an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

prenyl diphosphate

salicyl alcohol

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

squalene

chlorate

5-aminolevulinate

hop-22(29)-ene

5-guanidino-2-oxopentanoate

porphobilinogen

pimelate

α-D-galactosyl-diphosphoundecaprenol

itaconate

4-pyridoxolactone

bisorganyltrisulfane

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

prephytoene diphosphate

(S)-ureidoglycolate

L-canavanine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

4-acetamidobutanal

(R)-4'-phosphopantothenoyl-L-cysteine

4-acetamidobutanoate

oxalate

CO₂

5-amino-6-(5-phospho-D-ribitylamino)uracil

carbamoyl phosphate

adenosine 5'-phosphoselenate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-amino-3-carboxymuconate-6-semialdehyde

5-hydroxyindole thiazolidine carboxylate

O-ureido-L-homoserine

canavaninosuccinate

α-ribazole

hydrogenobyrinate a,c-diamide

coproporphyrinogen III

enol-phenylpyruvate

L-arginino-succinate

3-methyl-2-butenal

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

quinolinate

acetyl phosphate

glycerone phosphate

5-phospho-β-D-ribosylamine

cis-coumarinic acid-β-D-glucoside

N¹-(5-phospho-β-D-ribosyl)glycinamide

hydrogen peroxide

4-hydroxybenzaldehyde

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

H₂O

(S)-dihydroorotate

4-amino-2-methyl-5-pyrimidinemethanol

benzoylsuccinyl-CoA

prephenate

(S)-4-amino-5-oxopentanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

5-oxo-L-proline

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

3-phosphooxypyruvate

N-(5-phosphoribosyl)-anthranilate

oxaloacetate

ethanolamine

adenosine 5'-phosphosulfate

coniferaldehyde

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

3'-phosphoadenylyl-sulfate

selenodiglutathione

glutathioselenol

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

3-deoxy-D-manno-octulosonate 8-phosphate

preuroporphyrinogen

3-deoxy-α-D-manno-2-octulosonate

4-coumaraldehyde

lipid IV_A

nigerose

pimeloyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

8-amino-7-oxononanoate

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

glutathione disulfide

4-amino-4-deoxychorismate

histidinal

histidinol

5-amino-6-(D-ribitylamino)uracil

oxalosuccinate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

5,6-dimethylbenzimidazole

(2R,3S)-3-isopropylmalate

2-dehydropantoate

(2S)-2-isopropyl-3-oxosuccinate

α-ribazole 5'-phosphate

4-methyl-2-oxopentanoate

citrate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

lipid X

1-deoxy-L-glycero-tetrulose 4-phosphate

lipid A disaccharide (E. coli)

(R)-2,3-dihydroxy-3-methylpentanoate

chloramphenicol

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(S)-2-aceto-2-hydroxybutanoate

N-succinyl-L,L-2,6-diaminopimelate

D-gluconate 6-phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(E)-2-benzylidenesuccinyl-CoA

2-C-methyl-D-erythritol 4-phosphate

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(S)-2-acetolactate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-keto-D-gluconate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

glycolate

dihydrolipoamide

5-hydroxytryptophol

acetoacetate

lipoamide

5-hydroxyindole acetaldehyde

3-dehydroshikimate

ammonia

N⁵-carboxyaminoimidazole ribonucleotide

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

chlorite

hydrogen selenide

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propionyl-CoA

(E)-4-coumaroyl-CoA

carbonic acid

H₂

aminoacetone

2-methylbutanol

6-phospho D-glucono-1,5-lactone

2-methylbutanal

presqualene diphosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-dehydro-3-deoxy-D-gluconate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

N²-succinyl-L-glutamate 5-semialdehyde

3-keto-β-D-galactose

N²-succinylglutamate

isobutanol

(S)-2,3,4,5-tetrahydrodipicolinate

formamide

N-succinyl-2-amino-6-ketopimelate

guanidinium

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

5-(methylsulfanyl)-ribulose 1-phosphate

indole-3-glycol

α-D-glucosamine 1-phosphate

indole-3-glycol aldehyde

shikimate

(R)-1-amino-2-propanol O-2-phosphate

3-methylbutanol

3-methylbutanal

anthranilate

phosphoenolpyruvate

hydroxypyruvate

orotidine 5'-phosphate

S-methyl-5'-thioadenosine

2-(α-hydroxyethyl)thiamine diphosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

3-methoxy-4-hydroxyphenylglycolaldehyde

N-carbamoylputrescine

carbon monoxide

(2S)-2-isopropylmalate

2-deoxygluconate

4,5-dihydroxyphthalate

3-dehydro-2-deoxy-D-gluconate

2-isopropylmaleate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

4'-phosphopantetheine

L-histidinol phosphate

2-iminoacetate

2-phenylethanol

thiamine phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

glutathionylspermidine

thiamine diphosphate

urea

urea-1-carboxylate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

3-oxopropanoate

(S)-5-hydroxyisourate

4-guanidinobutyramide

4-guanidinobutanoate

hydrogenobyrinate

methylsalicylate

2-maleylacetate

3-ureidopropanoate

acrylamide

shikimate 3-phosphate

O-acetyl-L-serine

acrylate

5-enolpyruvoyl-shikimate 3-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(indol-3-yl)acetamide

xanthine

isopentenyl diphosphate

all-trans-retinyl palmitate

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

itaconyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

isobutanoyl-CoA

trans-feruloyl-CoA

phenylacetyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

isovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

malonyl-CoA

succinyl-CoA

3'-dephospho-CoA

2-methylbutanoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

(2E)-dec-2-enoyl-CoA

(E)-cinnamoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

2-hydroxyphytanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-2-palmitoyl-phosphatidylglycerol

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranylgeranyl diphosphate

(2E,6E)-farnesyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

torulene

apo-4'-lycopenal

apo-4'-lycopenoate

15-cis-phytoene

all-trans-3,4-didehydrolycopene

all-trans phytofluene

4'-apo-β-carotenal

all-trans-retinol

α-Kdo-(2→6)-lipid IV_A

betanidin

betanidin quinone

coumarin

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

GDP-α-D-mannose

ADP-α-D-glucose

cyclic ADP-ribose

ADP-D-ribose

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactofuranose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

CMP-3-deoxy-β-D-manno-octulosonate

lotaustralin

neolinustatin

taxiphyllin

linustatin

linamarin

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

β-D-glucopyranose

α-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

L-ribulose

D-xylulose

glycolaldehyde

N-acetyl-β-D-glucosamine

4-deoxy-L-threo-hex-4-enopyranuronate

glycerol

galactitol

maltotriose

β-D-cellobiose

XXXG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XLLG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

raffinose

stachyose

maltotetraose

melibiose

lactose

α,α-trehalose

D-gluconate

D-altronate

D-mannonate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

2-oxoglutarate

glyoxylate

pyruvate

2-oxobutanoate

leukotriene-D4

leukotriene-E4

butanoate

octanoate

(3E,5Z)-tetradecadienoate

phytenate

palmitate

3-carboxy-cis,cis-muconate

cis-aconitate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

formate

acetate

propanoate

(S)-lactate

(R)-lactate

L-α-amino-ε-keto-pimelate

L-serine

L-tyrosine

glycine

L-threonine

L-glutamine

L-asparagine

L-cysteine

L-arginine

L-lysine

L-histidine

N^ω-hydroxy-L-arginine

L-glutamate

L-aspartate

β-alanine

(R)-3-amino-2-methylpropanoate

L-leucine

L-proline

L-alanine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

S-sulfanyl-L-cysteine

cis-4-hydroxy-D-proline

trans-4-hydroxy-L-proline

erythro-4-hydroxy-L-glutamate

S-methyl-L-methionine

3-phospho-L-serine

O-acetyl-L-homoserine

N-carbamoyl-L-aspartate

N-carbamoylglycine

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-glutamate

D-glutamate

D-alanine

L-tryptophan

L-phenylalanine

L-citrulline

L-aspartate 4-semialdehyde

L-ornithine

L-glutamate-5-semialdehyde

hypoglycin A

S-adenosyl-L-methionine

L-homoserine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-cystine

L-homocysteine

meso-diaminopimelate

L-isoleucine

L-valine

L-methionine

L,L-diaminopimelate

L-cystathionine

protocatechuate

salicylate

4-aminobenzoate

chorismate

succinate

fumarate

(S)-malate

(R)-pantoate

orotate

allantoate

D-tagaturonate

(S)-1-pyrroline-5-carboxylate

3-oxoadipate

3-(carbamoylamino)-2-methylpropanoate

(R)-glycerate

agmatine

cadaverine

dehydrospermidine

spermidine

glycine betaine

(2Z)-2-aminobut-2-enoate

2-iminosuccinate

2-octaprenylphenol

coenzyme A

molybdopterin

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

thiamine

riboflavin

nicotinate

nicotinamide

pyridoxal

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine

pyridoxamine

phenylacetate

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinone-8

Reactive Blue 5

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

Mg-protoporphyrin

cobyrinate

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

cob(I)inamide

adenosylcobinamide

cob(I)alamin

adenosylcobalamin

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

cobalt-precorrin-5A

cob(I)yrinate a,c-diamide

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

adenosyl-cobinamide phosphate

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

adenosylcobinamide-GDP

protochlorophyllide a

cobalt-precorrin-3

cobalt-precorrin-4

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-2

protoheme

benzyl alcohol

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

ethylene glycol

ethanol

butan-1-ol

methanol

propan-1-ol

phytol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 1-monophosphate

cyanophycin primer-L-aspartate

cyanophycin primer

L-Ala-D-Glu-meso-A₂pm

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

Fe³⁺

K⁺

H⁺

ammonium

Mg²⁺

Co²⁺

Fe²⁺

Mo²⁺

perchlorate

sulfite

selenate

hydrogensulfite

OH^-

molybdate

superoxide

selenite

hydrogencarbonate

sulfate

thiosulfate

phosphate

diphosphate

triphosphate

chloride

trimethyl sulfonium

S⁰

oxygen

hydrogen sulfide

chloramphenicol 3-acetate

2-chloroacetate

ethene

5,10-methenyltetrahydrofolate mono-L-glutamate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

3-(all-trans-octaprenyl)benzene-1,2-diol

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

XMP

8-oxo-dGTP

8-oxo-GTP

AMP

1-(5-phospho-β-D-ribosyl)-ATP

ADP

ATP

2'-deoxyadenosine

2'-deoxyinosine

GMP

IMP

adenylo-succinate

5'-deoxyadenosine

ITP

IDP

GTP

pppGpp

cyclic-AMP

GDP

ppGpp

dGDP

dGTP

dADP

dATP

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

hypoxanthine

5,6-dihydrothymine

5,6-dihydrouracil

cyclic di-3',5'-guanylate

dUDP

dCDP

dTDP

UDP

CDP

dUMP

dTMP

dCMP

UMP

CMP

dUTP

dCTP

dTTP

UTP

CTP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

2'-deoxyuridine

thymidine

2'-deoxycytidine

cytidine

uridine

adenosine

inosine

xanthosine

guanosine

thymine

uracil

cytosine

preQ₁

guanine

adenine

4-methylphenol

(S)-ureidoglycine

precorrin-2

precorrin-1

precorrin-4

precorrin-3A

precorrin-3B

precorrin-7

precorrin-8x

precorrin-6B

precorrin-5

precorrin-6A

sirohydrochlorin

hydantoin

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

hypoglycin B

2-methoxy-6-(all-trans-octaprenyl)phenol

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

hydroxyl radical

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

(indole-3-yl)acetonitrile

preQ₀

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

1-butanesulfonate

isethionate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

benzyl-6-hydroxy-2-cyclohexene-on-oyl

urate

cinnamaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

coumarinate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

diacetyl

methylglyoxal

butan-1-al

acetaldehyde

formaldehyde

1-octanal

1-propanal

isobutanal

(R)-lactaldehyde

(S)-lactaldehyde

phytenal