an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

CO₂

oxaloacetate

ethanolamine

N-acetyl-L-glutamate 5-semialdehyde

(S)-dihydroorotate

O-acetyl-L-serine

hydrogen selenide

lipid A disaccharide (E. coli)

lipid X

hydrogen peroxide

aminoacetone

5-aminopentanal

phosphoenolpyruvate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

3-dehydroshikimate

shikimate

α-D-glucosamine 1-phosphate

glycerone phosphate

preuroporphyrinogen

porphobilinogen

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prenyl diphosphate

(S)-4-hydroxy-2-oxopentanoate

3-phosphooxypyruvate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

2-maleylacetate

(R)-pantothenate

2-dehydropantoate

3-methyl-2-oxobutanoate

carbamoyl phosphate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

carbonic acid

sym-homospermidine

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

coproporphyrinogen III

(S)-4-amino-5-oxopentanoate

isopentenyl diphosphate

acetoacetate

5-enolpyruvoyl-shikimate 3-phosphate

glycolate

2-phosphoglycolate

4-fumaryl-acetoacetate

4-maleyl-acetoacetate

homogentisate

(2-hydroxyphenyl)acetate

acetyl phosphate

butanoyl phosphate

O-phosphoethanolamine

palmitaldehyde

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

(R)-mevalonate

L-histidinol phosphate

imidazole acetol-phosphate

xanthine

4-hydroxy-2-nonenal

cis,cis-muconate

muconolactone

(+)-muconolactone

3-deoxy-α-D-manno-2-octulosonate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

lipid IV_A

5-aminolevulinate

anthranilate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

3-demethylubiquinol-6

citrate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-dehydro-2-deoxy-D-gluconate 6-phosphate

5-dehydro-2-deoxy-D-gluconate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

methylamine

ethylamine

N-ethylglycine

2-iminoacetate

S-acetyldihydrolipoamide

dihydrolipoamide

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

4-amino-4-deoxychorismate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

dethiobiotin

7,8-diaminopelargonate

8-amino-7-oxononanoate

pimeloyl-CoA

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

orotidine 5'-phosphate

shikimate 3-phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

urocanate

4-imidazolone-5-propanoate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

nicotinate adenine dinucleotide

N-(5-phosphoribosyl)-anthranilate

histidinol

histidinal

1,6-anhydro-N-acetyl-β-muramate

3-deoxy-D-manno-octulosonate 8-phosphate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

3-amino-1-hydroxyacetone 1-phosphate

3-dehydroquinate

(R)-4'-phosphopantothenate

L-selenocystathionine

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

oxalosuccinate

quinolinate

formamide

indole-3-ethanol

glutathione disulfide

L-arginino-succinate

L-canavanine

canavaninosuccinate

O-ureido-L-homoserine

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

L-β-lysine

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

phenylglyoxylate

4-hydroxybenzaldehyde

2-(4-hydroxyphenyl)-2-oxoacetate

N-carbamoylputrescine

N-ethylsuccinimide

N-ethylmaleimide

DNA without lesion

H₂

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

malonate

N6'-acetylkanamycin-B

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

urea

4-oxoglutaramate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

ammonia

5-hydroxyindole thiazolidine carboxylate

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(5R)-5-benzyl-hydantoin

(5S)-5-benzyl-hydantoin

coenzyme F₃₉₀-A

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

5-methylcytosine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

dimethylamine

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

phosphocholine

D-erythro-imidazole-glycerol-phosphate

tryptamine

5-methoxyindoleacetaldehyde

5-methoxytryptamine

3-methyl-2-butenal

N-succinyl-L,L-2,6-diaminopimelate

nicotine-1'-N-oxide

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

methylsalicylate

salicyl alcohol

pyrazine-2-carboxylate

arsenite

carbon monoxide

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

γ-butyrobetaine

chloramphenicol

3'-phosphoadenylyl-sulfate

octopamine

(4-hydroxyphenyl)acetate

(R)-synephrine

N-acetylglutamyl-phosphate

mercuriphenyl acetate

glutathioselenol

selenodiglutathione

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

N-acetyl-D-muramate 6-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

4-carboxy-2-hydroxypenta-2,4-dienoate

(3S,5S)-3,5-diaminohexanoate

(S)-5-amino-3-oxohexanoate

N⁵-carboxyaminoimidazole ribonucleotide

2-oxopent-4-enoate

5-oxo-L-proline

2-amino-3-carboxymuconate-6-semialdehyde

3-hydroxyanthranilate

N-Formyl-L-kynurenine

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

L-dehydro-ascorbate

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

hypoglycin B

L-kynurenine

L-α-amino-ε-keto-pimelate

L-methionine

L-selenocysteine

glycine

L-phenylalanine

L-alanine

L-leucine

L-proline

L-cysteine

L-tryptophan

L-isoleucine

L-valine

L-serine

L-glutamate

L-glutamine

L-asparagine

L-aspartate

L-threonine

L-tyrosine

L-aspartyl-4-phosphate

L-ornithine

L-arginine

L-lysine

L-histidine

L-cystathionine

L,L-diaminopimelate

L-isoglutamine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-formimino-L-glutamate

N-formyl-L-methionine

N⁶,N⁶-dimethyl-L-arginine

L-citrulline

S-sulfo-L-cysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homocysteine

O-phospho-L-homoserine

1-aminocyclopropane-1-carboxylate

hypoglycin A

L-4-hydroxyglutamate semialdehyde

L-glutamate-5-semialdehyde

L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

3-phospho-L-serine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

D-glutamate

D-alanine

β-alanine

(S)-3-amino-2-methylpropanoate

ADP

ATP

AMP

GDP

GMP

IMP

GTP

XMP

5'-deoxyadenosine

ppGpp

pppGpp

2'-deoxyguanosine

dGTP

dADP

dGDP

cyclic-AMP

dATP

ITP

IDP

dITP

dIDP

hypoxanthine

2'-deoxyadenosine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

dAMP

8-oxo-dGMP

8-oxo-dGTP

dGMP

adenylo-succinate

cyclic-GMP

isoguanine

8-oxo-GTP

CDP-choline

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-α-D-mannose

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

guanine

adenine

uracil

thymine

cytosine

preQ₁

cyclic di-3',5'-guanylate

dTMP

dUMP

dCMP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

UDP

CDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

UTP

CTP

CMP

UMP

NAD⁺

NADP⁺

NADH

NADPH

5-hydroxy-CTP

2-hydroxy-dATP

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosine

xanthosine

inosine

guanosine

uridine

cytidine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

5-fluorouracil

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

D-gluconate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

kanamycin B

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

β-D-fructofuranose

glycolaldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

β-D-cellobiose

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

sucrose

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

(S)-nicotine

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-nonaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

dopamine

(R)-adrenaline

(R)-noradrenaline

catechol

protocatechuate

ethylene glycol

phytosphingosine 1-phosphate

sphinganine 1-phosphate

1-octanol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

fluoroacetaldehyde

methylglyoxal

phenylacetaldehyde

(4-hydroxyphenyl)acetaldehyde

benzaldehyde

phytenal

acetaldehyde

1-propanal

isobutanal

formaldehyde

1-octanal

butan-1-al

acetone

a coenzyme-A group

pyruvate

2-oxoglutarate

glyoxylate

2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

vanillate

5-carboxyvanillate

salicylate

OH-DDVA meta-cleavage product

2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl

5,5'-dehydrodivanillate

4-aminobenzoate

benzoate

acetate

(R)-pantoate

orotate

5-deoxy-D-glucuronate

L-carnitine

fluoroacetate

(S)-1-pyrroline-5-carboxylate

octanoate

decanoate

palmitate

butanoate

stearate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

(3E,5Z)-tetradecadienoate

di-homo-γ-linolenate

(15Z)-tetracosenoate

phytenate

(2E,6E)-farnesoate

3-oxoadipate

formate

propanoate

(R)-lactate

(2R,3S)-2-methylisocitrate

(R)-3-hydroxybutanoate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

D-glucarate

fumarate

succinate

(S)-malate

4-tyrosol

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

benzene

urate

2-phenylethylamine

tyramine

serotonin

phenol

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

demethylmenaquinol-8

menaquinol-8

ubiquinol-9

ubiquinol-8

ubiquinol-6

ubiquinol-7

ubiquinol-10

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

metanephrine

normetanephrine

(indole-3-yl)acetonitrile

hydrogen cyanide

preQ₀

acrylonitrile

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

riboflavin

FMN

FAD

FMNH₂

reduced riboflavin

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

cob(II)alamin

aquacobalamin

cobyrinate

sirohydrochlorin

precorrin-2

precorrin-1

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-precorrin-3

thiamine

L-ascorbate

nicotinate

nicotinamide

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxine

pyridoxal

pyridoxamine

coenzyme A

oxidized coenzyme F₄₂₀-2

(R)-NADHX

(S)-NADHX

glycine betaine

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

acetyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3'-dephospho-CoA

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-hydroxybenzoyl-CoA

dihomo γ-linolenoyl-CoA

(E)-glutaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

L-carnitinyl-CoA

γ-butyrobetainyl-CoA

crotonobetainyl-CoA

phenylacetyl-CoA

isobutanoyl-CoA

(S)-3-aminobutanoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxooctadecanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

butanoyl-CoA

propanoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

androsterone

pregnenolone

testosterone

progesterone

campest-4-en-3-one

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

N⁶-dimethylallyladenine

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

17-α-hydroxypregnenolone

cholest-5-en-3-one

cholesterol

3-β-hydroxyandrost-5-en-17-one

cholate

glycocholate

isocholate

3-dehydrocholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

pyrazinamide

acetamide

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

betaine aldehyde

choline

betaine aldehyde hydrate

agmatine

cadaverine

putrescine

spermidine

N-acetylputrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Co²⁺

Cd²⁺

Ca²⁺

Hg²⁺

Fe²⁺

Cu²⁺

ammonium

H⁺

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

thiocyanate

S-sulfanylglutathione

2-iminobutanoate

2-iminosuccinate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

chloramphenicol 3-acetate

hydroxyl radical

monodehydroascorbate radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

S⁰

oxygen

hydrogen sulfide

Hg⁰

uroporphyrinogen-III

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrin IX

(Z,Z)-biliverdin-IX α

siroheme

protoheme

cobalt-sirohydrochlorin

cobalt-factor III

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal