an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

aminoacetone

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

ammonia

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

H₂O

2-dehydro-3-deoxy-D-gluconate

hydrogen peroxide

CO₂

acetyl phosphate

dihydroxyacetone

(R)-pantothenate

2-dehydropantoate

3-methyl-2-oxobutanoate

glycerone phosphate

3-dehydroshikimate

3-dehydroquinate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

acetoacetate

oxaloacetate

5-amino-6-(D-ribitylamino)uracil

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(S)-dihydroorotate

selenophosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

phosphoenolpyruvate

carbonic acid

6-phospho D-glucono-1,5-lactone

CDP-glycerol

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

succinate semialdehyde

2-keto-D-gluconate

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

ethanolamine

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-D-muramate 6-phosphate

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methoxy-4-hydroxyphenylglycolaldehyde

indole-3-glycol aldehyde

indole-3-glycol

isobutanol

3-methylbutanal

3-methylbutanol

2-methylbutanal

2-methylbutanol

2-phenylethanol

(R)-4'-phosphopantothenate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-phosphooxypyruvate

(R)-2,3-dihydroxy-3-methylpentanoate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

urea

4-imidazoleacetate

imidazole acetaldehyde

5-hydroxyindole acetate

3,4-dihydroxyphenylacetaldehyde

propynoate

prop-2-ynal

D-glucurono-6,3-lactone

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

shikimate 3-phosphate

shikimate

salicyl alcohol

methylsalicylate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

xanthine

isochorismate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

pseudouridine 5'-phosphate

citrate

prephenate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

S-ribosyl-L-homocysteine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

coproporphyrinogen III

isopentenyl diphosphate

butanoyl phosphate

5-enolpyruvoyl-shikimate 3-phosphate

L-histidinol phosphate

imidazole acetol-phosphate

N-acetylmuramoyl-L-ala-D-glu

N-acetylmuramoyl-L-ala-D-glu-(L)-meso-diaminopimelate -(L)-D-ala

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

O-acetyl-L-serine

hydrogen selenide

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

prenyl diphosphate

orotidine 5'-phosphate

carbamoyl phosphate

4'-phosphopantetheine

4-aminobutanoate

3-oxopropanoate

L-selenocystathionine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

γ-L-glutamyl 5-phosphate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

S-adenosyl 3-(methylsulfanyl)propylamine

4-hydroxy-2-nonenal

indole-3-ethanol

3-hydroxyanthranilate

anthranilate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-dehydro-D-gluconate

2-hydroxy-3-oxosuccinate

L-tartrate

meso-tartrate

thiamine phosphate

glutathione disulfide

histidinol

histidinal

N-(5-phosphoribosyl)-anthranilate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

pregn-5-ene-3,20-dione-17-ol

pregn-5-ene-3,20-dione

5-androstene-3,17-dione

(R)-mevalonate

N²-succinylglutamate

N²-succinyl-L-glutamate 5-semialdehyde

cis,cis-muconate

(+)-muconolactone

muconolactone

(4-hydroxyphenyl)acetate

glycolate

hexulose 6-phosphate

3-hydroxybenzaldehyde

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

4-methylbenzyl alcohol

3-methylbenzaldehyde

3-methylbenzyl alcohol

(indol-3-yl)pyruvate

DNA without lesion

prephytoene diphosphate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

arsenite

propionamide

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

hydroxypyruvate

1,4-dihydroxy-2-naphthoate

2-dehydro-3-deoxy-D-galactonate

2-phosphoglycolate

(S)-2,3-dihydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

5-guanidino-2-oxopentanoate

(lipoyl)adenylate

autoinducer 2

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

cyclohexanone

cyclohexanol

(L-aspartyl)adenylate

(2,3-dihydroxybenzoyl)adenylate

N-Formyl-L-kynurenine

6-aminohexanoate linear dimer

6-aminohexanoate cyclic dimer

4-amino-4-deoxychorismate

(E)-2-benzylidenesuccinyl-CoA

2,3,5,6-tetracholorophenol

D-erythro-imidazole-glycerol-phosphate

ectoine

(2S)-4-acetamido-2-aminobutanoate

5-amino-6-(5-phospho-D-ribosylamino)uracil

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

2,5-didehydro-D-gluconate

2-keto-L-gulonate

(R)-mevalonate diphosphate

(R)-5-phosphomevalonate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(5-phospho-D-ribitylamino)uracil

4-amino-2-methyl-5-pyrimidinemethanol

α-D-glucosamine 1-phosphate

2-maleylacetate

gallate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

3-hydroxy-5-oxohexanoate

3-hydroxy-5- oxohexanoyl-CoA

adipate

6-oxohexanoate

6-aminohexanoate

2-amino-3-carboxymuconate-6-semialdehyde

carbon monoxide

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

N-succinyl-L,L-2,6-diaminopimelate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-iminoacetate

tartronate semialdehyde

octopamine

methylamine

(R)-synephrine

H₂

oxalosuccinate

(S)-ureidoglycolate

quinolinate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(R)-4'-phosphopantothenoyl-L-cysteine

glutathioselenol

selenodiglutathione

pseudouridine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(2E,6E)-farnesol

(2E,6E)-farnesyl diphosphate

pristanate

progesterone

campesterol

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

cholest-4-en-3-one

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

17-α-hydroxyprogesterone

cholest-5-en-3-one

campest-4-en-3β-ol

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

allantoate

nicotinamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(S)-(+)-allantoin

6-caprolactam

acetamide

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2-chloromaleylacetate

3-chlorobenzaldehyde

3-chlorobenzyl alcohol

2-imino-3-(indol-3-yl)propanoate

pentachlorophenol

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

fluoroacetate

fluoroacetaldehyde

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycine betaine

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

tyramine

agmatine

putrescine

spermine

spermidine

cadaverine

N-acetylputrescine

N¹-acetylspermine

N¹-acetylspermidine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

4-[(E)-2-(methylamino)ethenyl]phenol

4-[(Z)-2-aminoethenyl]phenol

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

OH^-

nitrate

hydrogensulfite

hydrogencarbonate

superoxide

phosphate

diphosphate

triphosphate

chloride

Fe³⁺

Cr⁶⁺

Cr³⁺

Co²⁺

Cd²⁺

Cu²⁺

Fe²⁺

H⁺

ammonium

S-(hydroxymethyl)glutathione

3-(methylsulfanyl)propanal

methionol

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

hydroxyl radical

monodehydroascorbate radical

nitric oxide

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

dTDP-4-amino-4,6-dideoxy-α-D-galactose

1-oleoyl-2-lyso-glycerone phosphate

(S)-ureidoglycine

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

uroporphyrinogen-III

protoporphyrinogen IX

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

hydrogen cyanide

nitrous oxide

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-cysteinylglycine

meso-diaminopimeloyl-alanine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-homocysteine

hippurate

4-methylphenol

2-iminobutanoate

4-[(2Z)-2-(methylimino)ethyl]phenol

4-(2-iminoethyl)phenol

2-iminosuccinate

hypoglycin B

L-α-amino-ε-keto-pimelate

L-kynurenine

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

seleno-L-homocysteine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N,N-dimethylglycine

3-phospho-L-serine

D-lysine

D-alanine

D-glutamate

D-ornithine

D-proline

D-aspartate

L-phenylalanine

L-tyrosine

L-histidine

L-tryptophan

L-cysteine

L-glutamine

glycine

L-serine

L-threonine

L-asparagine

L-aspartate

L-glutamate

L-arginine

L-lysine

N^ω-hydroxy-L-arginine

L-alanine

L-proline

L-leucine

β-alanine

(S)-3-amino-2-methylpropanoate

L-isoleucine

L-valine

L-selenocysteine

L-methionine

L-cystathionine

L,L-diaminopimelate

L-ornithine

L-2,4-diaminobutanoate

L-citrulline

hypoglycin A

O-succinyl-L-homoserine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

S-adenosyl-L-homocysteine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

meso-diaminopimelate

isoguanine

8-oxo-dGTP

8-oxo-GTP

GDP

adenylo-succinate

IMP

GTP

AMP

ATP

ADP

dADP

dGDP

2'-deoxyadenosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyinosine

dATP

dGTP

ppGpp

pppGpp

ITP

IDP

dITP

dIDP

5'-deoxyadenosine

GMP

XMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

dGMP

dAMP

ADP-α-D-glucose

GDP-α-D-mannose

GDP-α-D-glucose

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

NADP⁺

NAD⁺

NADPH

NADH

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

preQ₁

adenine

guanine

uracil

thymine

dUMP

dTMP

dCMP

dCDP

dUDP

dTDP

dTTP

dCTP

dUTP

CDP

UDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

5-hydroxy-CTP

2-hydroxy-dATP

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosine

inosine

guanosine

xanthosine

cytidine

uridine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

aldehydo-L-galactonate

D-mannonate

D-gluconate

D-galactonate

L-idonate

D-altronate

L-gulonate

5-dehydro-4-deoxy-D-glucuronate

β-D-cellobiose

maltotriose

sucrose

maltohexaose

maltoheptaose

maltopentaose

maltotetraose

aldehydo-D-galacturonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

lotaustralin

taxiphyllin

linamarin

linustatin

neolinustatin

arbutin-6-phosphate

salicin 6-phosphate

methyl β-D-glucoside 6-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

sucrose 6^F-phosphate

β-D-cellobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

glycerol

D-mannitol 1-phosphate

L-iditol

D-sorbitol

galactitol

β-D-fructofuranose

β-L-rhamnopyranose

α-L-rhamnopyranose

keto-L-sorbose

keto-D-fructose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

L-glyceraldehyde

D-glyceraldehyde

glycolaldehyde

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

β-D-galactopyranose

α-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

L-ribulose

D-xylulose

keto-L-rhamnulose

5-deoxy-dihydrokalafungin

(S)-DNPA

salicylaldehyde

all-trans-retinol

all-trans-retinyl palmitate

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

apo-4'-lycopenoate

betanidin quinone

betanidin

4-methylumbelliferone

coumarin

scopoletin

(5E)-3-oxo-dodec-5-enoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-undecenoyl-CoA

4-cis-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

dioleoyl phosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

benzyl alcohol

myo-inositol

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

hydroquinone

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

3,4-dihydroxymandelate

2,3-dihydroxybenzoate

dopamine

ethylene glycol

ethanol

propan-1-ol

phytol

butan-1-ol

methanol

(2E,6E)-farnesal

methylglyoxal

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

4-methylbenzaldehyde

phytenal

(R)-lactaldehyde

(S)-lactaldehyde

acetaldehyde

formaldehyde

1-propanal

isobutanal

1-octanal

butan-1-al

diacetyl

4-hydroxyacetophenone

2',4,4',6'-tetrahydroxychalcone

caldariellaquinone

a coenzyme-A group

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

acetate

(R)-pantoate

orotate

D-tagaturonate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

butanoate

octanoate

palmitate

decanoate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

oleate

linoleate

γ-linolenate

(3E,5Z)-tetradecadienoate

phytenate

(15Z)-tetracosenoate

(2E,6E)-farnesoate

leukotriene-D4

leukotriene-E4

3-oxoadipate

pyruvate

formate

propanoate

(S)-lactate

(R)-lactate

4-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(R)-3-hydroxybutanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

cis-aconitate

D-threo-isocitrate

chorismate

D-glucarate

fumarate

succinate

(S)-malate

2-oxoglutarate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

salicylate

4-aminobenzoate

benzoate

3-hydroxybenzoate

4-methylbenzoate

4-tyrosol

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

S-1-(4-hydroxyphenyl)-ethanol

2,3,5,6-tetrachlorohydroquinone

2,3,6-trichlorohydroquinone

2,6-dichlorohydroquinone

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-7

demethylmenaquinol-8

menaquinol-7

menaquinol-8

ubiquinol-8

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-methoxy-4-hydroxyphenylglycol

vanillyl mandelate

coumarinate

6,7-dehydrobaicalein

baicalein

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

FMN

FAD

FMNH₂

FADH₂

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

sirohydrochlorin

precorrin-2

precorrin-1

dipicolinate

L-ascorbate

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

coenzyme A

(R)-lipoate

(R)-NADHX

(S)-NADHX

D-glucono-1,5-lactone

L-galactono-1,4-lactone

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

acetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

malonyl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

succinyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

isovaleryl-CoA

(2E,5Z)-tetradecenoyl-CoA

4-hydroxybutanoyl-CoA

phenylacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

pristanoyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

lauroyl-CoA

propanoyl-CoA

butanoyl-CoA

cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

2-carboxy-cerotoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA