an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

DNA without lesion

ethanolamine

2-phosphoglycolate

glutathione disulfide

succinate semialdehyde

4-(γ-L-glutamylamino)butanoate

4-aminobutanoate

carbamoyl phosphate

dethiobiotin

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

lipid IV_A

thiamine phosphate

2-iminoacetate

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

propionamide

7-carboxy-7-deazaguanine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(S)-mandelate

(R)-mandelate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

3-deoxy-D-manno-octulosonate 8-phosphate

lipid X

lipid A disaccharide (E. coli)

methylamine

4-amino-4-deoxychorismate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-dihydroorotate

L-selenocystathionine

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

3-dehydroshikimate

ammonia

3'-phosphoadenylyl-sulfate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

L-β-lysine

hydrogen selenide

O-acetyl-L-serine

2-C-methyl-D-erythritol 4-phosphate

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

glycolate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

N-acetylglutamyl-phosphate

coproporphyrinogen III

carbonic acid

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(S)-2-amino-6-oxohexanoate

carboxynorspermidine

norspermidine

4-hydroxy-2-nonenal

2-chloroethanol

chloroacetaldehyde

N-carbamoylputrescine

2-oleoylglycerol

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

propanoyl phosphate

hydroxypyruvate

tartronate semialdehyde

1,2-benzoquinone

arsenite

shikimate 3-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

N-acetyl-L-glutamate 5-semialdehyde

D-erythro-imidazole-glycerol-phosphate

O-ureido-L-homoserine

(R)-pantothenate

canavaninosuccinate

L-canavanine

L-arginino-succinate

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

prephenate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

hydrogen peroxide

β-nicotinate D-ribonucleotide

quinolinate

5-enolpyruvoyl-shikimate 3-phosphate

α-D-glucosamine 1-phosphate

5-aminolevulinate

porphobilinogen

imidazole acetol-phosphate

L-histidinol phosphate

3-mercaptopyruvate

3-oxopropanoate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

phosphoenolpyruvate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

N-(5-phosphoribosyl)-anthranilate

anthranilate

oxaloacetate

citrate

5-phospho-β-D-ribosylamine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

oxalosuccinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

(2S)-2-isopropylmalate

glycerone phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

isopentenyl diphosphate

nicotinate adenine dinucleotide

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

γ-L-glutamyl 5-phosphate

CO₂

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

enol-phenylpyruvate

5-hydroxyindole thiazolidine carboxylate

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

4-oxoglutaramate

1-piperideine 6-carboxylate

urea

butanoyl phosphate

L-dehydro-ascorbate

α-D-galacturonate 1-phosphate

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

octadecanal

selenodiglutathione

glutathioselenol

2-amino-3-carboxymuconate-6-semialdehyde

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

4-amino-2-methyl-5-pyrimidinemethanol

acetoacetate

4-imidazolone-5-propanoate

urocanate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

acetyl phosphate

dialurate

N-succinyl-L,L-2,6-diaminopimelate

(S)-4-amino-5-oxopentanoate

histidinal

histidinol

preuroporphyrinogen

(lipoyl)adenylate

shikimate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

itaconate

β-D-ribosylnicotinate

5-oxo-L-proline

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-androstene-3,17-dione

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

orotidine 5'-phosphate

3-deoxy-α-D-manno-2-octulosonate

pimeloyl-CoA

citraconate

(2R,3S)-3-methylmalate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol

indole-3-glycol aldehyde

isobutanol

3-methylbutanol

3-methylbutanal

2-methylbutanol

2-methylbutanal

2-phenylethanol

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

N-ethylglycine

ethylamine

3-hydroxypropanoate

2-dehydropantoate

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

(R)-1-amino-2-propanol O-2-phosphate

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

nigerose

H₂

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

L-homocysteine

4-methylphenol

nitric oxide

superoxide

monodehydroascorbate radical

hydroxyl radical

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

S-(hydroxymethyl)glutathione

dimethyl sulfide

methionol

3-(methylsulfanyl)propanal

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

taurine

(R)-S-lactoylglutathione

thiosulfate

nitrate

sulfate

sulfite

nitrite

hydrogencarbonate

selenate

hydrogensulfite

OH^-

selenite

molybdate

phosphonate

phosphate

triphosphate

diphosphate

chloride

Fe³⁺

Fe²⁺

Mo²⁺

Ni²⁺

Co²⁺

H⁺

ammonium

trimethyl sulfonium

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

putrescine

spermidine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-iminosuccinate

2-iminobutanoate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

2-chloroacetate

acetamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

nicotinamide

heptadecane

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

(25S)-26-oxocholest-4-en-3-one

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

pregnenolone

estrone

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-β-hydroxyandrost-5-en-17-one

cholesterol

cholest-5-en-3-one

17-α-hydroxypregnenolone

(+)-7-epi-jasmonate

(indol-3-yl)acetate

phenylacetate

(2E,6E)-farnesyl diphosphate

pristanate

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-cis, 3-oxo-tridecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

