(2-hydroxyphenyl)acetate

homogentisate

oxalosuccinate

2-iminoacetate

N-ethylglycine

methylamine

3-phosphooxypyruvate

acetoacetate

hydrogenobyrinate a,c-diamide

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

(R)-pantothenate

(R)-4'-phosphopantothenate

porphobilinogen

preuroporphyrinogen

N⁵-carboxyaminoimidazole ribonucleotide

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

S-formylglutathione

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

canavaninosuccinate

L-canavanine

L-arginino-succinate

carbon monoxide

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

2-phenylethanol

2-methylbutanol

2-methylbutanal

3-methylbutanol

3-methylbutanal

isobutanol

indole-3-glycol

indole-3-glycol aldehyde

5-hydroxytryptophol

citrate

2-(α-hydroxyethyl)thiamine diphosphate

15-cis-4,4'-diapophytoene

(lipoyl)adenylate

thiamine diphosphate

D-erythro-imidazole-glycerol-phosphate

hydrogen selenide

2-dehydropantoate

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

lipid IV_A

lipid II_A

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

lipid X

lipid A disaccharide (E. coli)

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-keto-D-gluconate

presqualene diphosphate

squalene

hop-22(29)-ene

quinolinate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

pimeloyl-CoA

8-amino-7-oxononanoate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

5-methylcytosine

N-carbamoylputrescine

3-(3-hydroxyphenyl)propanoate

3-(2,3-dihydroxyphenyl)propanoate

dihydroxyacetone

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prephenate

oxaloacetate

O-acetyl-L-serine

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

γ-L-glutamyl 5-phosphate

α-ribazole 5'-phosphate

α-ribazole

3-hydroxyanthranilate

shikimate

N-acetylglutamyl-phosphate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

cotinine

carbamoyl phosphate

dihydrolipoamide

S-acetyldihydrolipoamide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

prenyl diphosphate

3-dehydroquinate

3-dehydroshikimate

(S)-2,3,4,5-tetrahydrodipicolinate

xanthine

(2S)-2-isopropylmalate

ethanolamine

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

(3R,6R)-1,3,4,6-tetrachlorocyclohexa-1,4-diene

(1S,4R)-2,4,5-trichloro-2,5-cyclohexadiene-1-diol

1,2-dichloroethane

2-chloroethanol

arsenite

N-methylhydantoin

4-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

acetyl phosphate

isopentenyl diphosphate

3-methyl-2-butenal

coproporphyrinogen III

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

3-deoxy-D-arabino-heptulosonate 7-phosphate

2-C-methyl-D-erythritol 4-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(E)-3-(methoxycarbonyl)pent-2-enedioate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

orotidine 5'-phosphate

adenosine 5'-phosphoselenate

7,8-diaminopelargonate

dethiobiotin

all-trans-13,14-dihydroretinol

hydroxyatrazine

N-isopropylammelide

ethylamine

(S)-dihydroorotate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

6-amino-2-oxohexanoate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

phosphoenolpyruvate

4'-phosphopantetheine

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

ammonia

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

4-oxoglutaramate

1-piperideine-2-carboxylate

1-piperideine 6-carboxylate

5-aminopentanoate

2-oxoglutaramate

N-acetyl-L-glutamate 5-semialdehyde

adenosine 3',5'-bisphosphate

H₂

4-hydroxy-2-nonenal

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

carbonic acid

4-imidazolone-5-propanoate

urocanate

glycerone phosphate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

L-arogenate

CO₂

hydrogen peroxide

glutathione disulfide

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

H₂O

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

1,5-anhydro-D-fructose

selenodiglutathione

glutathioselenol

5-oxo-L-proline

creatinine

N-Formyl-L-kynurenine

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

formamide

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

hydrogenobyrinate

mercuriphenyl acetate

chloroacetaldehyde

L-xylo-hex-3-ulono-1,4-lactone

2-dehydro-6-phospho-D-gluconate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

dialurate

(R)-1-amino-2-propanol O-2-phosphate

5,6-dimethylbenzimidazole

2-amino-3-carboxymuconate-6-semialdehyde

2-oxopent-4-enoate

α-D-glucosamine 1-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-amino-2-methyl-5-pyrimidinemethanol

palmitaldehyde

(2E)-hexadecenal

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

ADP-D-glycero-β-D-manno-heptose

2-dehydro-3-deoxy-D-gluconate 6-phosphate

N²-succinyl-L-glutamate 5-semialdehyde

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(S)-mandelate

(R)-mandelate

muconolactone

(+)-muconolactone

cis,cis-muconate

(indol-3-yl)pyruvate

α-D-glucopyranosyl-diphosphoundecaprenol

3-keto-L-gulonate 6-phosphate

salicyl alcohol

methylsalicylate

cyclohexane-1-carboxylate

cyclohexane-1-carbonyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4-phosphopantoate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

4-amino-4-deoxychorismate

1,4-dihydroxy-2-naphthoate

2,5-didehydro-D-gluconate

(L-threonylcarbamoyl)adenylate

hexulose 6-phosphate

(S)-2-amino-6-oxohexanoate

2-keto-L-gulonate

N²-succinylglutamate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

N-ethylmaleimide

N-ethylsuccinimide

5-carboxymethyl-2-hydroxymuconate

α-D-galactosyl-diphosphoundecaprenol

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

L-gulono-1,4-lactone

DNA without lesion

S-adenosyl 3-(methylsulfanyl)propylamine

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

cob(II)yrinate a,c-diamide

chlorophyll a

adenosylcobinamide-GDP

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

cobalt-precorrin-2

cobalt-sirohydrochlorin

magnesium-protoporphyrin IX 13-monomethyl ester

adenosylcobalamin 5'-phosphate

Mg-protoporphyrin

cobalt-precorrin-6B

cobalt-precorrin-7

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(I)inamide

adenosylcobinamide

chlorophyllide a

protochlorophyllide a

cob(II)yrinate c-monoamide

cobalt-factor III

cobalt-precorrin-3

cobalt-precorrin-8

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

cobyrinate

adenosylcobyrate

adenosyl-cobinamide phosphate

protoheme

N₂

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

(3Z)-phytochromobilin

(2R,3Z)-phycocyanobilin

pheophorbide a

pheophorbide b

pheophytin a

pheophytin b

Hg⁰

hydrogen sulfide

oxygen

S⁰

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

D-alanyl-D-lactate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

cyanophycin primer-L-aspartate

cyanophycin primer

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

2-iminobutanoate

2-iminopropanoate

2-iminosuccinate

superoxide

nitric oxide

monodehydroascorbate radical

hydroxyl radical

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

methionol

3-(methylsulfanyl)propanal

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

methanethiol

glutathione

thiocyanate

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

coenzyme M

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

3-(N-morpholino)propanesulfonate

isethionate

1-butanesulfonate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

Fe³⁺

Hg²⁺

Cu²⁺

Ca²⁺

Co²⁺

Mg²⁺

Fe²⁺

Cd²⁺

ammonium

K⁺

H⁺

trimethyl sulfonium

thiosulfate

selenate

hydrogensulfite

molybdate

nitrite

nitrate

hydrogencarbonate

sulfite

sulfate

OH^-

selenite

selenide

phosphate

triphosphate

diphosphate

chloride

bromide

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

agmatine

cadaverine

putrescine

spermidine

dehydrospermidine

tyramine

N-acetyl-serotonin

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

triiodothyroacetate ether glucuronide

3,3',5-triiodothyroacetate

triiodothyroacetate ester glucuronide

tetraiodothyroacetate ester glucuronide

tetraiodothyroacetate

tetraiodothyroacetate ether glucuronide

3,5,3'-triiodo-L-thyronine acyl β-D-glucuronide

3,5,3'-triiodo-L-thyronine

3,5,3'-triiodo-L-thyronine phenolic β-D-glucuronide

L-thyroxine

bromochloromethane

2,5-dichlorophenol

acetamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

ethene

heptadecane

(+)-7-epi-jasmonate

N⁶-dimethylallyladenine

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

4,4'-diapolycopenedioate glycosyl diester

malonyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

3'-dephospho-CoA

acetyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

phytenoyl-CoA

oleoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

decanoyl-CoA

octanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

acetoacetyl-CoA

all-trans-retinyl palmitate

trans-dienelactone

cis-dienelactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

mycophenolic acid phenolic glucuronide

mycophenolic acid O-acyl-glucuronide

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

ubiquinol-10

ubiquinol-7

ubiquinol-9

ubiquinol-8

menaquinol-8

menaquinol-9

demethylmenaquinol-8

demethylmenaquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-8

molybdopterin

(R)-lipoate

coenzyme A

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

riboflavin

L-ascorbate

nicotinate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxine

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

δ-tocotrienol

β-tocotrienol

γ-tocotrienol

α-tocotrienol

δ-tocopherol

β-tocopherol

γ-tocopherol

α-tocopherol

menadione

all-trans-retinol

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

precorrin-7

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-5

precorrin-4

precorrin-3B

precorrin-3A

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

guanine

adenine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

guanosine

xanthosine

adenosine

inosine

hypoxanthine

dGMP

dAMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

dUDP

dCDP

CDP

dCMP

cytosine

dUMP

dTTP

uracil

dTMP

dTDP

orotate

CTP

UTP

dCTP

dUTP

UDP

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-α-D-glucose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-α-D-paratose

CDP-α-tyvelose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

5-fluorouracil

uridine

cytidine

thymine

UMP

CMP

isoguanine

preQ₁

(+)-dihydromyricetin

(+)-taxifolin

(+)-dihydrokaempferol

(2R,3S,4S)-leucodelphinidin

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

baicalein

6,7-dehydrobaicalein

quercetin

3-O-methylquercetin

preQ₀

(indole-3-yl)acetonitrile

4-tyrosol

salicylaldehyde

benzene

urate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2-methyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol

2,3-dimethyl-6-phytyl-1,4-benzoquinol

2-methyl-6-phytyl-1,4-benzoquinol

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

4-methylphenol

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

catechol

protocatechuate

enterobactin

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

trans-cinnamate

salicylate

4-aminobenzoate

benzoate

chorismate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

4,4'-diapolycopenedioate

(4S)-4-hydroxy-2-oxoglutarate

fumarate

succinate

L-aspartate

(S)-malate

D-glucarate

cis-aconitate

trans-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

(R)-3-hydroxybutanoate

(R)-lactate

(S)-lactate

acetate

formate

pyruvate

propanoate

butanoate

decanoate

octanoate

(2E,6E)-farnesoate

3-oxoadipate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

linoleate

γ-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

phytenate

palmitate

pristanate

stearate

mycophenolate

(R)-pantoate

D-gluconate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-serine

N-carbamoylsarcosine

β-alanine

L-leucine

L-glutamine

L-alanine

L-proline

glycine

D-glutamate

L-glutamate

L-histidine

L-lysine

L-arginine

L-threonine

L-asparagine

L-tyrosine

L-cysteine

L-phenylalanine

L-tryptophan

D-alanine

D-lysine

S-sulfanyl-L-cysteine

2-hydroxy-5-oxoproline

L-aspartyl-4-phosphate

L-saccharopine

sarcosine

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

3-hydroxy-L-kynurenine

3-phospho-L-serine

L-citrulline

L-valine

L-isoleucine

S-sulfo-L-cysteine

L-ornithine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-homoserine

L-cystine

L-homocysteine

hypoglycin A

L-4-hydroxyglutamate semialdehyde

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-cystathionine

L,L-diaminopimelate

L-isoglutamine

methylglyoxal

diacetyl

(2E,6E)-farnesal

3-(N-morpholino)propanal

glycolaldehyde

isobutanal

1-propanal

1-octanal

formaldehyde

acetaldehyde

butan-1-al

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

L-sorbosone

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

propan-1-ol

ethanol

butan-1-ol

methanol

phytol

glycerol

D-sorbitol

L-iditol

myo-inositol

scyllo-inosose

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

torulene

apo-4'-lycopenal

15-cis-phytoene

all-trans-4,4'-diapolycopene

4,4'-diapolycopen-4,4'-dial

all-trans-3,4-didehydrolycopene

4'-apo-β-carotenal

geranyl diphosphate

(2E,6E)-farnesyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

oleanolate

oleanolate 3 β-D-glucuronoside

all-trans-4,4'-diaponeurosporene

all-trans-4,4'-diapo-ζ-carotene

all-trans-4,4'-diapophytofluene

phytyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

glucosyl-(heptosyl)₃-Kdo₂-lipid A-phosphate

glucosyl-(heptosyl)₃-glucosyluronate-Kdo₂-lipid A-phosphate

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

4'-α-L-Ara4N-α-Kdo-(2->4)-α-KDO-(2->6)-lipid IV_A

trans-3-hydroxycotinine-glucuronide

trans-3'-hydroxycotinine

(S)-nicotine

betanidin

betanidin quinone

iron(III) dicitrate

ferric-enterobactin complex

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltoheptaose

maltopentaose

maltohexaose

α-maltose

sucrose

1,5-anhydro-D-mannitol

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

keto-L-sorbose

keto-D-fructose

β-D-fructofuranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^G-phosphate

sucrose 6^F-phosphate

α-lactose 6'-phosphate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

L-ascorbate 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

adenylo-succinate

8-oxo-GTP

8-oxo-dGTP

5'-deoxyadenosine

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B