(2R,3S)-β-methylmalyl-CoA

3-hydroxyisovaleryl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

acetyl-CoA

2-methylbutanoyl-CoA

(S)-3-aminobutanoyl-CoA

phenylacetyl-CoA

dihomo γ-linolenoyl-CoA

itaconyl-CoA

(+)-7-epi-jasmonoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

L-galactono-1,4-lactone

D-glucono-1,5-lactone

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

ubiquinol-10

ubiquinol-7

ubiquinol-9

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-8

(R)-lipoate

coenzyme A

molybdopterin

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

5,10-methenyltetrahydromethanopterin

tetrahydromethanopterin

5-formyl-tetrahydromethanopterin

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

nicotinate

riboflavin

thiamine

L-ascorbate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxine

pyridoxamine

pyridoxal

menadione

all-trans-retinoate

all-trans-retinal

(S)-1-pyrroline-5-carboxylate

precorrin-3B

precorrin-4

precorrin-2

precorrin-3A

cobalt-precorrin-3

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-5B

cobalt-precorrin-4

cobalt-precorrin-5A

precorrin-1

precorrin-6A

precorrin-5

precorrin-6B

precorrin-7

cobalt-precorrin-6B

cobalt-precorrin-6A

precorrin-8x

cobyrinate

sirohydrochlorin

cob(I)alamin

adenosylcobalamin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydroneopterin 2',3'-cyclic phosphate

cyclic pyranopterin phosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyguanosine

2'-deoxyadenosine

adenosine

xanthosine

inosine

guanosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

ITP

GTP

ATP

orotate

dCMP

dUTP

dTDP

dTTP

dCTP

UTP

CTP

dUDP

dCDP

CDP

UDP

dUMP

dTMP

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

uridine

cytidine

CMP

UMP

isoguanine

preQ₁

baicalein

6,7-dehydrobaicalein

quercetin

(indole-3-yl)acetonitrile

preQ₀

hydrogen cyanide

acrylonitrile

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

benzyl alcohol

salicylaldehyde

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

catechol

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

enterobactin

cis-caffeate

salicylate

4-aminobenzoate

benzoate

geranate

chorismate

L-aspartate

fumarate

succinate

(S)-malate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

(R)-glycerate

propanoate

formate

acetate

pyruvate

butanoate

decanoate

heptanoate

octanoate

(15Z)-tetracosenoate

oleate

(3E,5Z)-tetradecadienoate

linoleate

di-homo-γ-linolenate

γ-linolenate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

apo-4'-lycopenoate

phytenate

stearate

palmitate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

(R)-pantoate

D-gluconate

aldehydo-D-galacturonate

aldehydo-D-glucuronate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

L-tyrosine

glycine

L-asparagine

L-cysteine

L-threonine

L-glutamine

L-serine

L-lysine

L-arginine

L-histidine

L-glutamate

L-phenylalanine

L-tryptophan

D-alanine

D-glutamate

seleno-L-homocysteine

L-saccharopine

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

L-citrulline

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-ornithine

O-phospho-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

L-canaline

1-aminocyclopropane-1-carboxylate

hypoglycin A

O-succinyl-L-homoserine

L-homoserine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-proline

L-alanine

L-valine

L-leucine

L-isoleucine

L-methionine

L-cystathionine

L-isoglutamine

L,L-diaminopimelate

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

methylglyoxal

diacetyl

(2Z)-3-(3,4-dioxocyclohexa-1,5-dien-1-yl)prop-2-enoate

glycolaldehyde

1-octanal

1-heptanal

isobutanal

acetaldehyde

formaldehyde

butan-1-al

1-propanal

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

geranial

D-glyceraldehyde

L-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-galactopyranose

α-L-arabinopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

ethanol

methanol

butan-1-ol

propan-1-ol

phytol

glycerol

D-mannitol

galactitol

(R)-propane-1,2-diol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

apo-4'-lycopenal

zeinoxanthin

α-carotene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

3-oxo-24-ethyl-26-al-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oate

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-ene

sitosterol

3-oxo-24-ethyl-cholest-5-ene

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

betanidin

betanidin quinone

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

sucrose

α,α-trehalose

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

aldehydo-L-galactonate

L-gulonate

1-(5-phospho-β-D-ribosyl)-AMP

pppGpp

ppGpp

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

5'-deoxyadenosine

8-oxo-GTP

8-oxo-dGTP

cyclic-GMP

2-hydroxy-dATP

5-hydroxy-CTP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

cob(I)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobalt-factor III

cobalt-sirohydrochlorin

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

protoheme

N₂

nitrous oxide

protoporphyrinogen IX

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

oxygen

hydrogen sulfide

S⁰

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol